| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 5309 | HQ1456A | NP0536A | VNG0159 | Hut0689 | rrnAC2550 | Hmu0279 | hla2669 | HVO_0551 | Hbo0979 |
| 3270 | HQ1456A | 5696 | 2564 | 2322 | 2674 | 2647 | 2797 | 2672 | 2864 | 2968 |
| 3417 | NP0536A | 2564 | 5333 | 2395 | 2767 | 2924 | 2819 | 2666 | 2814 | 2781 |
| 2998 | VNG0159 | 2322 | 2395 | 4887 | 2497 | 2545 | 2545 | 2609 | 2616 | 2586 |
| 3517 | Hut0689 | 2674 | 2767 | 2497 | 5249 | 3107 | 3056 | 2730 | 2841 | 2863 |
| 3723 | rrnAC2550 | 2647 | 2924 | 2545 | 3107 | 5593 | 3538 | 2775 | 2906 | 3112 |
| 3797 | Hmu0279 | 2797 | 2819 | 2545 | 3056 | 3538 | 5277 | 2835 | 3071 | 3110 |
| 3492 | hla2669 | 2672 | 2666 | 2609 | 2730 | 2775 | 2835 | 5781 | 3099 | 3297 |
| 3791 | HVO_0551 | 2864 | 2814 | 2616 | 2841 | 2906 | 3071 | 3099 | 5511 | 3723 |
| 3967 | Hbo0979 | 2968 | 2781 | 2586 | 2863 | 3112 | 3110 | 3297 | 3723 | 5867 |
852 symbols consensus ----------------------------MMPEIRALDDATVERIAAGEVVERPASVVKEL #oth 11111111111111111111111134356645.43..55.251................. HQ1456A :::::::::::::::::::::::::MSSNENA:T:::TE::RQ::::::::::::::::: NP0536A :::::::::::::::::::::::::::::A::::E::AE:RD:::::::::::::::::: VNG0159 :::::::::::::::::::::::::::::TDR:::::::::A:::::::::::::::::: Hut0689 ::::::::::::::::::::::::::::-:D:::E::QT:I::::::::::::::::::: rrnAC2550 MSWLIHAGEGRQYQVAPPVSWSQSYAEAR:TD:QR:::Q::::::::::::::::::::: Hmu0279 ::::::::::::::::::::::::MSEGTDT:::R::S:::::::::::::::::::::: hla2669 :::::::::::::::::::::::::::MEP:N:ER::ER::Q:::::::::::::::::: HVO_0551 ::::::::::::::::::::::::::::-:SD:KQ::EK::Q:::::::::::::::::: Hbo0979 ::::::::::::::::::::::::VTDDDR:T::::::Q:IN:::::::::::::::::: consensus VENSLDADASRVSVAVEAGGTEGIRVRDDGVGMDEEDLRAAVREHTTSKIRDIEDLESGV #oth 3..11..1.4113.3.12..4121213...2.13332234.131.1...132231.2511 HQ1456A I::::::::T:I:::::S::AD:::I::::I::::DAVQR:IK:::::::D::N::A::: NP0536A :::A::::::::D:T:::::KDR:V:A::::::S:T:A::::K::::::L::VS::D-TI VNG0159 :::::::G:AS:D:S:D::::DR:V:A:::R::TGD:::M:::Q:::::LD:ASG:D-:: Hut0689 L:::::::::::R:::::::::S:::S::::::T:G:A:::::::::::::::S:::::: rrnAC2550 :::AI:::::::D:V::::::D::::T:::I:::R:AVKT::E::::::::::A:::G:: Hmu0279 :::A:::::D:::::::Q::I:::K:T:::I::SR:AVER::E:::::::SS:::::R:: hla2669 I::::::G:T::A:S::::::::::I::::::IPADQ:E:::A::A::::GK::::DH:: HVO_0551 F::::::::T:I::::D:::V::V:I:::::::S::::EL::::::::::G::::::A:: Hbo0979 :::::::::N:I::::DS:::::V::::::::::R:::QM::E:::::::S::N:::::: consensus GTLGFRGEALHTIGAVSRLTIRTRPRG-GD-----------RGTELVVEGGDVTDVRPAG #oth ..........11111.12212111.12123111111111124.2114311.21332411. HQ1456A ::::::::::Y::S:::KM::::K::D::N::::::::::::::::HI:::T:V::EA:: NP0536A :::::::::::A::S:A::RL::K::D::T:::::::::::::::::::::::V:CG:V: VNG0159 ::::::::::Y:::S:AE::VT::::NA:::::::::::::T:ARIT:DH::AGS:A::: Hut0689 :::::::::::A:S::::M::T::::::::::::::::::::::R:R::::E::T:EA:: rrnAC2550 :::::::::::A:::::::::::::::::::::::::::::V:::::L::::::S:S::: Hmu0279 :::::::::::A::::::T::T::::::RE::::::::::HQ::::::::::::A:E::: hla2669 ::::::::::Y:V:::::::V:S::P::A::::::::::::A:S:IT::::::G:::::: HVO_0551 ::::::::::::::::::::::SK:::::::::::::::::V::::QY:::E:ESI:::: Hbo0979 :::::::::::::S::::::V:SK::::::TGRGSDAPGNDA::::R::::E:::::::: consensus CPEGTTVEVDDLFYNTPARRKYLKTTATEFDHVNTVVTGYALANPDVAVSLEHDGRETFA #oth 1.2..121142..311...1.1.1232...211131.25....1.3..13.3.21..1.1 HQ1456A :::::V::IR:::F:::::::F::::::::::I:::::H:::::::::IT:::ND::V:: NP0536A :::::::::TA::E:V:::::::::DT::::::QQ::A:::::A:::::R:D:::::::: VNG0159 H:A::::::T:::GE:::::::::RA::::G:::RA::R::::::::::::T:::::V:: Hut0689 ::::::::IA:::::V:::::::SRD:::::::::::RN::::::A:::A:::::::::: rrnAC2550 ::::::MA:E:::::V::::::::QES:::A::::::AS::::::::::::T:GD::::S Hmu0279 ::A:::I::::::::V::::::::Q:S:::A:::::::S::::::::::T:S:::::::: hla2669 ::::::::::G::::::::K:F::R::::::R::A::::::::::G:::::::::::::: HVO_0551 ::K::V:::::::::::::::F::::::::::::A:::H:::::::::::::::D::V:: Hbo0979 :::::V:::E:::::::::K:F::::::::::::::::Q::::::E::I:::::D::V:: consensus TTGRGDLRSTVLSVYGREVAESMISVDAG--------------DGPVASVTGLVSHPETT #oth .2.5122231112....1..3113523553411111111234323235315.11.1..21 HQ1456A :::::N:E:A:::::::::::::::ITT::::::::::::DIESDRITAIE::I::::K: NP0536A :P:D::RQ:A::E:::::::A::V::EQSWD:::::::::::::::::G:A::::::::N VNG0159 :::T::VQDAA:A:::::::Q:LRT:::DPA::::::::::::ADS:ER:H:Y::D::V: Hut0689 :::GDS::E::MA:::::::::::D:::R:::::::::::ELPA::LDAID::::::::N rrnAC2550 :::Q::::E::M::::::::::::::G::SEATGSGDEMDSFP:::LDG:H::::::::N Hmu0279 :::Q:::EA::::::::D::Q:::E::D::::::::::::DLP:::LE:::::::::::N hla2669 :E:N:::::A::A:::::::DA:VDMEWEPG::::::::NSDT:S::H:::::::::::: HVO_0551 :E:::::Q:::::::::::::::VP::H-:::::::::::::::A:GV::S::::::::: Hbo0979 :E:::S:E:::::::::::::::TR:EHEPD::::::::::::::::::::::::::::: consensus RSTRDYLSTFVNGRYVTARALREAVLDAYGGQLAPDRYPFAVLFVDVPPGTVDVNVHPRK #oth .14.2.22.21.1.1.22422.2.1221.14.1221.....11133332441.1...... HQ1456A ::::Q:::::I:::::E:::::::IIN:::D:::AN:::::L::L:ID::SI:::::::: NP0536A :AG:::MT:L::::::::S:V:::IVE:::R:::A:::::::IDI:L:::G::::::::: VNG0159 ::::E::A::::::A::DAV:::::::G::D:::::::::::::::CE--G::A:::::: Hut0689 :AD:E:VA::::::::RSS:A:N:IVE:::N::S:::::::::DLSL:A::::::::::: rrnAC2550 :AG:E::::Y::::::R:GTV:D::I::::T:I:::::::::::L:::A:D::::::::: Hmu0279 :AS::::::Y::::::R:D:V:::IV:::DT:::::::::::::CA:D:A:::::::::: hla2669 ::S:E::A:Y::::::::G:::D::::::::::::::::::::::E::::D::::::::: HVO_0551 ::::::::::::D::::D:V:::::::::::::DA::::::::::E:A:DA::::::::: Hbo0979 ::A:::::::::D::::::V::::::::::::::T::::::::::::::N:::::::::: consensus MEVRFDDEAGVREAVEAAVEDALLDAGLIRSSAPRGRSAPEQTEIAPESPPPD--GATDS #oth 1..11321521143.2511231..34..2.13....2.1132211624456543445655 HQ1456A ::::::N:T:::D::TN:IRE:::S::::::R::::Q:::AE:::TQS::DVTTKS:N:D NP0536A L::L:S::KT:::R::N:::S:::::::L::R::::Q::::::::PADEE::R::--:E: VNG0159 L::::E:::::KA::::G:R::::::::V:AG::::A:K:GDA::S::HS:T:::----- Hut0689 :::::A::::L::Q:R::::ET::EN:::::G::::Q::::::::D:TATT::S::VST: rrnAC2550 :::::A:DE::::Q:RT:::::::RE::L::T:::::::::::::T:::D---::::::: Hmu0279 :::::A:DE:::RQ::H::QS:::SE::V::::::::::A:::::::::GRV:::DE::A hla2669 L:::::E:PA::A:::E:::A::::H:::::T::::Q:::D::::N::G:ETEAI:GAGT HVO_0551 ::::W::::::KRE:TE:::::::SH::V:::::::::KADEAA:E:G:SGD:ATQLDPH Hbo0979 ::::::::S::KS:::S:::S:::EQ::::::::::::::DEV:P:::::TAEAR:GKGH consensus EGRRAEADGETSD-----------------DAAGSAR--AADSTESDRAA---------D #oth 566455554264533223212333444333524544611442434326433322222222 HQ1456A TNVDNNEIT:::VHTSAEKSEPDNNIKKTTQ:QSD:EDERT:I::::VGDKNQQGETSI: NP0536A GH::RP:V:----:::::::::::::::::SSST:G:::::::::QSN:::::::::::: VNG0159 -------------:::::::::::::::::RD::A:G::GG:AAGQS---:::::::::: Hut0689 :SS:E:SES:P:I:::::::::::::::::-:K:TND:::SRPSG::QS::::::::::E rrnAC2550 G:E::APN:RDAI::::::::::::::::::D:TTSG::QT:T:ATENS::::::::::E Hmu0279 T:A:E:::::Q::G:::::::::::::::::S::E::::RR:TPV::::::::::::::: hla2669 DHE::ALEDRE:GD:::::::RAGESRDGN:DSAAGS:::::AS:L:PTDDDA::::::W HVO_0551 :V:ES:P::::D:DADPP:::SARDVQSARE:RE:GA::R::::AT:D:DT::::::::: Hbo0979 SPQPSQS::RSRSGSSPTVSDSPRSATSGTES:R:TP::N:E:AH:::TGDAAAPRPTG: consensus ATRATP------DSDTADRGEPD-T---TGDDETADDAPAISSGD-TSPSPSSAPTTGGS #oth 555554111111664546645364333543656455545473245236432533455464 HQ1456A SS:D:TVEGADV::E::RHVD:RSDAAW:V:NNRRSEDAD:D:SI:NQQ:SQ:SE:I:A: NP0536A DV:SD:::::::PAASGGGT:::V:ASSD:TT:SDATG::NA:N:GPA:::T:S:DESPG VNG0159 GNGQR-::::::-----------:-:::-----------TAA::A:::E::A::FE:::G Hut0689 P:P:AS::::::K::ASQ:T:SE:-:::----HGFTK::NQAET:::E:ERRTGR:QH:T rrnAC2550 :PAQE:::::::--:::PTAR::G:QTE::NC:SS:T::S:Q:A:::K::SETGR:D:T: Hmu0279 GASGAS::::::AGERG:::Q::A::::::I:V:D:::T:D:AA:T:::RSR:SASS:RD hla2669 :VGDVS::::::SD::::P:G:PADRTGESAGP::P:GSNS:A:S:A:DR::--:RSWQ: HVO_0551 T:P::E::::::RNSG:GS:D:A:-:::A:::SG:SAETTE:::-:PTSV:::::P:PPR Hbo0979 ::TE:::::::::ESAENT::TSSEAAD:SQGV:S:E:WSV:A:R::RSR::R::E:PS: consensus EPDAAADP--ETGQSAAAADADAERRGAGDEAASAA------------------------ #oth 556534435134352644544443354346456545111123423242233222222211 HQ1456A T:N:T::TT:VQS::KSTE:V:NGHKD::E:CDAVV::::SGNNHNKNQSK::::::::: NP0536A HAA:D:A:P:TA:E:P:V:RD::DSESTA:A::::S:::::::::::::::::::::::: VNG0159 D-------:::AAD:::ST:GTR::P:S:T:SRTGR:::::::::::::::::::::::: Hut0689 :::S::P:A::::SP:S:GHGEGTSQ:S:EPERRG::::::::::::::::::::::::: rrnAC2550 GESGTG--::Q::G:VSGG:S:S::P::SATGQT:::::::::::::::::::::::::: Hmu0279 ::P-----::TSA::TRTD:::RG:ART:RD:----:::::::::::::::::::::::: hla2669 :::D:E:GT::E:DTG:V:GVE:DTE:DAG::GGLDRFGGSATDDNEDSGATDTSPDPTA HVO_0551 :Y:L:PG:E:T:E::SLST:DGS:S:STP:::S:VD::::SGADDNA::::::::::::: Hbo0979 KDKSDE:TDMQ:SRTGE:PE:K::T:T:NPTQ::LS::::GVSDEDHDSAEVTAGRSETA consensus ---------TDPERRFRAATTQRRLGGDEATLEPE-FDSLPSMRVLGQLHDTYVVAEADD #oth 222111114643445565446143133244543421512..31112..251..21..232 HQ1456A ::::::::KA::NDSVNEQSV:HD::::V:::::T:VE::::L:I:::IDE::II::S:: NP0536A :::::::::-:GTD:::::::::T:D:ETT:GT::T::R::::T:F::FD:::L:::::: VNG0159 ::::::::FDA:AENA:LP:GAGGPEA:DQDTTS::R::::DL:::::::::::::::G: Hut0689 :::::::::G:A:TAVVD:GS:T::ESG:EP::QT:::::::::::::FQE::::::T:T rrnAC2550 :::::::::ERG::K:TGGQE:A:::D:PEAT---:HE::::::I::::A:::::::T:: Hmu0279 :::::::::-::::K::GDDR:A::::E:PGQS--:L::::AL:I:::::E::::::::: hla2669 DASGGRREP:AQP:--ST::A::T:D:EPTSA:RT:Y::::PL:::::::E:::I:::P: HVO_0551 ::::::::PRS:PS:IA:P::::D:S:E::D:S:::::::::::II:::S:::I:::T:E Hbo0979 STA:::::E:TAP::LG:P:V::D::::::::S:::::T::::::::::L:::I:::TA: consensus GLVLIDQHAADERVNYERLQAAFAGDTTTQALAEPVELELTAREAALFEEYQDALARLGF #oth .1.11........11..1.2442224432...14.1433...1.1221133632.342.. HQ1456A :::::::::::::I:::Q:::TL:ETV:::::::::KI::::G:S:QV:::A:::E:V:: NP0536A :::::::::::::I:::::K::VD::L:::::::::SVS::::::::V:::GE::S:::: VNG0159 ::::V:::::::::H::::::RVD:--AS:::VA:A::::::G:::V::AALGG:RE::: Hut0689 :::::::::::::I:::::RD::::E:::::::Q:::ID:::::SS:::DF:A::::::: rrnAC2550 ::::V::::::::::::::K:K:E:E:::::::N::::G::::::EV:DRRS::::S::: Hmu0279 :::V:::::::::I:::::KD::E:E::::::::::::::::G:::V::DRVE::::::: hla2669 ::::::::::::::::::::T:::DGADA:::::::RI::::::::::::FV:D::GV:: HVO_0551 ::::V::::::::::::::RGEVE:::P::::::::D::::::::::::::RE:::QV:: Hbo0979 :M::::::::::::::::::REL:::V::::::D:::M::::::::::::::::::QT:: consensus HAERTGERTVEVRTVPAVFADALD---PELLRDVLSAFVA--GDDDGG-ETVEAAADELL #oth 32534131335.222.2232311211112121.2.322351144634415114222122. HQ1456A RVTDGDGDNIV:TA:::A::S:::::::A:V::::AETAESLNSH:RS:::IKTLT:DI: NP0536A RVRTDDD::LT:T:A::LLVE:AGDAM:::A::L:GE:TG::::P:--:G::A:VV:D:: VNG0159 D::LA:-::AR:TA::::L::::::::A::A:::::S:L:::DA:G--:TP:AD:::AV: Hut0689 S:::VDD:::A:T:::SLV:ETA:::::::::::::S::D::S:S:P::A::::::EAV: rrnAC2550 :TA:::::S:::::L:G:I:::AG::::DIV::::G:::::::::EAA:A:::::::::: Hmu0279 ::D:::D:::::::::G:I:::AG::::::VQ:::A:::::::EHEAA:D:::::::::: hla2669 R:::AD::E:V:ES:::::DA::::::::::::::::L:G::DATA:D::P:TDVV:::: HVO_0551 ::G:::::::S::::::::DA::::::::::::A:T:::R::EEV:::RK::D:V::::: Hbo0979 ::G::::::::::S::::::E::R:::::::::A:T:::S::EGE:::R:::D:V::::: consensus ADLACYPSITGNTSLTEGSVVDLLAALDDCENPYACPHGRPVVIEIDRDELEDRFERDYP #oth 2....2.121...1.2..1234..32.12............12223224.134....... HQ1456A ::::::::L::::A:::::T:N::EQ::T:::::::::::::L::F::T::DA::::::: NP0536A G::::H:::K:::::R::T:EG::S::::::::::::::::T:L:LP:E:I:T::::::: VNG0159 :::::S:A:K:::::A:::::A::D:::A::::::::::::TIV:V:G:::AA::::::: Hut0689 :::::::::::::::::::I::::ER:EA::::::::::::::V:::A:::AE::::::: rrnAC2550 G:::::::V:::::::::::RE:::::::::::::::::::T::H:::Q::::::::::: Hmu0279 :::::::::::::::::::IRE:::::::::::::::::::::V::::G::::::::::: hla2669 ::::::::V:::::::::::::::DR::::::::::::::::::RLN:E:IGS::::::: HVO_0551 S::::::::::::::R::::L:::::::::::::::::::::IV:F::::IAS::::::: Hbo0979 ::::::::V:::::::::::L:::S::::::::::::::::::::F::::I::::::::: consensus GHGGRRRE---- #oth ..42..422111 HQ1456A ::KD::L::::: NP0536A :::D::E-:::: VNG0159 ::A:::::DAGN Hut0689 ::TT::LD:::: rrnAC2550 :::::::-:::: Hmu0279 ::S:::T-:::: hla2669 ::A:::T::::: HVO_0551 ::::::::E::: Hbo0979 ::::::S:::::