| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 2853 | HQ2231A | hla1458 | Hut1742 | HVO_1239 | Hbo0308 | NP0888A | VNG2419 | rrnAC0651 | Hmu1983 |
| 1650 | HQ2231A | 2960 | 1295 | 1342 | 1283 | 1259 | 1410 | 1446 | 1450 | 1541 |
| 1961 | hla1458 | 1295 | 3045 | 1734 | 1699 | 1621 | 1455 | 1392 | 1301 | 1477 |
| 2009 | Hut1742 | 1342 | 1734 | 2915 | 1816 | 1643 | 1542 | 1356 | 1349 | 1523 |
| 2003 | HVO_1239 | 1283 | 1699 | 1816 | 2911 | 1848 | 1513 | 1445 | 1382 | 1613 |
| 1882 | Hbo0308 | 1259 | 1621 | 1643 | 1848 | 2906 | 1499 | 1388 | 1338 | 1490 |
| 1969 | NP0888A | 1410 | 1455 | 1542 | 1513 | 1499 | 2885 | 1516 | 1466 | 1665 |
| 1825 | VNG2419 | 1446 | 1392 | 1356 | 1445 | 1388 | 1516 | 2808 | 1541 | 1713 |
| 1795 | rrnAC0651 | 1450 | 1301 | 1349 | 1382 | 1338 | 1466 | 1541 | 2562 | 1703 |
| 2061 | Hmu1983 | 1541 | 1477 | 1523 | 1613 | 1490 | 1665 | 1713 | 1703 | 2885 |
435 symbols consensus ----------D-RRERARLAAVVFAVLFSQVLLYPGVDDLVTALGAGA---DLDAGMWFL #oth 1111111225475421641252133114412121114652173212571116463222.. HQ2231A MSSQFKTGTSTVDT::IL:GS:::::::L:L:V:::::M:::::::PV:::V:RGST::: hla1458 :::::::MTE:DHG::R::G:::L:::I:::::::::PN::V::::P::::GI::::::: Hut1742 ::::::::::-:MT::T:::V::W:::V::::::::LE:T:I:::G:D:::H:L::T::: HVO_1239 ::::::::MDST:::::T::LA:WG::V:::::::::S:::::::G:QGEY::S:::L:: Hbo0308 :::::::::M:R:T::R:::LA:W:::V:::::::::A:::HE::GTG::::VQS::::: NP0888A ::::::::::MS:S::V:::::::::::T:L:V:::::R::DV::GEP:::TV:::TA:: VNG2419 ::::::::::MAT::::A::S:::::::A:::V:::AT:::E:Y::A::::PET:SR::: rrnAC0651 ::::::::::-:------------------------------------:::-----:::: Hmu1983 :::::::::VSE::A:GA::G:::L::LA:::::::I:T::A::::TT:::::Q:S:::: consensus AAEFGAFVLFAGVWGALSDALGRRTPLIVAGALGGAASY---LALAAVP-ALGGSFRAVL #oth 2111211.42241..33..1311.322223..221123.11133225313645551631. HQ2231A :::L::S:::VW:::LI:::RRV:V::LRL:::LA:::::::GG::II:QVVIVP:SGA: hla1458 V:::::::T::V::::A:::::::A:::::::::::::::::I:::::::EFEFG:::A: Hut1742 V:::::::GM:VL::L:::::::::::V::::A:::V:::::::V:::::G:::::DV:: HVO_1239 V:::AS::A:SS:::::::::::::W:::::::::::::VAL::::TL::W:DAT:G::: Hbo0308 V:::A:::T:::::::A:::::::RS:::T::::::LG:::::V:::::::::V::T::: NP0888A GVQLL:::::SA:::::::RA:::::F::L::A::::A:::::V:VGIVV:GI:D::TA: VNG2419 ::::::::A:::::::A::RA:::::F:A:::AA:SLG::::AV::VA::---LGLGGA: rrnAC0651 ::::::::V::::::V::::T:::::Y:AG::GA::VL::::ALI:WL:G:VSL::VG:: Hmu1983 :::::::::C:::::IV:::T:::::Y::::::::::G::::A::LVA::R::PA:PT:: consensus ALRVLQGAATIGAFSLAMTMLMDLSGGHGRNMGAAGIAIGLGAALGAPVGGQLYELDPLA #oth 32.432.23..111..11.3.1..5221.21..1..2...3.1.1.123..4.2334233 HQ2231A :I:AI:::::::VL::::::::::P:::::::::::::::S:T:::::T::L::GQG:FV hla1458 :V::VG::L::::::::I:S::::R::N:::::T::V:::::::V:SV:::A:AD:NAFY Hut1742 V:::IG:GF:::::::SI:K::::A:::::::::::T:::F:::::SI:::G:AT::::: HVO_1239 IV:L:G::M:::::::SI:::A:::::N::::::::::::::::::SV:::::TTI:::: Hbo0308 GI:A:G:TM:::::::S::A:A:::SEN:K::::::::::::::::SV:::R:ADA:::Y NP0888A VV:FVE::F:::::::SI::::::D:::::::::::::::A:::::::::::::::GT:: VNG2419 ::::A::::::::::::::::::::AD::AD:::::::::::T:::::I::::T::A:R: rrnAC0651 :::::::G:::A::::::::::::G::::K::::::::::S:T:::::L::::::IQTTL Hmu1983 G::IA:::M:::::::::::::::D:::::::::::::::S:T:::::L::::::IG::V consensus PLYAAAVLLAVAALLAATVPDRA----PDDGR------VGLGAAVARLRARPALLVPYAF #oth .2232133233312333323.24111114344122122343533276335114241.2.1 HQ2231A ::AT::M:AV:I:::STQLV::I:::::AS:NQSRQTSKTIITI:N:I:ET:E::I:::: hla1458 :V::G:AV::G:G::::::D:KVVTDR:A:AS:GAQND::FRDVL:QA:TTHG:F::L:: Hut1742 ::::G::V::G:::::::::::G::::VGG:L::::::-A:ETVF::I:T:::::::::: HVO_1239 ::::S:AS:TAV:::VT::T::T::::::ST:::::::::V:VVLKK:A::::FA::::: Hbo0308 :::G::T::V:::VIV::::::T::::::GV::::::::R::::LG:::E::E:GI:::: NP0888A :IV:S::::VGV:AVV::I::::::::::G::::::::-S:RD::DCV:R::T:F::F:: VNG2419 ::VVGS:A:::::AVTVRL::N::::::TTTQ::::::SR:S:::LAV:DT::V:::::: rrnAC0651 :::V:ST:SL:V:VA:LL:T::::::::S:::::::::S::A:T:SG:KQ::T:G::::: Hmu1983 :VAG:S:::TCS:V::V::T::::::::T:R:::::::-::::::ESVT:::R:V::::Y consensus GFIDRLTAGFFALVGTLYFRD--AFGLSPGAAGLTLALFFAPFALLQYPFGSLSDRIGRF #oth .12..22..1.2.2.13..13114.3131342.44.12..4...21.1.2.4....2..3 HQ2231A ::::::S::V:::A::::::T::V:N:::A:T:AM:F:::G::::F::::::::::L::A hla1458 ::V::::::::::::VY::Q:PET::::A::::A::::::V:::V::A::::::::V::: Hut1742 :Y:::::::::::A:VA::::::::DVG:AL::V::::::L:::A::::M:N:::::::: HVO_1239 :::::M:::::::::VY:::E:::::VNAAV::GV:::::V::::::::L::::::V::: Hbo0308 :::::M:::::S:::VF:::S::-:::DAFG:::A:FA::F:::V::::L:V::::V::: NP0888A ::A::FA::::G:I::F::::::::D:::SEI::L::C:::::::::::L:T:::::::V VNG2419 :::::F:::::::::::::QS::R:::DA::T:::::::::::::::::::R:::::::T rrnAC0651 ::::::::::::::::::::E::T:E:G::ET:VM::::::::::::::::V:::::::T Hmu1983 :::::F::::::::::::::T::::D:::::T:IV::::::::::::::::V:::::::T consensus VPIVAGSAGYGVAIIGVGLAPTLALAAAGMVLVGVCGALMAPATMALVTDLAAPDERGAA #oth 5.123..431.33232..2..35421323.131.14..111.1.....1.115452..21 HQ2231A F:::F::I:::FSV:A::::::VTIVGVA::T:::V::::S:::::::::::SEAD::V: hla1458 L:V:L::IA::IVT::::V::VYPV:::L::::::::::::::::::::::VE:EA:::: Hut1742 ::V::::LC::::::A:::::VY::::LL::V::I:::AVS::::::::::VPAS::::: HVO_1239 ::V::::ML:::S:VA::V::VFE::::L::V:::F:::V::::::::::::ESG::::: Hbo0308 ::VIV::I:F:LT::V::V::::P::IVS:I::::F:::VS:S:::::::I:D::::::: NP0888A ::::V::::F:L::L:::::::A::::V:::A:::L:::V::::::::::I::::::::: VNG2419 I::A::::L::::VA:::V::G:RV:Q::::T:::L::::::::::::::I:PDT:::VH rrnAC0651 A:::V::VL::LTVV:::Q:::V:I:G:::::T::I::::::::::::S:::VET:::T: Hmu1983 G:::::::C::::VV::::::RIE:VGL:::V::II::::::::::::::::::E::::: consensus MGGFNVFGSLGFLAGFLVGGTVADRFGYLPAFLVAGGLEVAIALLALPAVLRLA--SPGA #oth 111..22..2.1.2.2231.54244411542.232.35.231.23221325346216436 HQ2231A :A:::AT::I:::T:VILA::::GAT:FTTV:VL::AV::TL:AI:A:::F:::::::RT hla1458 ::L::::::::::::::I::SAT:L:::T::::AV::::L::::ALF:::RSI:::-::D Hut1742 :::::::::::M:T:::L::V:SGV:::::::VAV::::I::::::AR::F:MTAGQ::: HVO_1239 L:::::::::::::::::::V:::VV::::S:::V:FA::::::V::R::K::D::--:I Hbo0308 L::::::::::::T::V:::FTTSTADF:T::::V:LS::::::V:ARS:W::SSGGF:K NP0888A :::::I:::::::G:II:::AL:T::D:FA:::::::::IV::V::::VLV:TV:::DPT VNG2419 :A:::IA::::::::IVG::WI:::R:FQD::AI:::A:LVL:AV::::L:A:R::DRRS rrnAC0651 :A:::I:::V:::::I:::::::GA:::PV:::::::T::VL:V::::GL:::E::K:TE Hmu1983 :A:::::::V:::::V:I:::::E:A::VT::::T::I:IG::A:T::VF:HWR::RR:: consensus EAFG----------- #oth 376554543211111 HQ2231A :KQS::::::::::: hla1458 GLL:LGGGTGRSPSE Hut1742 :W:RHAIRDG::::: HVO_1239 D:TQTPSSAD::::: Hbo0308 GIV:SVRD::::::: NP0888A AT::SPE:::::::: VNG2419 :---::::::::::: rrnAC0651 D:V:G:::::::::: Hmu1983 APSA:::::::::::