| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 4886 | hla0782 | VNG2238 | Hut2902 | rrnAC2460 | Hmu3156 | NP1264A | HVO_0140 | Hbo1270 | HQ3402A |
| 3645 | hla0782 | 5138 | 3065 | 3153 | 3156 | 3295 | 3194 | 3315 | 3341 | 3242 |
| 3687 | VNG2238 | 3065 | 5002 | 3229 | 3235 | 3323 | 3346 | 3203 | 3312 | 3260 |
| 3914 | Hut2902 | 3153 | 3229 | 4866 | 3653 | 3693 | 3356 | 3344 | 3424 | 3380 |
| 4040 | rrnAC2460 | 3156 | 3235 | 3653 | 5314 | 3996 | 3528 | 3346 | 3490 | 3428 |
| 4085 | Hmu3156 | 3295 | 3323 | 3693 | 3996 | 4874 | 3491 | 3414 | 3491 | 3395 |
| 3848 | NP1264A | 3194 | 3346 | 3356 | 3528 | 3491 | 4883 | 3374 | 3503 | 3493 |
| 3868 | HVO_0140 | 3315 | 3203 | 3344 | 3346 | 3414 | 3374 | 5390 | 3797 | 3605 |
| 4034 | Hbo1270 | 3341 | 3312 | 3424 | 3490 | 3491 | 3503 | 3797 | 5086 | 3867 |
| 3923 | HQ3402A | 3242 | 3260 | 3380 | 3428 | 3395 | 3493 | 3605 | 3867 | 4906 |
759 symbols consensus --------------------------------------------------VNTRT-SALD #oth 11111111111122212221222223223322333332222244343433233..13.1. hla0782 :::::::::::::::::::::::::::::::::::::::::::::::::::T:::IR:R: VNG2238 :::::::::::::::::::::::::::::::::::::::::MRAHVVRSG:S:::::::: Hut2902 ::::::::::::::::::::::::::::::::::::::::::::::::::-VQ:::A::: rrnAC2460 MVIVGCRSAPVRDVWVGGLSDCSKSPSRPETRPTLLARNGFIVDRRLPWF::-:::A::: Hmu3156 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::G::: NP1264A ::::::::::::::::::::::::::::::::::::::::::::::::::M::::::::: HVO_0140 ::::::::::::VSSVATASSAETGKRDTRGESVSATGVEYIFGATLVAV::D::::::: Hbo1270 :::::::::::::::::::::::::MSDKSGRWAIQRGVGFISTRDQAAF::D::::::: HQ3402A ::::::::::::::::::::::::::::::::::::::::::::::::::M:D::::::: consensus ALVFGVDIQSGDVRGDAPSYALVAFD--------GED-------VDRDVVSRRKLRRLID #oth 321....11...1...2....1.31.11111111236122222112....14...4.112 hla0782 RP:::::VH:::::::D::::::IL:PVDDDDPDAP:TDEPMAR:T:::::F:::C:::: VNG2238 :::::::V:::::::::::::::S::::::::::::T::::::::E::::T::::L::VA Hut2902 DVI::::V:::::::::::::::I::::::::::::S:::::::I::::::::::::::: rrnAC2460 :V:::::::::::::::::::::V::::::::::::S::::::::E:::::::::::R:E Hmu3156 :V:::::::::::::::::::::V::::::::::::E:::::::IE:::::L:::::::: NP1264A D:I::::::::::::::::::::::::::::::::DA::::::::::::::::::H:R:: HVO_0140 SV::::::::::I:::S::::::VL:::::::::TR:TESDEVRIE:::::F:::::::E Hbo1270 S::::::::::::::::::::V::::::::::::::N:::::::I::::::H::::::VE HQ3402A S::::::::::::::::::::V::::::::::::::H::::::::::::::Y:::S:::: consensus DEEPAIVATDNMYELAADKDALVHFLRSLPDETKLVQVTGAERPEPLSRVASRHGVPYGK #oth 132.322....2....21.23.122.14..42.3......1.1........2...12.1. hla0782 :RK:LY:::::A:::::N:ND::G:::::::G:R:::::::::::::::::::::I:::: VNG2238 :R::::::::::::::::::Q:::L::R:::S:T::::::D::::::::::K:::::::: Hut2902 :R:::::::::::::::::::::::::E:::G:R::::::D:Q:::::::::::::A::: rrnAC2460 ::::::::::::::::E:::::I:V:G:::::::::::::D::::::::::K:::::::: Hmu3156 :V::S:::::::::::::::::::::G:::::::::::::::Q::::::::::::::::: NP1264A ::::::I::::T::::E::G:::R:::Q::S:::::::::D::::::::::A::::::A: HVO_0140 RD::RV::::::::::T:::D::R:::W::HG:Q:::::::::::::::::::::::::: Hbo1270 R:Q:::L:::::::::::::E:::::::::T::::::::::::::::::::::::::::: HQ3402A R:::::I:::::::::::::E:::::::::A::T::::::::::::::::::::::T::: consensus DPMKEAEAAARLAAANVGYEVSAFTDTTEVKVSRGRST-GKGGWSQDRYTRRIHGSVKRR #oth 31.1....1....14...21.2..321.22..1.....1.1....2..1......2.134 hla0782 E:::::::S:::::::::H::T::::E:Q::::::::::::::::::::::::::N:RK: VNG2238 PA:E::::::::::H:::::::::::E::L::A:::::G:G::::A::F::::::::::E Hut2902 ::::::::::::::G::::A::::SE::::::::::::G:G::::E::F:::::::::KL rrnAC2460 :::E::::::::::::::Q::::::::::::::::::::::::::E:::::::::A:RK: Hmu3156 E:::::::::::::::::Q:::::::::::::A:::::G:G::::E::::::::::::Q: NP1264A P:::::::::::::R::::::::::::::I::A:::::G:G::::E::F::::::A::TT HVO_0140 :::::::::::::L:::::::A::EN::T:::::::::::::::::::::::::::::QQ Hbo1270 K:::::::::::::V::::::::::N::T::::::::::::::::::::::::::::::: HQ3402A K:::::::::::::::::Q:::::G:::T::::::::::::::::::::::::::::::: consensus AREVESELDDAGLDYERDVTEKYGGYSNAVFTVEARPEDIPVSRGRSGDTRVEIERERRD #oth 2.31234.33.1.111213......112.3.3.212.321...45.1..1.1.1.12.21 hla0782 T:Q:Q:K:KE:N::F:::::::::::A::T:A:::::::::::NS:A::V:::V:::::: VNG2238 T:T:::T::::::::D:E::::::::A::::::Q::::N::::EH:A::::::V:PV::: Hut2902 :::::R::E::N:E:D:::::::::F:::::E:::P::::::::E::::::I::::::LE rrnAC2460 :::I:::::A:::E:::::::::::F:::::Q:S:::Q::::::A:::::::::::Q::: Hmu3156 ::S::::::::::::::E:::::::F:Q:L:::S:::Q::::::M::::V:::::::::: NP1264A T:::::K::A::::::VER::::::::R:::E:S:T:SEL:::SM::::V:I:::::::: HVO_0140 S:::::S:KE:N:::::::::::::::Q:L::::G::::::::SH::::::::::::::: Hbo1270 S::IADR:KQ:::E:DV:A::::::::::I::::G::D:::::S:::::::::::::::: HQ3402A S:::QNR:QQ:N:EF:SEI:::::::A::::::S:P::E::::A:::::::I::::::Q: consensus GIEFEPLAKRRDHVIVGIDPGTTTAVAVVGLDGTVLDVYSSRTADTAAVIEWIIERGRPI #oth ...13..14...2.2..1.......1.212...522213.1..3.11311..11.2...3 hla0782 :::Y:::V::::R::::::::::::A:::::::::HAL:::::S:::D:T:::::Q:::: VNG2238 ::::R:::R:::R:L::::::::::::L:::::H::::M:T:::::GD:::::::H:::A Hut2902 ::::::::H:::::V::V:::::::::::::::E::E:H:T::::::::::::::::::: rrnAC2460 ::::K:::::::::V::V:::::::::I:S:::::::::::::D::::TT:::::::::V Hmu3156 ::::R:::::::::V::V:::::::::I:::::E:::::::::V:A:G:T:::V:::::: NP1264A :::YR:::Q::::::::::::::::::LLD:::G::::W::::::::E:::::::::::V HVO_0140 :::::::V::::R::::::::::::::::::::R::::H:T:::::::::::L::::::S Hbo1270 :::::::V:::::::::::::::::A:::D:::NK:::H:T::::::D::::L::::::V HQ3402A ::::D:::E:::P:V::::::::::A::::::::IF::::::::::::::::L::::::: consensus VVAADVTPMPETVEKFRRSFDAAGWTPDTDLPVDEKLHRTREEAYDNDHERDALAAALFA #oth 2.....2...1....211..1.12.5.31.111.1.2....234111..1...1....3. hla0782 I:::::E::::::::::::::::::R:T::::::::::::::TN::::::::::::::Y: VNG2238 L:::::::::D::::IAA::::PT:D::::::::::Q::::::G::D::Q:::M::::Y: Hut2902 :::::::::::::::L:::::::A::::S:::::::::::::A:T:::::::::::::E: rrnAC2460 :::::::::::::::L::::S::::E::::::::::K::::::::::::::::M::::Y: Hmu3156 :::::::::::::::L::::S:::::::S::AI:V:Q::::::G:::::::::M::::G: NP1264A I:::::E::::::::I:::::::::R:E:::::::::::::N:::::::::::M:::::: HVO_0140 L:::::Q::::::::::::::::::A:AS:I:::::::::::VD:E:::::::::::::: Hbo1270 I:::::E::::::::::::::::A:I:E:::::::::::::DVG:E:::::::::::::: HQ3402A :::::::::::::::::::::::A:::A:::::::::::::DAV::D::Q:::::::::: consensus YDDHADQFERIAAKVPPREDRGEVIARVVAGEESVEAVLRDLSDDD----SDD-----AD #oth 3.3121111.24411.2551213.311.12231111211332422232124331111132 hla0782 ::::E:::::::::T:::L::EA:::G::::GS:::::IEG::E::GSGGG:GGGDGG:E VNG2238 ::HYRETI::ATRET::TL:E:D:A:::LD:-:PLQ:::S::EET:::::DPE:::::P: Hut2902 ::::::::::V::::::::EV:P:L:::::::::::S::D::A:EE::::GEP::::::E rrnAC2460 F:H:::::::V:G::::QY:V:P::D::::::::::T:::::E::::::::E::::::E: Hmu3156 ::::::::::::E:::::::V:::T:::::::::::S::D:::::G::::D:G:::::DE NP1264A L:::::::::VQ::T:AGF:::::::::::DG::::TA:EA::E:E::::::E:::::ET HVO_0140 F:::E::::::SR:::ADV::E::::::LVS:::::::::EMA::GDGGDP::::::::: Hbo1270 F:A:E:::Q::SQ::::NIE::::::::::::::::::::EITG::E:::::E:::::D: HQ3402A A:N:::::::VIQ:T:RDV::::::::::::K::::::::::DE::::::TT::::::D: consensus ETAHEPRELTDEEKEIKRLRARVERLESHVEDLEATIEEKDDTIEEYEDELSEARREERR #oth 2341221.1.41.24.12.34112..13.231.3322541.321322352.14.11.2.3 hla0782 ::DPTEP:R:E::ET:R:::E::G:::::A:S:::DLT:R:ER:A:L:G::E:::::::I VNG2238 :PT:D::::::D:RR::D:E:Q::::QA::S::D:ELDA::A:::::::::::::::::Q Hut2902 TSE:T:::::A:::Q::::QD::::::::::::NE:::T::G::SDLR:K:ES::S:Q:A rrnAC2460 T::::::::::D:::::::N::I:::::::D::KE::KR:::QLS:KDKQ:EK::S:G:: Hmu3156 Q:E:T:::::E::::::::::::::::G::D::::::QQ:::RLA:K:R:::Q::S:::: NP1264A TEK::::::::::::::::NE::::::T::S::KD:V:Q:::R:V:L::::::::::::: HVO_0140 :E:::EP:::P::R::RE::S:::::::::G::KS::::::E:::::KE:::D::::::: Hbo1270 :ST::E::::::::K:R::ER::::::::T:S:::::A:::E:::::KT:::::K::::: HQ3402A ::D::T::::Q::R::::::R::D:::::::S::D::D:R:A:::S::E:::::K::::: consensus EARERREVTRLERENDRLERELEEERERKEELEDKLERLKALWKLDHSNFADVAENQ--- #oth 12.21.1.31.112131.2122244213422.43.222..6..1.....121.5442111 hla0782 :::S::A:S:::::T:::Q::RD:A:::AD:::G:V:T::E::R::::::G:::AD:::: VNG2238 :::::::::Q::W::::::T::::Q:::AD:::A::::::D::::::::LG::GGEG::: Hut2902 :T:K::::::::::::::::::DA::::V:D::G:::::::::::::::::E:E:TK::: rrnAC2460 :V:KD::::::Q:R:EA:::KVDD:Q:KR:A:A::::::::::::::::::::S:K:::: Hmu3156 :V:KD::::::Q:::E:::::::A:::DR:A::A::::::G::::::::::::S:K:::: NP1264A :::::::::::::::E::K:::S:VESK:AA:D:::::::E:::::::::::::DEK::: HVO_0140 :::::::::::::::G::::KV:SLESD:A::A:::DQ::S::::::::::::NT:GIFT Hbo1270 ::::::::Q::::D:N::::K::SL::EN:::TG:I::::R::::::::::::NT:K::: HQ3402A Q:::::::K::::::N::::RV:TVESE:DD:NQ::R:::H:::::::::S::DTDG::: consensus ------------------EGLVPVKVVEQFTKDAIEAADEAYGLAAGDVVYLRDASGAGR #oth 11111111111111111132.22..2111..52.23511232.1121.1121...1...2 hla0782 ::::::::::::::::::-::AS::::::::L::L:::::::::V::::::::::::::: VNG2238 ::::::::::::::::::RD::A::P:D:::V::::T::DE::I:S:::::::::::::: Hut2902 ::::::::::::::::::::::::::::K::TA:::D::DRF:::E::IILF:::T:::: rrnAC2460 :::::::::::::::::::::T:::::::::::::AD:::RF::VED:I:MF:::::::: Hmu3156 ::::::::::::::::::::::S:::I::::SG:::S::::V::VED::IL::::::::: NP1264A ::::::::::::::::::RD:::::P::::::G::::::K:::::::::::::::::::: HVO_0140 SDSEWEVAGRESEANESGGN:::::I:::::NG:LDHTV:E::I:::::::::::::::: Hbo1270 ::::::::::::::::::-N::::::::::::::::R:::E::::S:::::::::::::H HQ3402A ::::::::::::::::::-D:::::II::::T::VIRT::Q::::S:::::::::::::Q consensus STAERLADTDPRIVLRSGG-LSDVADEVLFDHEIPVAPADGVTIQEVDELAVARESEVEA #oth 3..12.1452.13.1.4.11..131.21..1331..2.126.221.1....1.3142123 hla0782 R::::::E:E::A:I:D:N:::E:::Q:::::NV::L:::A:PVR::::::::S:EA:A: VNG2238 R:::L::GF:::V::::::::::A::::::::::::G:::::::R::::::I:N:::::S Hut2902 ::::::::L:::L:::T:::::::S:::::EEDV::::::S::V:::::::::::R:::E rrnAC2460 :::QQ::NI::K::::N:N::::I::Q::::ND::::::EM::V:::::::::::G:I:: Hmu3156 :::Q::::VN::::::N::::::::::I::::G::::::EM::V::::::::::DH:::: NP1264A E:::L:V:HE:KV:::E:::::EQ:::I:::N::::G:::E:::::::::::::::DI:: HVO_0140 T::::::EF::KV:::::N:::EA::::::EADV:::::G::::::I::::::K:::::S Hbo1270 :::::::E:N::A:I:T::::::A:::I::E:::::G::EN::M::I:::::::::D:S: HQ3402A ::::::VA:::::::::::N::E:::R:::EN:V::::V:D:A:::::::::::::DI:T consensus AIEDWERRAAERRKEQKAEMVDQIISEHRADRRSG---- #oth 2121.141122.312343421.31......445652421 hla0782 :VD::::::ER:::DE:Q:HL:R:::::::G:TLPETEE VNG2238 VV:::KQ:K:::ER:::ET:::S:::::::::G--:::: Hut2902 :::E:KEY:S::E:ART:::::TL::::::SG:G:S::: rrnAC2460 ::::::E:::D:::::N:::::::::::::::PTSEN:: Hmu3156 ::::::E::E::KR::N:::::::::::::::PES:::: NP1264A V:D:::S::::::R:K:EAQL::L::::::REH:-:::: HVO_0140 ::S:::D::E::Q:::RE::::::::::::EN:R::::: Hbo1270 L::::::::E::::::QSQ:::R:::::::ET::ESR:: HQ3402A :::::::::::::R:R::S:::::::::::ETQTQSGQ: