|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1791 | HQ3733A | Hut2977 | Hmu2740 | VNG2398 | NP0956A | hla0558 | HVO_0019 | rrnAC2440 | Hbo1477 |
1316 | HQ3733A | 1790 | 1107 | 1121 | 1156 | 1247 | 1258 | 1225 | 1163 | 1185 |
1338 | Hut2977 | 1107 | 1786 | 1240 | 1106 | 1283 | 1224 | 1190 | 1179 | 1199 |
1350 | Hmu2740 | 1121 | 1240 | 1943 | 1156 | 1262 | 1244 | 1246 | 1188 | 1325 |
1383 | VNG2398 | 1156 | 1106 | 1156 | 1873 | 1225 | 1301 | 1350 | 1189 | 1267 |
1442 | NP0956A | 1247 | 1283 | 1262 | 1225 | 1802 | 1300 | 1305 | 1304 | 1395 |
1525 | hla0558 | 1258 | 1224 | 1244 | 1301 | 1300 | 1772 | 1398 | 1316 | 1387 |
1546 | HVO_0019 | 1225 | 1190 | 1246 | 1350 | 1305 | 1398 | 1796 | 1338 | 1418 |
1476 | rrnAC2440 | 1163 | 1179 | 1188 | 1189 | 1304 | 1316 | 1338 | 2019 | 1398 |
1564 | Hbo1477 | 1185 | 1199 | 1325 | 1267 | 1395 | 1387 | 1418 | 1398 | 1793 |
278 symbols consensus --------------------------------MSVRDEFDAWAADGRDRGMEDRHWHTAK #oth 11111111111111111222212122222222...231..2..35.1.2...3....... HQ3733A ::::::::::::::::::::::::::::::::::::Q:::Q::NT:::::::E::::::: Hut2977 :::::::::::::::::::::::::::::::::::G:A::Q::EQ:K:::::Q::::::: Hmu2740 :::::::::::::::::::::::::::::::::::S:A::E::RS:K:Q:::R::::::: VNG2398 :::::::::::::::::MPSGGVLPVGVHATP::::E:::E:::S:::K::::::::::: NP0956A ::::::::::::::::::::::::::::::::::::A:::::::::::::::Q::::::: hla0558 ::::::::::::::::::::::::::::::::::::E:::E:::A:K::::::::::::: HVO_0019 ::::::::::::::::::::::::::::::::::::::::::::::::K::::::::::: rrnAC2440 MSITRRVRLSVDTCCYEAEIAGILRPQLLKGR::::E:::::::E:K::::::::::::: Hbo1477 ::::::::::::::::::::::::::::::::::::::::::::::::K::::::::::: consensus HVLARMPVE-------------------DGDTVLDLGTGSGYALRALRETKGAGRAYGLD #oth 21.2...1.1111111111111111111311211...1.....3....224221242.1. HQ3733A YA:S:::I::::::::::::::::::::::E:I:::::::::::::::::QDI:MSV::: Hut2977 :A:G:::::::::::::::::::::::::::V:::::C:::::A::::AAG::::::::: Hmu2740 :::::::::SEARSDSEQSSEERSDPRDE::::::::C:::::G:::::::::::V::I: VNG2398 D::::::::::::::::::::::::::::D:::::::::::::V:::::-R:VA:G:::: NP0956A :A::::::::::::::::::::::::::ADE::::::C:::::A::::DA:D:::::::: hla0558 ::::::::::::::::::::::::::::A::A:::::::::::::::::-R:I::::::: HVO_0019 :A::::::::::::::::::::::::::E::::V::::::::::::::D:::I::GF::: rrnAC2440 ::::::::::::::::::::::::::::P:::::::::::::::::::D:ND::PC:::: Hbo1477 ::::::::::::::::::::::::::::PD:V:::::C:::::G:::::::E:::V:::: consensus GSPEMARNAREYTDDDAVGFLVGDFDALPFADDSIDHVFSMEAFYYAADPHHTLAEIRRV #oth 21.2.24..23..114622133...45...22122..31.1..1..13..442.4.21.1 HQ3733A :::K:VQ::::::T:SLLS:IK:::HQ:::::GT:::IW:::::::SQ::LQV::::::: Hut2977 R::Q:::::::::::A:::::::::QH:::GT::V::A:::::I:::P::VEA:R:L::: Hmu2740 AA::::H::SS::::PR:::AI:::EH:::D::::::C:::::::::Q:::AV:::L::: VNG2398 :A::::A:::T:::::DLAYV::::GS::::::A::::::F::::::S::RE:::::::: NP0956A :::::V:::::::::PQ:SYV::::GS::::A:::::A::::::::::::VGA:N:L::: hla0558 :A::::C:::S:::::::::::::::::::::::L:::::::::::::::::::E::::: HVO_0019 :::::VQ:::A:::T:DLS:::::::D:::D:::V:::W:::::::::::::::E::A:I rrnAC2440 :::::L::::::::::GI:::R:::::::::T:::::::::::::::S::P:::E::A:: Hbo1477 :::::::::QS::::EKI:Y::::::E:::::::::::::::::::::::::::S:VA:: consensus LRPGGTFYCAVNYYEENVHSHEWQENISVDMTRWSRAEYREAFREAGLHVAEQDTIPDRE #oth .11...1211.12321231113.2171313.21.2632...1..3..131.2.15.1.31 HQ3733A ::S::::F::::FFD:SQ:T:R::DR:::::QL:DQTQ:::K::K:::YI::::::::E: Hut2977 ::S::::::::D:VAD:P:TA::D:YVD:A:::::::::::::::::F:::::EA:::E: Hmu2740 ::::::::::::RW::H::::::E:LVG:P:LL::E:Q:::::::::FA::S::R:::T: VNG2398 :KS::::::G:::::::::::D::DS:::E::::D::T::::::G::::::A::L:A:T: NP0956A :::::::::::D:F::S::T:::::G:DI:::L:DYEQ:::::::::FY::::::::::: hla0558 :K:::::::::::FA:SEQT:A:::::AI:::L:::::::::::::::Y:::::A::::: HVO_0019 :K:::::::::::::::::::::::H::I::::::H::::::::D:::::::::S:A:LD rrnAC2440 ::::::ANI::::::::::::::::F:DIE:::::AD:::::::::::A::A:::::::: Hbo1477 :::::::F:::::::::::::::::::::E::::TGE:::::::::::F:::::N::::: consensus TEIPPADEFPTDDWETREAMVERYRTFGTLLTVGVAP- #oth 21..2134..214132.11.1111.14........322 HQ3733A :::::::G::IEN:::::::ID::::W::::::::::: Hut2977 V:::::A::::E::K:::::::HF:EH::::::::V:: Hmu2740 ::::AESD:::E:::::::::::::EY::::::::NTA VNG2398 ID::A:S:::HEGFDS:AD::::::::::::::::::: NP0956A :::::E:::::::::R::D::::F:E:::::::::::A hla0558 I:::D:SA::::S:HS:::::D::::W::::::::::: HVO_0019 ID::A:T::::::::::::::::::::::::::::::: rrnAC2440 V::::::T::::EF:::::::::::EL:::::::::TE Hbo1477 ::::DE::::::N::::::::::::::::::::::SH: