|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 4069 | NP5070A | HQ1341A | VNG2045 | hla0885 | HVO_1895 | Hbo1773 | Hut2661 | rrnAC2490 | Hmu2696 |
3111 | NP5070A | 4090 | 2663 | 2525 | 2818 | 2727 | 2815 | 2928 | 2834 | 2815 |
3022 | HQ1341A | 2663 | 4040 | 2419 | 2802 | 2785 | 2983 | 2741 | 2670 | 2595 |
2842 | VNG2045 | 2525 | 2419 | 3663 | 2602 | 2494 | 2664 | 2589 | 2583 | 2531 |
3123 | hla0885 | 2818 | 2802 | 2602 | 4354 | 2916 | 2907 | 2786 | 2680 | 2631 |
3237 | HVO_1895 | 2727 | 2785 | 2494 | 2916 | 4212 | 3198 | 2817 | 2877 | 2836 |
3488 | Hbo1773 | 2815 | 2983 | 2664 | 2907 | 3198 | 4127 | 3023 | 2926 | 2860 |
3337 | Hut2661 | 2928 | 2741 | 2589 | 2786 | 2817 | 3023 | 4217 | 3127 | 3082 |
3342 | rrnAC2490 | 2834 | 2670 | 2583 | 2680 | 2877 | 2926 | 3127 | 4202 | 3154 |
3231 | Hmu2696 | 2815 | 2595 | 2531 | 2631 | 2836 | 2860 | 3082 | 3154 | 4183 |
622 symbols consensus -MRILGIEGTAWAASAAVFET----------------ATDHVFIESDAYQPDSGGIHPRE #oth 11.221111111211123233322332211222222254252312222141211121111 NP5070A MT:V::::::::C::::::DA::::::::::::::::E::A:::D::::V:E:::::::: HQ1341A :::::::::::::::::LYN:::::::::::::::::HDETIV::::P:::::::L:::: VNG2045 :::------------------::::::::::::::::----------------------- hla0885 :::V::::::::C::::LYDA::::::::::::::::E::S:L:::NP:E:::::::::: HVO_1895 :::::::::::::::::::::DDPDALRSGTGRTPDP:V::::::::P:::::::::::: Hbo1773 ::::V::::::::::::L:D::::::::::::::::::::E::::::P:E:::::::::: Hut2661 ::::::::::::::::::Y:RTD::::::::::::::SGES:V::T:::E:::::::::: rrnAC2490 ::::::::::::::::S::::PDPARVT:::::::::DD::::::T:::A:::::::::: Hmu2696 :::V:::::::::::::I::ADESEL::::RDPSAAASG::::::T:::::::::::::: consensus AAEHMGEAIPEVVETALDHARERAGD-----DAPPIDAVAFSRGPGLGPCLRIVGTAARA #oth 1111132.2.5.122213425364653221134551.11..1..........1111...2 NP5070A :::::R::V:S:::A::::VESNW:::::::P:DA::::::::::::::::::A:::::S HQ1341A :::::ST:L:::IS:I:ER:VSSGNT:::::::IG:::I:::::::::::::V::::::T VNG2045 ------::::A:I::V:GA:DGD---:::::----::::::::::::::::::::S:::: hla0885 :::::S:::::::DAV:TT:EAEH:P:::::::--::::::::::::::::::::::::S HVO_1895 ::::::T::::::::::E::AA:HDG::::::G:VV:G:::::::::::::::::::::S Hbo1773 ::::::D:::A::S:V::::V:T:EG::::::S:E::G:::::::::::::::::::::S Hut2661 :::::R::::Q:::R:::I:::Q:A:AGEDP:ES:V::::::::::::::::::A::::: rrnAC2490 ::::::::::T:::::IE:THG:::RDGD:::SA:::::::A::::::::::::A::::: Hmu2696 ::::::::::K:::R:::::::::P:TE:::TG::::::::::::::::::::::::::: consensus LAQTLDVPLVGVNHMVAHLEIGRHQSGFDSPVCLNASGANAHLLGYHNGRYRVLGETMDT #oth 11121111.2.....1....1..12...44.1...1......2.1.1311.1.......1 NP5070A ::G::SC:::::::::::::::::R:::E:::::::::::::V::::::::::::::::: HQ1341A :T:A:S:::I:::::I::::::::::::TT:::::::::::::::::RRQ:Q:::::::: VNG2045 :::A::::::::::::::::::::::::QQ::::::::::::V:A:R::::::::::::: hla0885 ::G:::::::::::::::::::::::::EN:::::T:::::::::::D:::::::::::A HVO_1895 V::::::::L:::::::::::::Y:::::::::::::::::::::::::::::::::::: Hbo1773 :::::::::::::::::::::::Y:::::::::::::::::::::::::::::::::::: Hut2661 :::R::::::::::::::::::::R:::SA::::::::::::I:::R::::::::::::: rrnAC2490 V::RF:::::::::::::::V:::R:::::::::::::::::I:::R::::::::::::: Hmu2696 V::RF::A::::::::::::V::YF:::S::I::::::::::V:::RS:::::::::::: consensus GVGNAIDKFTRHVGWSHPGGPKVEAAAR------DG--EYHDLPYVVKGMDFSFSGIMSA #oth .....1......2..4........62.31111111.113142...............1.. NP5070A ::::::::::::::::::::::::SH:E::::::::::D:VE:::::::::::::::::: HQ1341A ::::::::::::L::N:::::::::::T::::::::::S::::::::::::::::::::: VNG2045 :::::::::::::::Q::::::::TH::::::::::::::TA:::::::::::::::::: hla0885 :::::::::::::::D::::::::::::RYAEGN::PEDLL::::::::::::::::S:: HVO_1895 :::::L:::::::::T:::::::::::E::::::::::D:VE:::::::::::::::::: Hbo1773 :::::::::::::::T::::::::R::K:::::::::::::::::::::::::::::::: Hut2661 ::::::::::::L:::::::::::KR:K::::::::::::I::::::::::::::::::: rrnAC2490 ::::::::::::I:::::::::::QH:::::::::::::::E:::::::::::::::::: Hmu2696 ::::::::::::::::::::::::DH:T::::::R:::T:V::::::::::::::::::: consensus AKQAVDDGVPVEDVCRGLQETIFAMLTEVAERALSLTGADELVLGGGVGQNARLREMLAE #oth .1115.3121.321.5111.22....1..1....1..131...1....1..3..13..45 NP5070A ::::Y:::T::A:::C::::::::::A::S:::::::::::::V::::A::S::Q:::TQ HQ1341A ::D:::NE:::V:::T::::::::::::::::::::::SN:::::::::::D::::::ST VNG2045 ::D::::::::A::::::E::M::::::::::::A:::R::::::::::::D:::G::EA hla0885 :ND:Y:::::::EI:FS:::HV:::::::S::::::::::::::::::A::D:::::::S HVO_1895 ::DEA:A:T::P:I:A:::::V::::::::::::::::T::::::::::::::::::::: Hbo1773 ::::S::::::::::C::::::::::::::::::::::T:::::::::::::::::::S: Hut2661 ::::I:::EA:::::YS:::N::::::::::::::::D:::::::::::::E::::::GK rrnAC2490 ::::::::::::N::::ME::::::::::S::::::::::::::::::::::::QR::G: Hmu2696 ::::T:R:T:::::::::E::::::::::::::::::D:::::::::::::E:::S:::: consensus MCDQRGADFYAPEPRFLRDNAGMIAVLGAKMYAAGDTIPIEDSAVDPNFRPDQVPVTWRD #oth ..32.1.5111.12...........3...2.23..2222141.312131...2.5.1.13 NP5070A ::EN:::AI:V:::::::::::::::::::::E:::I:S:PE:G:R:D::::E:::S::: HQ1341A ::TA:::S:::::S:::::::::::::::A::E::Q::SVN::::::T::::A:T::::: VNG2045 ::AA:::S:H:::::::::::::::::::::A:::A:::VA:::INSQ::::E:S::::: hla0885 ::AA:::R:H::DS:::::::::::::::::AQ::::V::SE::I::::::::::::::S HVO_1895 :::::::K:H:::::::::::::::A:::R:L:::::LAV:E:T::::::::::D::::G Hbo1773 :::::::::::::::::::::::::::::R:L::::VL::S::::N::Y::::::::::: Hut2661 ::::::::::::::::::::::::::::::::D::::::::::R:R:D::::E:D::::S rrnAC2490 ::E::E:E:::::N:::::::::::M::::::::::::A::::RI:S:::::E:A::::G Hmu2696 ::T::::E:::::::::::::::::I:::R:::::::LS:P::GI:SD::::::E:::DA consensus DEES-----------V---RAPGADDK----RQGAEATVTF--------EDDRVIKRRVP #oth 314211111111111153216433345121121....3.43111111114334.3.2.41 NP5070A ::AV:::::::::::A::::PVPT:ER::::::::::V:DI::::::DADGG::T:::LE HQ1341A ::T:::::::::::::T:::T:ATL::TP::VR::::I:RR::::::::IN:H:V::::E VNG2045 P:SP:::::::::::A::::D::::AV::::::::::::::::::::::A::A:::E:A: hla0885 G:SV:::::::::::ARG:::::S:::TDAD:R::::::EIVPSGEPDAA:R:::::::: HVO_1895 AD::::::::::::::A::::YTD:GA::::IR::::::DI::::::::GTEE:V::::: Hbo1773 ::::::::::::::::A:::D:T:EG:::::IR:::::::::::::::::::S:V::::: Hut2661 ::AVGSWGGSSDDGT:GARDGA::::A::::V::::::::V::::::::::G::R:E:Q: rrnAC2490 P:::::::::::::::DSY:MG:DE--::::V:::::::H:::::::::DG:::::V::: Hmu2696 G:PV:::::::::::A::::VG:DA:E::::I:::::L:R::::::::::G:::::E:R: consensus KSYRHPELDDRLRRERTRAEARLTSEARRAGVPTPVVRDVDPQEGRIVFQRVGDADLAEA #oth 13...25..32..42..25......3..16..2..113.1.1642212113..231.243 NP5070A :A::::V::S:::SQ:::S::::::::::Q:::::::Y::::DA::L:::Y::::::KT: HQ1341A ::::::K::R:::A:::::::::::A:::L:::::LIF:A::ET:TL::EY::ET:::AD VNG2045 :A:::DR:::::::D::VL::::::D:::Q:::::L:::::VPAAT:TL:H::::::RD: hla0885 :E::::G::RT:::D::V::::::::::Q:::T::L:Y:A:VPNATLTL:Y:::R:::A: HVO_1895 :T:::::::::::::::KT::::::D::::::R:::::::::VD:V:A:::::::::::R Hbo1773 :T:::A::::K::K:::::::::::Q:::E::::::I:::::T::V:::ES::KS:::G: Hut2661 RT::::T::E:::T::::E::::::::::V:::::::H:::::::VL::E:::ER::R:: rrnAC2490 R:::::T::E:::T::::Q::::::::::N:::::L::::::::S:::::::::T::R:G Hmu2696 R:::::K::E:::S::::Q::::::::::H::::::IH::::RDA:::::::::RE:RDG consensus LT--EERVRAVGRHLARIHDAGFVHGDPTTRNVRVGA-------------------DRTF #oth .211441123..33.123.31.1......1.....2522331111111111111123334 NP5070A :S:::SA::D::::::AC:A:::::::::P::::::E:::::::::::::::::::::A: HQ1341A ::::VS:CH:::Q::G:::N:::::::::::::::DS:::::::::::::::::::AQNY VNG2045 :S::PA::::::::::T:::G:::::::::::::::::::::::::::::::::::E::: hla0885 :DGGT:::A::::Y:::L::::I:::::::::::::VGDSDTQTGDGEANGTTAVD:::A HVO_1895 :D::P:A::V::EY:::L:E::I:::::::::::::TGPDG::::::::::::::DP:VY Hbo1773 ::::T::C:T::K:::TV:::::::::::::::::D::::::::::::::::::::EK:Y Hut2661 ::::LD:::D::::::T::::::::::::::::::SE::::::::::::::::::::::H rrnAC2490 :S:::G::AD:::W::::::::::::::::::::::GRDEQ::::::::::::::A:::T Hmu2696 :::::::::::::Q::A::::::::::::::::::::GD:::::::::::::::::PGV: consensus LIDFGLGYYTGHVEDHAMDLHVFAQSLAGTADDPEPLIAAFEDAY-------REAG--DD #oth ......111.332..1...1..1411161.131133135.3131.111111123424444 NP5070A ::::::::::DA:::Y:::::::EGA:G::::::TAQ:T::::::::::::::S:::::G HQ1341A ::::::::H:D::::::::::::I::VT:::S::A:::T:::SG::::::::A:T:::IS VNG2045 ::::::::::DA:::Y:::C:::E:::V:::A:ADA:V::::::::::::::E::AA:SG hla0885 ::::::A:H::::::::::::::EG:VRA::I::D:::E::::G::::::::ATV::::: HVO_1895 :::::::FH:::::::::::::::::VQ:::A:AD:::D:L:AG::::::::EAV:::SA Hbo1773 :::::::::::::::::::::::G::VE:::AE::::LQ:::EG:AAVARDGE:G:GP:E Hut2661 ::::::::::::A::::::::::::::::::::::A:RS:A:::::::::::::TADEGG rrnAC2490 ::::::::::QEA:::::::::L::::::::::::T:LS:A::::::::::::TESDHA: Hmu2696 ::::::::::RDT:::::::::LD::::::T::A:R:R::VA:::::::::::T:SER:: consensus AVLDRLRDIEGRGRYQ------ #oth 4.423.131.3....2111111 NP5070A ::V:H::E::T::::::::::: HQ1341A T:QS::::::S::::H:::::: VNG2045 R:::Q::AV:::::::DDPETA hla0885 D:::::::V::::::R:::::: HVO_1895 E:IA:::EV:S::::R:::::: Hbo1773 D::A:::QV::::::::::::: Hut2661 :::::::E:::::::::::::: rrnAC2490 ::FAS:D::::::::::::::: Hmu2696 T:::::DA::D:::::::::::