|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1785 | VNG1235 | hla1457 | NP3358A | Hbo0230 | HQ3352A | HVO_1312 | Hut0962 | Hmu1507 | rrnAC0512 |
1074 | VNG1235 | 1802 | 839 | 800 | 846 | 758 | 848 | 906 | 843 | 842 |
1258 | hla1457 | 839 | 2105 | 1037 | 1014 | 945 | 1005 | 955 | 953 | 916 |
1130 | NP3358A | 800 | 1037 | 1791 | 976 | 841 | 990 | 901 | 908 | 905 |
1228 | Hbo0230 | 846 | 1014 | 976 | 1980 | 1096 | 1086 | 960 | 970 | 1015 |
1155 | HQ3352A | 758 | 945 | 841 | 1096 | 1916 | 943 | 918 | 948 | 897 |
1279 | HVO_1312 | 848 | 1005 | 990 | 1086 | 943 | 2045 | 1006 | 1035 | 1043 |
1236 | Hut0962 | 906 | 955 | 901 | 960 | 918 | 1006 | 1882 | 1141 | 1057 |
1277 | Hmu1507 | 843 | 953 | 908 | 970 | 948 | 1035 | 1141 | 1802 | 1105 |
1177 | rrnAC0512 | 842 | 916 | 905 | 1015 | 897 | 1043 | 1057 | 1105 | 1806 |
316 symbols consensus ----------------------MEVLVVGAGEMGRWFARTV------ADADVAFADRDPA #oth 1111111111111111111111.42.11...12.1.2133252222153343.12.4.45 VNG1235 :::::::::::::::::::::::::::::::AV:::V:EV:::::::-A:PA::::T::Q hla1457 MRWCGRPSRALLRRPSLPYGRQ:DI:::::::I:::I:D::LADESPI::T:::T::::: NP3358A :::::::::::::::::::::::QL:::::::::Q::::HS::::::GADA:::::::SD Hbo0230 :::::::::::::::::::::::::::I::::::::VGS:LT::::::EF:::::::::D HQ3352A ::::::::::::::::::::::::::::::::::::I:::LL:::::QSF:I::V:::D: HVO_1312 :::::::::::::::::::::::D::I::::A:::::G:::::::::-:::L::::A::E Hut0962 :::::::::::::::::::::::N::::::::::::V:::LVADTT:HSP:I:VT:L:ST Hmu1507 :::::::::::::::::::::::R:::::::A::::::DS:AT::::::DEI::V:A:ET rrnAC0512 :::::::::::::::::::::::N:::::::A::Q::::::RTH::::::A:::T:V:QS consensus AAVAAADA-----------RDGRAVALDTDERFDVVCLAVPMPAAAAAIEAYADRAERAI #oth 5.52..43311111111115322123435422133.12...23224511443.64.24.2 VNG1235 R:::::::T::::::::::ENA::::V::AAS:A::AV::::R::G:::D:H:AA::::: hla1457 V:DD::AG:::::::::::::AE:IPV:S:TTH:A:::::::S:VP::V::::S:::::: NP3358A T:RR::AGL::::::::::N:AQ::P:::::::::::I::::S:V:D:VA:H:GK:TA:V Hbo0230 ::R:::TS:::::::::::T:::T:S:A:E:T::A::::::IS:VDE:VFDH:P:::::V HQ3352A I:::::ETIQRDADHASHN:TVQ::TG:INAT:SI::::::IT:VEP::IN::::::Q:: HVO_1312 S::::::::::::::::::LG::::P::G:::::::::::::RL::D:VADN:H::DA:M Hut0962 ::QR:::::::::::::::VG:::::SE:T:::EL::I:::::VT:E:::S::TN::E:: Hmu1507 ::A::::::::::::::::L::::LTPPVE::::L::V:::L::::SV::E:::::D::: rrnAC0512 ::E:::N::::::::::::VG:::::S:AA:T:::::I:::::V:ET::DEF:PC:TD:: consensus CDVTGVMADPVAAMRAHAPDR-ERASLHPLFAPANAPGNVAVVADAGGPVTDRIRDALAA #oth 3.32.4.6522411241423411.3.2....11521..221315235..42432434252 VNG1235 V:F::::GE:L:::A:AG:PGV::::F:::::::H:::RI::TDGD:::TV::L:GW::D hla1457 L::S:E:T:AI::::E::::::::::Y::::::PRV:::::A:V:E::::VEE:TA:IE: NP3358A V::A:E:R:S:::L:K::::::::::F::::SAS:::::LP::V::E::TVAAL:A::S: Hbo0230 F::::::DA::T:::EA:A:::::L:::::::A:::::T::A:R::P::::E:VC:T:S: HQ3352A F:I::::QT::EM:Q::CEHL:::H:::::::AT:::::::F:P:SP::I:N::V:TVIE HVO_1312 :::::A:KP::V:::N:L::::::L::::::::H:::::::A:::ES::K::TLLAD:D: Hut0962 ::LA:I::E::E::AE::::C:::V:F:::::::::::::PL::AES::::::V:N::T: Hmu1507 :::::S:R::ID:::::::EI:::V::::::::E:::::L:::T::D::IAET:::R:T: rrnAC0512 V::::S::G:I::::DAM::G:Q:L::::::::E::::::::::::L::DATAVV::I:: consensus AGNEVFETTPAEHDEAMETVQARAHAAVLAFALAADDVRDEFATPISAALDDLVETVTGG #oth 2..321211231..4..1.1.141.1.1..222.121.22412.12124.3422241221 VNG1235 ::::LV:VPA:V::D::::I:G:T:::I::::::::::P:AL:::VYEE:SR:ADR:::: hla1457 G:::::::::::::::::::::G:::::::WR::G::::E::H::V:::::EVAD:::E: NP3358A ::::::::::E:::R:::::::Q::T::::Y:::::::DSR:H:AL:EP:EA::DD:V:N Hbo0230 ::::::::::::::::::::::S:::::::Y::::E:::E:::::V:ES:SS:::::::: HQ3352A :::H::R:::N:::M::Q::::S:::::::Y::::A:::::::::V:R::::I:A:::D: HVO_1312 :::R::::::E:::A:::::::A::::::::GV::::::E:::::::::::E::AS:S:: Hut0962 ::::L:::::::::A::::::::T:::I:::G:::EP:P:R:Q:::::G:F::L::::D: Hmu1507 R:::LVA::::::::::::::::::T:::::::::E::P:T:Q::::E::F::::QL:D: rrnAC0512 :::NC::::VS:::::::::::S:::::::::M::A::P:Q:Q:::::G:F::::Q:::: consensus TPRVYADIQSAF-DGADDVAAAARRLADA---DAETFAELYERAS--------------- #oth 322..21..43.14.213..3..431.41111.333.441.3523555432323322212 VNG1235 ::G:::::::T::G:SQE:::::D:I:A:AAG:GDA:::V::D::::::::::::::::: hla1457 S:E:::E::R::::::::::::::EI::S::::S:A::A:::::RGDREGRERHE::::: NP3358A ::E:::E:::R::::S:A::E::Q::::::::::SE::D:::E:GR:::::::::::::: Hbo0230 :::::RE::ES::P:::R::D::TE::S::::::K::EQ::RD::TRPDARDANPEPDAA HQ3352A :::::QE::TT::R:::E::S:::QI:::::::S:::NQ::TE:GEHT:::::::::::: HVO_1312 ::::::::::S:GG:::R::D:::A::A:::::D:A:DD::R:V:RGDSGVAAGADRVAD Hut0962 E::::::::A:::E:V:::::::D:::N:::::DDG:E:::QA:RPAQGTR::::::::: Hmu1507 EA:::::::A:::E::::::::::QI:R:::::D:::T::::SLQ::::::::::::::: rrnAC0512 DS:::::::RT::::::A::D::SE:::::::::D::ER:::QL:::::::::::::::: consensus ---------------- #oth 2222222221211111 VNG1235 :::::::::::::::: hla1457 :::::::::::::::: NP3358A :::::::::::::::: Hbo0230 TELDSESEDDR::::: HQ3352A :::::::::::::::: HVO_1312 DRSRDRDQTDKHDPVE Hut0962 :::::::::::::::: Hmu1507 :::::::::::::::: rrnAC0512 ::::::::::::::::