|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1790 | NP1178A | hla2743 | HQ1168A | VNG0294 | HVO_0773 | Hbo0757 | Hut0559 | rrnAC1812 | Hmu0657 |
1394 | NP1178A | 1824 | 1170 | 1172 | 964 | 1178 | 1194 | 1271 | 883 | 1255 |
1294 | hla2743 | 1170 | 2391 | 1106 | 870 | 1247 | 1178 | 1147 | 824 | 1237 |
1343 | HQ1168A | 1172 | 1106 | 2008 | 848 | 1236 | 1307 | 1205 | 891 | 1244 |
1055 | VNG0294 | 964 | 870 | 848 | 1354 | 926 | 941 | 889 | 988 | 941 |
1484 | HVO_0773 | 1178 | 1247 | 1236 | 926 | 1895 | 1460 | 1255 | 944 | 1342 |
1533 | Hbo0757 | 1194 | 1178 | 1307 | 941 | 1460 | 1820 | 1324 | 981 | 1335 |
1414 | Hut0559 | 1271 | 1147 | 1205 | 889 | 1255 | 1324 | 1796 | 997 | 1381 |
1105 | rrnAC1812 | 883 | 824 | 891 | 988 | 944 | 981 | 997 | 1356 | 1126 |
1496 | Hmu0657 | 1255 | 1237 | 1244 | 941 | 1342 | 1335 | 1381 | 1126 | 1806 |
317 symbols consensus -----------------------------------------------------VKGQEWY #oth 111111111111111111111111111111111111111111111111111112112211 NP1178A :::::::::::::::::::::::::::::::::::::::::::::::::::::M:::::: hla2743 VIGSTRRPPRRSNCRPIPRSNRCPVPGRHPRRLRANADRIQYGFVGRVCSTDN::::D:: HQ1168A :::::::::::::::::::::::::::::::::::::::::::::::::::::M::K::: VNG0294 :::::::::::::::::::::::::::::::::::::::::::::::::::::------- HVO_0773 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::K::: Hbo0757 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::K::: Hut0559 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC1812 :::::::::::::::::::::::::::::::::::::::::::::::::::::------- Hmu0657 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus QADDVAEEYDSKRFSRGGRLIDRREKEAVLDALGPVE-DKRVLEIACGTGRFTVMLAERG #oth 131221221232111311321131113111423312312442112111111113...22. NP1178A :E::I::A::D::::G:::Y:::::::::::::A::D:G::I::V::::::::::::::: hla2743 :::E:::::EDV:::G::E:::Q:::::::S::::I:EGH::::V::::::::T:::DQ: HQ1168A ::::::QA:E::::::::Q:::::::R::::S:N::T:GADI:::::::::::A:::::: VNG0294 -------------------------------------:----------------:::::: HVO_0773 :::E::Q::::::::K::::::::::::::A:::::::::NI:::::::::::::::QE: Hbo0757 ::::::Q:::::::::::::::H:::Q:::::V:::::::D::::::::::::::::::: Hut0559 :::EI::A:EE::::G::::::::::Q:::N:I::::::S:::::::::::::::::::: rrnAC1812 -------------------------------------:----------------:::::: Hmu0657 :T::::::::::::::::Q:::::::::::::I:::D:::S:::V::::::::A:::D:: consensus ADIVGLDISRAMLQQGREKARAAGVADTLEFLRGDAARLPFPDDHFDAVFAMRFFHLADT #oth .211.2...42.151..3..352.152221121...2......1...2.2.......123 NP1178A :::::M:::E:::E:::A:::::::EE::S::Q:::G::::::N::::::::::::::PD hla2743 :H:::I::::E::E:::Q::AE::LS::V::V::::S::::::::::T:V:::::::M:D HQ1168A :N:::I:::D:::A:::R:::NN::N::::L::::::::::::N::::::::::::::E: VNG0294 :::T:::::GP:::E::Q::AQ::::::I::M::::G::::::N:::S:::::::::::S HVO_0773 :NV:::::::::MV:::::::R:::::RI::::::::::::::::::::::::::::::A Hbo0757 ::::::::::::M::::::::R:::::HV::::::::::::::::::::::::::::::: Hut0559 ::V::::::S:::K:::::::S:::QSH:::M::::G::::::::::::I:::::::::: rrnAC1812 :N:T:::::GP:::::::::Q:T::D:RV::M:::::::::::::::T:::::::::::: Hmu0657 :::::::::GP::S::::::KS:::D:H:::M:::::::::::::::T:V:::::::::: consensus PAKFLAEMARVSKDQVFFDTFNRFSTRSIYNWLLPMGSRLYSRREVDRLLSGAGLELADA #oth .25113.12..12421.....134.2.33.1.1.....1..13322441132.2.41312 NP1178A :EG:IK::R::T:::I:::::K:Y:A::::::A:::::::::T::AKE:VV::D:::::: hla2743 ::P::::LC:::A:::::::::SR:L:TL:T:::::::::::E:Q:AAM::E:D:T:SGE HQ1168A :GT::T::::::N:I:::::::HR:::I::::::::::H::::SQ:KK:::D:E:AMV:D VNG0294 ::TY:R:::::::Q::::::::::::::L::::::::::::GS:::RA:V:::::T:::: HVO_0773 :::::::::::::G::::::::DG:L:VA:::::::::::::E:D:R:::GD:::D::G: Hbo0757 ::::::::::::::V:::::::DT:A:VV::::::::::::GEE:::G:::D:::K:T:: Hut0559 ::SY::::R::::EV:::::::::::::::::A::::::::::W::N:::GE:D:::V:: rrnAC1812 ::A:::::R::::E::::::::::::::::::A::::::::::W:I::::D::::::T:: Hmu0657 ::S:::::R::::H:::::::::::L::L:::A::::::::::W::::::D:::::::GE consensus THDFVLPYGFYRKIPNDLARPFRSLDTSVGDTPLGDRLASVSYWNARV------------ #oth 5..124.1.1..22.352.641.64.542.5235.2511.....4343443333233233 NP1178A A:::IV::::::AV:RW::::::MA::TI:R:TA::::::::::D::IPE:::::::::: hla2743 E:::::::::::EL:GPV:K:::A::EL::N:IP::YV::::::::::PAGKNGSGGSVD HQ1168A ::::L::::::::::::::HG::DV:K:L:ESEF::A:::::::T:T:DTDSATTDTAET VNG0294 D:::IA::::::EV:DWI:::::NA:VTL::::::EP:::::::DV:L:::::::::::: HVO_0773 K::::I:F:::::V::GI:QA:::::LA:::S::::D:::::::::::ESADESSRAATR Hbo0757 :::::::::L::::::GI:GEL:GF::::::::::E::::::::S:S:LTDD:::::::: Hut0559 :::::F:::L::A::DS::SA::TV:Q:::RV:G:G::S:::::HCQG:::::::::::: rrnAC1812 N::WL:::::::::::E::AS::::::AL:G::::EK::::::::TH::::::::::::: Hmu0657 A::::::::::::::::::SG:::I:EV::AS:V::KV::::::DT:::::::::::::: consensus ----------------- #oth 33333222111111111 NP1178A ::::::::::::::::: hla2743 SENNAGAE::::::::: HQ1168A NLETSQHTPDGTVAADD VNG0294 ::::::::::::::::: HVO_0773 ASDAE:::::::::::: Hbo0757 ::::::::::::::::: Hut0559 ::::::::::::::::: rrnAC1812 ::::::::::::::::: Hmu0657 :::::::::::::::::