|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 5316 | VNG0864 | Hut1323 | HQ1693A | rrnAC1390 | Hmu1900 | hla0067 | NP2982A | HVO_1048 | Hbo0542 |
3945 | VNG0864 | 5255 | 3265 | 3539 | 3462 | 3448 | 3568 | 3532 | 3562 | 3616 |
4148 | Hut1323 | 3265 | 5352 | 3497 | 3861 | 3876 | 3549 | 3706 | 3728 | 3828 |
4113 | HQ1693A | 3539 | 3497 | 5417 | 3721 | 3663 | 3696 | 3810 | 3656 | 3913 |
4432 | rrnAC1390 | 3462 | 3861 | 3721 | 5458 | 4360 | 3931 | 4078 | 3863 | 4051 |
4382 | Hmu1900 | 3448 | 3876 | 3663 | 4360 | 5521 | 3910 | 4097 | 3832 | 4033 |
4287 | hla0067 | 3568 | 3549 | 3696 | 3931 | 3910 | 5698 | 4030 | 3756 | 3958 |
4470 | NP2982A | 3532 | 3706 | 3810 | 4078 | 4097 | 4030 | 5407 | 3815 | 4092 |
4349 | HVO_1048 | 3562 | 3728 | 3656 | 3863 | 3832 | 3756 | 3815 | 5268 | 4155 |
4525 | Hbo0542 | 3616 | 3828 | 3913 | 4051 | 4033 | 3958 | 4092 | 4155 | 5358 |
787 symbols consensus MSLSDADRELVVAELGREPTPAEAALFENLWSEHCAYRSSRPLLSAF--------DSEGD #oth .2.132.222112211.11.5..32..........1....11..22.1111111121221 VNG0864 :::G:S:::R:::A:::D:::::::::::::::::::::::S:::::::::::::::DSE Hut1323 :A::TS::AV::EKID:D::T::::::::::::::S::::::::GR:::::::::E:D:E HQ1693A :T:::S:L::ITT:::::L:::::::::::::::::::::::::QS:TTGDDSAN:EGAE rrnAC1390 :::::::H::::E:I:::::R::::::::::::::::::::::::::::::::::::::: Hmu1900 :::::::HD:::E:::::::Q:::::::::::::::::::::::G::::::::::::::: hla0067 ::::EP:H::::::::::::A::V:::::::::::::::::::::::::::::::E:::: NP2982A ::::PS:::::TE::::::::::E::::::::::::::::Q::::::::::::::E:::: HVO_1048 :T::::::D::::::::D:::::EI::::::::::::::::::::::::::::::::::: Hbo0542 :::::::::::::::::D::S::TV::::::::::::::::::::::::::::::S:::: consensus QVVVGPGDDAAVVALPD---------------DTDTYITMGIESHNHPSYVDPYDGAATG #oth 3..11.....1.1311443423222222221254431213.1.......1...2...... VNG0864 A::::::::::::RV:-:::::::::::::::G::QLV:V:V:::::::::::::::::: Hut1323 H:::P:::::G:::::E::::::::::::::::EN::LA::::::::::::::::::::: HQ1693A H::I:::::::::R::RVDEAS::::::::::E:PI:::::::::::::::::::::::: rrnAC1390 :::I:::::::::S::SHGD::::::::::::GEEM:::::V:::::::::::F:::::: Hmu1900 :::::::::::::E::::::::::::::::::SDG::::::::::::::::::F:::::: hla0067 ::::::::::::L:::EPDAADTPAAERDADDYG:Q:V:F:V:::::::F:::V:::::: NP2982A R::::::::::::::::PETGE::::::::::NS:::::::::::::::::::F:::::: HVO_1048 :::I:::::::::::--::::::::::::::::D:::::L:::::::::::::::::::: Hbo0542 :::::::::::::R::SYDAAEASDETDSDDAE:E::::::::::::::::::::::::: consensus VGGIVRDTLSMGAYPIALADSLYFGDFDREHSRYLLEGVVEGISDYGNAIGVPTVAGSVA #oth .......11....1....2.2....3..1.122..11......11...2......2.123 VNG0864 ::::::::::::::::::::A:::::::D::A::::D::::::::::::::::::::ATQ Hut1323 :::::::I:::::F::::T::::::N::::::::::::::::::::::S::::::::::: HQ1693A :::::::::::::::::::::::::S::::RTQ:::D::::::A:::::::::::::::E rrnAC1390 ::::::::::::::::::::C::::::::::::::F::::::::H:::C::::::T:::: Hmu1900 ::::::::::::::::::::::::::::::::::::::::::::H:::C::::::T::A: hla0067 ::::::::M:::::::::L::::::G::::R::::F::::::::H:::C::::::G:::: NP2982A ::::::::M:::::::::::::::::::::::K::F::::::::H:::C::::::T:::: HVO_1048 ::::::::::::::::::::C:::::::::::::::D::::::A:::::::::::T::TS Hbo0542 :::::::::::::::::::::::::::::::::::::::::::A:::::::::::::::E consensus FHDDYEGNPLVNVACVGLLDADRLVTAEAQSPGNKLVLVGNATGRDGLGGASFASEDLAE #oth ..23.11......1.1.12431.21..3.151..2.1.1.22...............12. VNG0864 :::G:T::::::::::::VTE::::::A:K:::::::::::::::::::::::::::::: Hut1323 ::E:::E::::::::::M:S::::I:::::AA::N:::::AS:::::::::::::::I:: HQ1693A ::NK:T:::::::::I:::TDE::::::::::::::::::::::::::::::::::::S: rrnAC1390 :::::::::::::S:I:::EPE:TI:::::E::::::::::::::::::::::::::::: Hmu1900 ::E::::::::::S:I::V:EE:MI::V::Q::::::::::S:::::::::::::::::: hla0067 :::G::::::::::::::TNE::::::T::E:::T:M::::G:::::::::::::::::: NP2982A ::::::::::::::::::T:DE::::::::T:::::::F:::::::::::::::::::D: HVO_1048 ::EN:::::::::::::::S::::::::::KA::::::::SS:::::::::::::::::: Hbo0542 ::EN:::::::::::::::::::::::::::A:::::::::::::::::::::::::::: consensus DAETEDRPAVQVGDPYTEKLLIEANEALIDEDLVESARDLGAAGLGGASSELVAKGGLGA #oth ....1..1.....1..3..1.1.2..3.2234.141...............11.1.11.. VNG0864 ::::A:::::::::::::::::::::T:L:R:::VA:::::::::::::::M::Q:E::: Hut1323 :::::::S:::::N::R::::::T:::::E:::::::::::::::::::::::::::F:: HQ1693A :::::::::::::::::::R::::::E::TAE:IQ::::::::::::::::::::::::: rrnAC1390 ::::::::::::::::S::::V:C::::L::E::::::::::::::::::::I::::::: Hmu1900 ::::::::::::::::::::::::::Q::::G:I:::::::::::::::::::::::::: hla0067 ::::::::::::::::A::R:::C::::V:::::L::::::::::::::::::::::::: NP2982A ::::::::::::::::A::R::::::E:V:DS::RA:::::::::::::::::::::::: HVO_1048 :::::::::::::::::::::::C:::::::::::::::::::::::::::::::::F:: Hbo0542 ::::::::::::::::S:::::::::E:VEAN:::A:::::::::::::::::::::F:: consensus RIELDRVHQREPNMNAMEILLAESQERMCYEVAPEDVDRVAELAARYDLGCSVIGEVTD- #oth 314.25.11...2.1.3.1..1.....11...3221.23.422.311..131...12222 VNG0864 ::T::A::::::E:::::::::::::::::::::A:::A:R:V:T:::::::::::::T: Hut1323 A:D::D:P::::::::T::::S:::::IV:::TD:N:E::Q::::::::EAA::::::E: HQ1693A ::N:E:::::::A:::::::::::::::::::H:D::ET:GDI::K::::YA::::IR:: rrnAC1390 ::::::::E:::::::::Y:::::::::V:::::::::::::::E:F:::::::::L:EP Hmu1900 E:::TE::E:::::::::Y::::::::::::::::N::::R:I:D:F:::A::::::::T hla0067 :LD::S:::::::::::::::::::::::::::::::A::EA::E:F::::::::::::: NP2982A H:::::::::::::::L:::::::::::::::R:::::A::AV:DK:::::::::D:::: HVO_1048 E:G:EK::::::::::F::::S::::::::::T::N:E::Q:::::F:::SA:::::AE: Hbo0542 E:::::::::::::S:L:::::::::::::::RE:N:EQ::DI:EK:::::::::::AE: consensus G-NYVCTFDG---------------ETVVDVPAEFLADGAPMNDLDSVEPEQPDRD-LPD #oth 121.1.1131111111111111111.21..21132111...32.14444.33232112.3 VNG0864 ::::::E:::::::::::::::::::::::A::TV::::::AT:QP:TV:QA:AT::R:: Hut1323 DP::T::L::::::::::::::::::VA:::::::VGE:::LA:::T:::::::E::R:: HQ1693A ::::::::GD:::::::::::::::::::::::G:::::::::::SAT::PT:EESTF:A rrnAC1390 :T::::::E::::::::::::::::::::::D:A::G::::::::P:DA:PKQE:::::T Hmu1900 ::D:::::E:::::::::::::::::::::CD::::GE:::F:::PFE::T::E:::::: hla0067 ::::::E:A:AGKGEDDADDSDAES:V::::D::Y::::::::::A:ES:T::::::::: NP2982A ::::::::::::::::::::::::::::::CD::Y:::::::::::H:::T::::::R:S HVO_1048 ::::::::::::::::::::::::::P:::::P::::E::::::::::D::AAA:::::A Hbo0542 ::::::::E:::::::::::::::::::::::P::::::::::::G:S:::::S:::::: consensus --PDLDDAFEAVVSAPNTASKRWVYRQYDHEVGVRTAMRPGDDAALLAIREA-------- #oth 1242142.2231223.11..11.1........13..253..1...32122.122222222 VNG0864 :::A:GT:ID::L:::::::NE:::::::::::A::VQ:::E:::G::LH:::::::::: Hut1323 ::V::E::V:T:LAS:::::::::::::::::Q::::::::::::::::::::::::::: HQ1693A ::I:AAT::NTII:T::::::::I:::::::::L::::::::::::I::::::::::::: rrnAC1390 ::VS::E:::RI::S::C::::::::::::::Q:::SVL::::::::::::::::::::: Hmu1900 :GVA::::::S::AS:::::::::::::::::Q::::TP::::::V::V:::GAAAGQAG hla0067 PE:S::E:V:S:::::S:::::::::::::::::::::K::::::IM::::TASTDAADL NP2982A :::::ET::::::A:::::::E:::::::::::T:::LK:::::::M:V::::::::::: HVO_1048 ::F::E::::::::D::::::::::::::::::L:::R:::::::::DVP:::::::::: Hbo0542 ::T::TE::::::G:::::::::::::::::::L:::V:::::::VM::::::::::::: consensus -----GTGLALSAGADPNWTDTAPYEGARAVALENATNLAAKGATPLAAVDCLNGGNPEK #oth 222232231.312..2.2..433..3..3.212.....2..1.14.2.1.....1....1 VNG0864 :::DD::TV::::::N:G::ACQ::A::Y:T:V::::::::A::E::::::::::::::D Hut1323 :::ETD:A::I:::::::::::::::::F:AG::::::I:::::::::::::::A::::: HQ1693A ::::::V:::::S::V:A::ESN::K::Q:::::::::V:::::::I::::::::::::: rrnAC1390 ::::::::::F::::::::::A::::::::::::::::V:::::::H::::::::::::: Hmu1900 DDGET:V:::YT:::::::::::::::::::::::::::::::T:::::::::::::::: hla0067 APADQ:V:::::S::N::::E:D:::::::::::::::::::::V::::::::::::::: NP2982A ::::::V:::F:S::::::::::::D::::::::::::I:::::L::::::::::::::: HVO_1048 :::::D:K::FTG:::::::SA:::D::::::F:::::::::::S:::T::::::::::: Hbo0542 :::::NA:::I:S::N::::TC:::D:::::::::::::::::::::::::::::::::: consensus PDVYGGFKGIVDGLADMCRDLDVPVVGGNVSLYNDSVSGPIPPTPTLALVGTKDGYDAPP #oth .2...2.321.3....2.32113.............54...1.....132.3242342.1 VNG0864 :::::::EAM:A::::G::AI:T:::::::::::::AT:::A::::::V::YR:QHPV:G Hut1323 :E:::E:S::::::::A:A::S::::::::::::::ST:::A:::::TM::::P:FS::: HQ1693A :A:::A::D::Q::::::HT:SI:::::::::::::T::::::::::::::::KTF:::: rrnAC1390 ::::::::::::::::::S:::::::::::::::::QD:::::::::::::V:E:::::: Hmu1900 :::::A::::::::::::ST::I::::::::::::::A::::::::::A:::::::E::: hla0067 :E::::::::::::::A:A:::A::::::::::::::E:::::::::::I::RK::N::: NP2982A :::::::R:::N::::::ST::::::::::::::::P:::::::::::MT:::P:::::: HVO_1048 :::::::::::::::::::A:S::::::::::::::::::::::::::M::KA::SS-:G Hbo0542 :::::::::::::::::::::S::::::::::::::::::::::::::V::::A:::::: consensus AAL----SGEGDLLLVGAGADAG-----LGGSEYLAQFGGTDRFPALPD--DP--AAFVE #oth 32111112.113.211.36255232211....221335..1.3..212422441133422 VNG0864 SG:::::A:D:::V:::GH::G-:::::::::V::QAL::::Q:::AD-::--::::G:D Hut1323 MS:::::::::T:V:::DL:IG:DTDPR:::::L::EK::S::::E:::::::::SG:I: HQ1693A :::::::T:D:T:::::HQSNN-::::::::::L:::I::::K:::::S::N:::T:V:D rrnAC1390 LS:::::::::R:VV::DT:LE:KTDPR::::::T:::::::::::::V:::S::TDV:: Hmu1900 MS:::::::::E::::::R:LE:DAEPR:::::::T:::::::::T:L:::T:::D::I: hla0067 :::DADSA:DSE:::I:::GAD:GA::::::::::::A:::::::T:::TETKSL:DR:A NP2982A :::::::::D::::V::D:G:LE::::::::::L::::::S:Q::::::::S::::::I: HVO_1048 LS:::::::::::F:::HSGG:-:::::::::AV:EHA::S:A:::::EDA:A:::TA:: Hbo0542 ::F::::A:::E::V:::SGG:-::::::::::::::M::S:A::E::E::NA::SDVLA consensus TLADVADHDSTLATHDVSHGGLAVTLAEMVTDDAGADVTV----DGLVA--LFEETPGRA #oth 22232.453413.2.1322.....3...112422..4.3233435565221116.41..2 VNG0864 AVREA:TRAD:::V::I:D::::::::::::A::::T:::::::P::A:::::S:C:::: Hut1323 ::::::::ED:::V::A:::::::::::::H:::::A::IDAA::PVG::::CH:Q:::: HQ1693A S::R::N:P:::::::::T:::::::::LI:S::::R:::::::QNKTS::::T:::::: rrnAC1390 :I:E:::A:HV::S::::::::::::::::HE::::S:EIGTTEH:TP:RL::N:R:::V Hmu1900 ::::::NE:A::::::LC::::::G:::::HE:G::S:EIDAPNK:S::EL::G:Q:::V hla0067 S::A::R:E::F::::::D:::::A:::L:::A::::::L::::PDR::::V:::::::L NP2982A AV::I::L:::H::::::::::::A:::L:-G::::::DLAGSP:A:SV::::S:AV::V HVO_1048 :IQA::AD:::V:V::::::::::A:::::::EV::::S::::::DY:S::::::::::V Hbo0542 :::::::AET:::V:E:N::::::S:::::::::::::::::::ESVS:::::D:::::: consensus VVETTDPAAVREAFDGVAPVVELGEATDDGTLSLTVDDEE-------LAYDAADIADLRS #oth .21.2.23.243312132..451.5223134.32313233111111133332331142.3 VNG0864 ::::R:AD:LQA:L:--V:::R::S::T:::::V:::::T:::::::VTR:::T:R:H:G Hut1323 :I:::::::IED::::::::::I:::DASES:D:::GE:S::::::::S::TGA:::::: HQ1693A :I:::::D:::HI:E::::::S::DT:T::::TINI:::DTANESPAVTT:::TV:KQ:R rrnAC1390 :F::::::::::::::::::T:::::N:SNG:DI::N::T::::::::::NV:::::::: Hmu1900 :I::A:AR::::::::::::YD::S:DES:A:D:::NGQS::::::::::N:DE::G::: hla0067 ::Q::::E::A:-LA:EL::LR:::V:T::A:::S:G:D::::::::T:F::DT:RE::G NP2982A :::::::E::K:RL::::::EHI:H:::S:R:E:S:G::T::::::::S:S:::::S::: HVO_1048 ::::::E::L:D-LA:DV::::::TT:::A:::VA::GD::::::::A:::::::::::D Hbo0542 ::::::AD::::::::::::TT::K::E::::::S:EGN:::::::::D:GVEE:::::D consensus VIARELD #oth 21442.3 VNG0864 ::::::: Hut1323 :LED::: HQ1693A ILEDA:E rrnAC1390 ::DD::- Hmu1900 T:TN::E hla0067 ::D:::A NP2982A ::GET:E HVO_1048 :L::::: Hbo0542 :L:Q:::