| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 7139 | VNG2283 | Hut2637 | rrnAC2561 | Hmu2743 | NP0710A | HQ3670A | hla2585 | HVO_0206 | Hbo1333 |
| 5762 | VNG2283 | 7127 | 5347 | 5142 | 5112 | 5106 | 4937 | 5255 | 5155 | 5109 |
| 5928 | Hut2637 | 5347 | 7112 | 5356 | 5460 | 5363 | 4962 | 5334 | 5260 | 5218 |
| 5927 | rrnAC2561 | 5142 | 5356 | 7136 | 5722 | 5547 | 5030 | 5305 | 5363 | 5293 |
| 5722 | Hmu2743 | 5112 | 5460 | 5722 | 7121 | 5188 | 4753 | 5119 | 5204 | 5210 |
| 6014 | NP0710A | 5106 | 5363 | 5547 | 5188 | 7183 | 5070 | 5544 | 5450 | 5384 |
| 5676 | HQ3670A | 4937 | 4962 | 5030 | 4753 | 5070 | 7109 | 5242 | 5546 | 5731 |
| 6118 | hla2585 | 5255 | 5334 | 5305 | 5119 | 5544 | 5242 | 7116 | 5663 | 5568 |
| 6147 | HVO_0206 | 5155 | 5260 | 5363 | 5204 | 5450 | 5546 | 5663 | 7106 | 6154 |
| 6148 | Hbo1333 | 5109 | 5218 | 5293 | 5210 | 5384 | 5731 | 5568 | 6154 | 7326 |
972 symbols consensus ----------------------------------MSDLEEEYRLDYFEEEGFHRKECPSC #oth 1111111111111111111111111111111111..1.231.1.1..121..2.32.331 VNG2283 :::::::::::::::::::::::::::::::::::::::SA:::E:::::::::R::V:: Hut2637 ::::::::::::::::::::::::::::::::::::::::::::E::::H:::::::ME: rrnAC2561 ::::::::::::::::::::::::::::::::::::::D:A:Q:::::::::::Q::V:: Hmu2743 ::::::::::::::::::::::::::::::::::::::AD::::::::K:::E:LT:GT: NP0710A ::::::::::::::::::::::::::::::::::::::D:::Q::::H::::E::::::: HQ3670A ::::::::::::::::::::::::::::::::::::E::S::::E:::T::::::Q::VT hla2585 :::::::::::::::::::::::::::::::::::::::A::::::::::::E::::::: HVO_0206 ::::::::::::::::::::::::::::::::::::E::A::::::::::::Y::Q::VT Hbo1333 VTDSVLDAAQTDARPALSALYPELFYPAVGQSEV::E::S::::::::::::Y::Q::VT consensus GAHFWTRDPDRETCGEPPCDDYSFIDNPGFDEEYSLEEMREAFLSFFEEHDHERIDPYPV #oth 122..11144.12.....121.4..11...33432131..1411.1..321.2111.... VNG2283 ::::::::G::::::::::E::Q::::::::AS:::T:::S:MV:Y::RAG:DS:::::: Hut2637 :D::::L:GA::::::::::E:::::D:::::AFE:G::::Q:::::::::::::::::: rrnAC2561 :DM::S:-VK:::::::::AE:D:::::::::SH::T:::::::::::DR:::::::::: Hmu2743 :D::::::AS:::::::::AE:G:::D:::E:TL:::::::T:::::::R::G:V::::: NP0710A ::::::::SE:DI::::::A::D::GD::::T::::::::::::::::D::::::E:::: HQ3670A DVY:::::::::::::::A::::::::::::DQ:::SG:::E::::::SR::D::E:::: hla2585 ::::::::A:::L::::::E::::::D:::P:A:::S:::::::::::::G::::::::: HVO_0206 :V::::::::::::::::A:::T:::::::::::T::::::K:::::::::::::::::: Hbo1333 D:Y:::::::::::::::A:::::::::::G:::TI:::::E:::::::::::::E:::: consensus AANRWRDDVLLTQASIYDFQPLVTSGQTPPPANPLTISQPCIRMQDIDNVGKTGRHTMAF #oth ......1..............1..1.31...1...31..............1........ VNG2283 :::::::::::::::::::::H::::AS:::::::VV::::::::::::::::::::::: Hut2637 ::::::E::::::::::::::H::::AS:::::::AV::::::::::::::V:::::::: rrnAC2561 ::::::::::::::::::::::::::T::::::::C:::::::::::::::::::::::: Hmu2743 :::::::::::::::::::::H::T::S:::S:::VV::::::::::::::::::::::: NP0710A ::::::::::::::::::::::::::E::::::::::::::::::::::::::::::::: HQ3670A :::::::::::::::::::::::::::::::::::C:::::::::::::::::::::::: hla2585 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_0206 ::::::::::::::::::::::::::E:::::::::V::::::::::::::::::::::: Hbo1333 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus EMMAHHAFNARE--DAGDQYAYEGEVYWKDETVEYCDELFEELGADLEEITYIEDPWVGG #oth ..21.....1112123434...4......322.32.3511232.12332212...1.... VNG2283 ::LG::::::--:::E:TD:::D:::::::TA::H:EG:LADV:VS:D:V:F:::::::: Hut2637 :::G::::::--:::E:TD::::::::::::C::::MD:LA:V:::R:AV:L:::::::: rrnAC2561 ::::::::::::DIEDPE:::::::::::N:::Q::::::::M::N:D::V::::::::: Hmu2743 ::GG::::::--:::E:AG::::::::::E:::Q::V:::::::V:SS:L:L:::V:::: NP0710A ::::::::::::DI:DP::::::::::::S:::A:::Q:LD:::::I:DV:::::::::: HQ3670A :::::::::T::::::S:E:::T::::::::::RL::AF::HM::::T:::::::::::: hla2585 :::::::::T::E:V:E:E:::H::::::::::::::K:::S::::::D::::::::::: HVO_0206 ::::::::::::::E:::K::::::::::::::RL:::F::S::::IS:::::::::::: Hbo1333 ::::::::::::::EVD:::::S:::::::R:::L:::F::HM::::::::::::::::: consensus GNAGPAFEVIYRGAELATLVFMSMEQDPDGDYEMKDGNRYSPMDTYVVDTGYGLERWTWM #oth ....111..1.3.1........2211.22.11.1...12.14..1111.....2...1.1 VNG2283 ::::A::::::::L:::::::::L:R::::E::::::HT:AE::RR:::::::V:::::: Hut2637 :::::::::::E::::::::::QF:R:::::F::::::T::R::RR:I:::::::::::: rrnAC2561 ::::::I::::::::::::::::::::S::E:::::::::::::::I::::::::::::: Hmu2743 :::::C:::::Q:L::::::::QF::::::::::::::S::E::RR:::::::I:::::: NP0710A ::::::I::::::L::::::::C::::::::::L:::::::Y:::::::::::::::::: HQ3670A :::::::::L:::::::::::::::::ES:E::::::::::::::::::::::::::A:V hla2585 ::::::I::::K::::::::::C::R:::::::::::HT::F::::I::::::::::::: HVO_0206 :::::::::L::::::::::::::K::::::::L::::T:::::::I::::::::::::V Hbo1333 :::::::::L:Q::::::::::::::::E:E:::::::::::::::I::::::::::A:V consensus SQGTPTVYEAVYPDMIDFLKDNAGIEHTDEEEELVHRAAKLSGRLDIDEVDDVEAARDDI #oth ....1.....1..12.4..22211232133.431133.1211.41...12212241.332 VNG2283 ::::::::::::::T:::::EQ:::::::::A::::::S:HA:N::::::A:I:D::AG: Hut2637 :::::::::::::::::::T:::::D::AD:::I::K:::::::M::::AE::::::::: rrnAC2561 ::::::::::::::::A:::::::::L:::::RI::E::::A::M::::AE:I::E::T: Hmu2743 ::::::::::I::E::E::R::::LDY::::D:I:F:::::A:HM::::AE:::::::TM NP0710A :::::::::::::E::S:::::::LDYS:R::S::N:::R:::K::::D::::::::::: HQ3670A ::::::::::::::T:E:::ND:DVT::TD:K::IQQ::M:::Y:::::I:NLAS::A:V hla2585 ::::A:::::::::A:::::E:::::::EA:QK:::::::::::::::D::::::::GE: HVO_0206 ::::::::::::::::E:::::V:::::::::::I::::::::H:::::I::LAT::AEV Hbo1333 ::::A:::::::::::Q:::E::::SL:A::::::::::::::Y:::::::::YE::V:: consensus ADELGVDTDRLRELVEPLEDIYAIADHCRTLAYMFGDGIVPSNVGTGYLARMVLRRTKRL #oth .3221.2442133.22...1.......2.1....1..1...........1.......1.. VNG2283 :A:::::AE::T:::A:::::::::::S:V:::::::::::::::::::::::::::::: Hut2637 :A:I::A::::::::::::S:::::::S::::::L::::::::::::::::::::::::: rrnAC2561 :A:V::EVEEM:D:MA::::::::::::::::::L::::::::::::::::::::::::: Hmu2743 :EQ:::E:A::V::M::::::::::::S::::::L::::::::::::::::::::::::: NP0710A ::::::E::E::A:::::::::::::::::::::L::::::::::::::::::::::::: HQ3670A ::::D::PSV:TD:L::::S:::::::Y:::::::::E:::::::::::T:::::::Q:: hla2585 ::R:D::VN::::::::::S:::::::S:::::::::::::::::::::::::::::::: HVO_0206 :G:::::EAE:TS:LR:::::::::::::::::::::::::::::::::::::::::::: Hbo1333 :::::::A:E:A::LR:::::::::::::::::::::::::::::::::::::::::::: consensus VDDVGVDAPLDELVDMQAERLGYENRDTIRDIVRTEVEKYRETLERGGRRVEQLADEYAD #oth 2.52.2.1..........1..2.2....1.2...1.21..11..2..4.2.23..11..3 VNG2283 :::I:A:V::::::::::D:::::::::::S:::S:::::G::::::::::::::E:::: Hut2637 ::E::::::::::::::::::::D::::::::::::::::::::D::H:::::::E:::: rrnAC2561 ::G::::::::::::::::::D::::::::::::::::::::::D::::::R:::::::E Hmu2743 ::T:::::::::::::::D::::D::::::::::::::::::::D::::K:R::::D::E NP0710A A:G::::::::::::::::::D::::::V::::::::::::::::::R:H::R::E:::Q HQ3670A I::I:I::::::::::::::::::::::::::::::DR::::::S::R::::T::::::: hla2585 ::EI:I::::::::::::::::::::::::E:::::ER:::K:::::S:K::S::::::G HVO_0206 ::NL:::::::::::::::::D:Q::::::::::S:ER:::K:::::S:K:Q::::D::: Hbo1333 ::S::::::::::::::::::E:Q::::::::::::ER:::::::::T:K:QS:::D::: consensus RGEPIPTDELIELYDSHGIQPDMVADIAAERGATVDVPDDFYSLVADRHEDADAA---EA #oth 33111.34112.....1.1..21.32..213.12.13.11..21..3..33434544134 VNG2283 ::::V::::::::::::::::G:::::::DV:::::A:::::::::A::D:G:SGAA:GG Hut2637 S:D:::A:::V:::::::M::ET:EQ:::D::VA:ET:E:::::::E:::::ER:GS:TE rrnAC2561 K::::::S::V:::::::::::::EE::::K:VA::::::::AV::Q::GGD:T:TE::S Hmu2743 KD::::VQ:::::::::::::::::E::::::VD:::::N::G::::::GGGQ:FEE:D: NP0710A K:D:::L::V::::::R::::ET:EE:::DH::D:EI:::::::::E::GE:::DADDGT HQ3670A :N:S::V:::::::::::::::::TE::SD:::::EI::::::::::::T:D:TT::::T hla2585 TD:::::EV:L:::::::::::::::::::::::::::::::A:::::::E::GD::::: HVO_0206 TD::::L:::::::::::::::::Q:::E:::::::I:::::::::::::QV:GE:::GE Hbo1333 :E:S::VT::::::::::::::::::::E::::::::::N::::::::::GEG:T::::: consensus AAERDDRLADLPETEKLYYDDQERTEFEAVVLDVFERE--DG---YDVVLDQTMFYPEGG #oth 664522.231..2.12.1.1124121......11112221213221.11........... VNG2283 DGGG:::::::::::T:::::AYGS:::::::::::::GE::DGAF:::::::::::::: Hut2637 ESDT:E::::::::::::::::T::::::::::::::A:::::::::::::::::::::: rrnAC2561 QTPYE:::EE::::DR:::E::Q:::::::::E::D:D::EDT::::::::::::::::: Hmu2743 TVPHEK::DE::::DR:::E::Q:M:::::::E::D::::::D::::::::::::::::: NP0710A L:GD:::I:::::::::::EEP:::D::::::::I::DA:::ETV:::A::::::::::: HQ3670A IEK:R:::::::::DR::::::TG:::::::::I::QD::T::::::I:::::::::::: hla2585 :::::::FD::::::::F::::G:::::::::::::L:::E::::::::::::::::::: HVO_0206 :D::::::G:::A:D:::::::::::::::::::::::::E::::::::::::::::::: Hbo1333 :E::EE::::::D:::::::::::::::::::::I:::::E::::::::::::::::::: consensus GQPADHGTLSTDDVTVEVTDVQERDGVVLHRTDEDPGKGEFVRGQVDAERRRRLMAHHTA #oth ...1.4.312221423213..14521.11.22122..1.1.1...2.34..2..12.... VNG2283 :::::T:V:TG::H::D:I:::::::::::::TDN::::::::::I:T:::::::::::: Hut2637 :::P:Q:::::::E::::::::IQ:::I:::::A:::T:D:::::::GR::::::::::: rrnAC2561 :::P:K::::::::SA::::::QYGD:IV:TC:D::::::::::::::T::Q:::Q:::: Hmu2743 :::P::::I::::::G::::::VHG::IV:TC:::::T::::::::::T::::::R:::: NP0710A :::::T::::::::AA:::::::TN:::::::::A::::::::::I:GV::::::Q:::: HQ3670A :::::::::T:EEE:I:I:::KAQ:::I::QAT:N::::D:I:::L:V:::::::Q:::: hla2585 :::::R:Q:TAGET::D:V:::::N::::::::A:::::::::::::GD::D::R::::: HVO_0206 :::::::S:A:::T::::::::IVGD:::::::::::::::::::L:::::::::R:::: Hbo1333 ::::::::I::::K::Q:S:::I::::::::::::::::::::::L:V:::::::R:::: consensus THIVGHAARQVLGDHVRQAGAQKGTDSARIDIRHYERISREEVKEIERVANEIVRDNIPV #oth ..212111.3...2.1.....1..2111.2.21.11213.24113..32..31133144. VNG2283 ::::VY:::::::E::::::::::V::S:::VT::::VD::T:::::::::::::A:TS: Hut2637 ::::V::::::::::I:::::::::::::::V::::PV::AA:::::::::D::T::AQ: rrnAC2561 ::::I:S::::::E::::::::::::::::::::::SV:::K::::::L::D:IQ:::T: Hmu2743 ::V:I:S::::::E:::::::::::::S::::::::S::::Q:::::HR:::::M::AA: NP0710A ::::::::::::::::::::::::VE:::F::::::::::::::R::::::N::T::L:: HQ3670A :::I:::::K:::::::::::::::::::F:LT:::::N:I:A:T::S:::D:I:Q::S: hla2585 ::LI:::::E:::N::::::::::I::S:L::::F:::T::Q:::::::::AL:::DV:: HVO_0206 ::VI:::I:T:::::I:::::S::V:RS:L:VT::D::T::::TQ:::::::::MR:::: Hbo1333 ::V::::::::::::I::::::::::R::F::T:::::T:::::Q::Q::::::MQ::A: consensus KQEWPDRHEAEAEYGFDLYQGGIPPGEQIRLIHVGD-DVQACGGTHVARTGDIGAIKILN #oth 411..1.21..541...1....1.2.321.2121321.1...1....61..11.21.213 VNG2283 QC::::::::::::::::::::::A::::::V::D::::::::::::::::E::S::::: Hut2637 T:::::::::::::::::::::::A:::::::::E::::::::::::S:::EV:::::RS rrnAC2561 S::::::ND::ER:::::::::::A:::::::T::::::::::::::::::::::V:L:: Hmu2743 T::::::::::KAH::::::::::T:::::::::A::::::::::::G:::::::::L:: NP0710A :::::K:N::::D::::I:::::::::TL:::Q::E::::::A::::LQ:::::T::::S HQ3670A R:D::::::::N:H::::::::::::QN::T:TI::::I::::::::T::::::T::::T hla2585 R::::::N:::S:H::::::::V:::TN::::::::E:::::A::::E:::E:::V:V:K HVO_0206 :::::::RD::KK::::::::::::::::::::::S:::::::::::K:::::::V:V:T Hbo1333 :::::::::::DK:::::::::::::RN::V:T::::::::::::::K::::::S::::T consensus TERVQDGVERLVFAAGDAAIEATQRTEDALYEAAEVLDVAPEDVPETAERFFTEWKERGK #oth 1.11...12.21....4..1111142..1.231.232..4143..2..2...3...3... VNG2283 A::::::::::T::::A::V:HV:GQ::D:RA:::::::T:AE:::::::::::::D::: Hut2637 :::I::::V::T::::E:::::::A::::::::::AF::D:Q::::::::::A::::::: rrnAC2561 :::I::::I::T::::N:::::::::::::T:::DI:::::DA:::::::::D:::A::: Hmu2743 :::I::::I::T::::::::D::HEI::::::T::LY:::T::::D::A:::D:::A::: NP0710A :::::::::::::::::::::::::::::::DT::::::S:QE::A::::::E:::D::: HQ3670A ::P:::::::I:::::::::D:V:T::::::D::D::::T::H:::::D::::::::::: hla2585 ::P:::::::I:::::G::V:::::::::::D::RA:::D:L::::::::::E:::G::: HVO_0206 ::P:::::::V::::::::V:::::::::::G::D::::N:A:::::::::::::::::: Hbo1333 ::P::::I::I:::::::::::::E::::::::::::::N:::::D:::::::::::::: consensus EIERLKEELAEARASGGADGEEVDVDGTTAVVQRVDGDMDELRATANAIVDEGKVAVLGS #oth 2.16.131..11..322445211323132..12121111.1.111...3114151..1.. VNG2283 T:DD:::Q:::::::::GA::::::A::::::::::::::::Q:::::L::G:Q:::V:: Hut2637 :::A:RA::::V::::ASE:::::L::::::::::::E:::::::::::A:S:S:::V:: rrnAC2561 :::Q:::Q:::::::::G:N:::G:GDA::::G:I:A:::::::Q:::::EQ:NI::::: Hmu2743 :::D:::Q:::::::::G:S::IE:AD:::::::I:A:::::::Q:::V::Q:SI::::: NP0710A R::E:::Q::::::H::DG:::::LG::::::::::::::D:::::::L:ED:T:::::: HQ3670A T:DK::S:::::::Q:-VTADA:SI::ID::IKT:N::A::::K::::::::DA:::::: hla2585 :::S::::::A::::::::A:::EIG:V:::I::L:::A:::::::::H::D:::::V:: HVO_0206 T:D:::T:::::::AA:::--:I:I:::P:::::L:::A:::::::::L:E::::::::: Hbo1333 T:D:::S:::::::A--:ET::I::S::P:::::L:::A::::::::::::::::::::: consensus GADG-AQFVVGVPDGVGVNAGEVVGELAARVGGGGGGPPDFAQGGGPDADALDDALDAAP #oth 23211.2...21.122311..4..12..33........2........1123.141.23.2 VNG2283 ::::::::::::::::P::::::::::::M:::::::::::::::::::ER:::::SR:A Hut2637 A:::::::::AA:E:S::D::S::S:::D:::::::::S::::::::::::::A:::::: rrnAC2561 :L::::::::S:::::D:D:::::::::G::::::::::::::::::::::::::::D:: Hmu2743 ::S:::::::A:::::A:::::::::::G:::::::::S:::::::::::K:::::AD:: NP0710A :D:S::T:::A:::N:DI:::A::::::D:::::::::::::::::::V:S::E:::::: HQ3670A DV::S::::::::EDI:I:::D:::Q::RK:::::::::::::::::::AS:EV:::D:T hla2585 ::::S:S:::::::::D::::Q::S::::::::::::::::::::::::::::::::::: HVO_0206 A:G:S:::::::::D::I:::Q:::R::GK::::::::A:::::::::V::::G:::E:: Hbo1333 A:G:S:::::::::N::I:::::::Q:::S:::::::::::::::::NVEK::ET::E:: consensus DVLRQVANA--- #oth 21.133442211 VNG2283 :::GDA:S:E:: Hut2637 ::::::MRPSDR rrnAC2561 EI::T::::::: Hmu2743 EI:::::::::: NP0710A EI::SMLE:::: HQ3670A S:::SMHET::: hla2585 ::::SLQE:::: HVO_0206 ::::T:L::::: Hbo1333 ::::::LD::::