| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 3961 | VNG1647 | hla1310 | NP3342A | Hut1984 | rrnAC1518 | Hmu2095 | HQ3167A | HVO_2454 | Hbo2344 |
| 2732 | VNG1647 | 3969 | 2425 | 2421 | 2460 | 2418 | 2387 | 2306 | 2454 | 2408 |
| 3035 | hla1310 | 2425 | 4170 | 2608 | 2558 | 2597 | 2526 | 2619 | 2664 | 2710 |
| 3052 | NP3342A | 2421 | 2608 | 4011 | 2806 | 2835 | 2767 | 2481 | 2525 | 2681 |
| 3220 | Hut1984 | 2460 | 2558 | 2806 | 4121 | 2985 | 2962 | 2576 | 2611 | 2726 |
| 3199 | rrnAC1518 | 2418 | 2597 | 2835 | 2985 | 4037 | 3093 | 2592 | 2479 | 2678 |
| 3180 | Hmu2095 | 2387 | 2526 | 2767 | 2962 | 3093 | 4066 | 2548 | 2474 | 2671 |
| 2948 | HQ3167A | 2306 | 2619 | 2481 | 2576 | 2592 | 2548 | 4395 | 2690 | 2984 |
| 2970 | HVO_2454 | 2454 | 2664 | 2525 | 2611 | 2479 | 2474 | 2690 | 3953 | 2919 |
| 3137 | Hbo2344 | 2408 | 2710 | 2681 | 2726 | 2678 | 2671 | 2984 | 2919 | 4079 |
610 symbols consensus MT--------MLDISREEFVD-----LADADGPVVVRLAAELDADVEPLAAYAALTGR-- #oth 214231111252341232.1311112434424.32314312.23313..2..21123333 VNG1647 --:::::::::IETD::T:TA::::::::-:::AI::V::D::I::A::T::D::VADA: hla1310 ::ESA::::TPI:R:KA::::::::LA:::EK:A:::AS:S:::::T::::::T:V:E:: NP3342A --:::::::::PV:::S:::E:::::::GDE-:A:I::V:::::A::::E::::::::TT Hut1984 ::G:::::::EPSL:HDA:::::::::::::E:G:I:V:V::::::D:::::::V:::ES rrnAC1518 ::::::::::-:::::::::E:::::H:K::R:::::T:::::V:::::T::::::::TS Hmu2095 V:::::::::-:::D::T::::::::R:T:::::S::AV:::S:::::::::::::::TA HQ3167A ::DST:::::P:SK::SA::SELTES:DSTSE:LIAHIT:S:PT-:T::T:::::AAQ:: HVO_2454 V:::::::::AP:TD:::::S::::LAG:::::::TH:V:D::VS:D:::::TT:AD::: Hbo2344 V:SVKGVADDR:S:::::::S::::LVESE:::::AH:T:D:PT-TT::T::::::E::: consensus -------SDYGFLLESAEKVASSDPDGAF-APA--TADRHARYSFVGYDPDAVVTVD-PD #oth 14132224312.....1..121.1.3...3126334412...1......14.121.5131 VNG1647 :::::::D:HA::::::::TPA:::::::TPDTTTEET::::::::::::A::::::::: hla1310 :::::::GP:::::::G::::::::::::T:DG::DV:K:::::::::::E:I:S:H::: NP3342A DC:SP::A:HT::::::::::::::::::R:GQ::G::::::::::::::A::::::AGA Hut1984 DSENANADE:A::::::::::::::N::::::S:::D:::::::::::::V::A::E:S: rrnAC1518 DV:AA::N::T:::::::::::::::::::::E:::D:::::F:::::::R:::::T:G: Hmu2095 DG:APGKGGHT:::::::::::::::::::::::::D::::::::::::A:::I::::-: HQ3167A ::::::::E::::::::::TP:::::::::::DYA:::::::F::::::::::I::S::: HVO_2454 ::::::::::::::::::::S::N:Q:::S::::TA::S:::F:::::::E:::::G::: Hbo2344 :::::::::::::::::::T:::::A::::::EHV:T::::::::::::::::I::G::: consensus ETDV-------ETLDDRAADLVTTDG-----GDVLDRLRAALPDVPRRGFPDTDRQTLRG #oth 3333111111146411233443323211222..22141.422.2232111.34..14.5. VNG1647 D:TIT::::::RLR::PIT::LDAPD::HAT::::::::SVM:A::::NI:TE:::L:D: hla1310 R:::TRLGPAA:FVG:ESDGDLGP:A:::::::AI::I:::F:::SL:::::::::I:S: NP3342A :AT::::::::DVI:::YEGFFEPN::::::::TVAT::ET:::::L:N::E::::::Q: Hut1984 G::L:::::::DI::::Y::MLE:N:::::::::::D:::V::::E:::::AH:::::S: rrnAC1518 :SE:::::::::AF:::Y::::::::::::::::V:D::::M:::AL:N::AM:::H:E: Hmu2095 ::S:::::::::VF:::I::::::::::::::::::D::::M:::EL:::::H:::H:D: HQ3167A :VES:::::::K::GG:::KYI::NDDNNSS:::::H::T:M:KF:CV::::D::HR::: HVO_2454 GV:::::::::TD:GGP::EF:GAGD::::::::::S::G::::L::VN::E::::::T: Hbo2344 GAS:::::::::::GG:::RY::P:::::::::::::::G::::L::V::::D:::R::: consensus GLVGFLAYEAVYDLWLDEVGVDRPDTRFPDAQFALTTKTLVFDHAEDTVSLVFTPVVRPD #oth .1....1.1....1..3...32..2143...1.211.3.221.2433214..2..3.333 VNG1647 ::::::::D::::::::::::E::P:PL:::E::V::R:::::R:T:S::::C::-:ADA hla1310 :F::::::::::::::E::::K::E:E::::E:::::R:V:::DK:G::E:::::I:GV: NP3342A ::::::::D::::::::::::E:::S:::::::M:::::::::D:AG:::::C::L:::G Hut1984 ::::::::::::::::::::I::::S:::::::::A:::::::::::::::::::::::E rrnAC1518 ::::::S:D:::::::::::L::::S:::::::V:::S:VR:::V:::::::::::::QG Hmu2095 ::::::::D:::::::::::L::::S:::::::::::T::R:::V:E:AA:::::I:::G HQ3167A :::::::::::::I::N:::::::::QT:::E:V:::::ISI::TDKS::::L::I:A:: HVO_2454 ::::::::::::::::::::RE::::DD:::E:V:::R::S:::R::A:R::C::::S:: Hbo2344 ::::::::::::::::A::::E::E:DT:::::V::::::S:::::E:AT::L::::A:: consensus DDPGAVYDELVAEAERVEAVLRDATDPETGGFRRTDERAGPRDEYEDAVETAKEHVLDGD #oth 111443.1314111311435.32145141221534615112121.14..131144.11.1 VNG1647 :TATD:::A:E:::K::Q:::::::A:A:A:IEV:T::::D::A:T::::::ATA:R::E hla1310 :::AT:::D::::::::G:E::::SP:TPD:I:V:::S:D::EA::E::R:::R:::::: NP3342A :::::L::D:T:::D:::S::AA:ES::::::SPVE:::::QEA:::::::::::::::: Hut1984 E:A::R::::L:AV::::SL:A::G:::::::H:VH:D:::Q::::Q:::R::::::::: rrnAC1518 E:A:ER:G:::::::::::::S:LSPLS::::::E::V::::::::::::R:::Y::S:: Hmu2095 E::R:R::A:LD:V:::::::DG:::L:::S:VPAH:E::::::::::::H:::S::S:: HQ3167A ::::VI::::::::ADIRET:AA::Q:DP:E:LQINSA::SQA:::T::R:::QR::::: HVO_2454 ::::E:::GV:::::::AEK::A:D::AP:::E::G:D::S:E:::A::RKT::::R::: Hbo2344 :::E::::::R::::D:ATA::::ET::::::V::S:SS:::E:::A::RRT:D:::::: consensus IYQGVISRTRELYGDVDPLGLYAALRAVNPSPYMYLLRHDDRTIVGASPETLVSVAGDRV #oth 1..1.1..3.112.22.2311.31..31......11.3111241.........1.41141 VNG1647 V::A:V::::::D::I::RA::D:::::::::::F::A:G:H:V:::::::::A:HD:T: hla1310 ::::::::S:::R:E::S::::::::E::::::::V::::::S::::::::::::Q:::I NP3342A ::::::::::::D::::T::::R:::DI:::::::::DY::LAV:::::::::::R:RE: Hut1984 ::::::::K::::::::::A::DS::SI:::::::::GY::::::::::::::::G::LI rrnAC1518 ::::::::::::::::::::F:E::::::::::::::GY::L::::::::::::::::H: Hmu2095 ::::::::K:::::EM:::A::ES:::::::::::::DY:GLS:::::::::::::D::I HQ3167A ::::::::V::Q::EI:::::::S::E:::::::::::::::H::::::::::::QD::I HVO_2454 ::::::::::K:R:Q:::V::::S::E:::::::F::::G::RV:::::::::::R:::: Hbo2344 ::::::::V:::R:E:::M:::E:::::::::::::::::::H::::::::::::H:::: consensus VSNPIAGTCPRGNSPVEDRRLAGEMLADGKERAEHTMLVDLARNDVRRVSEPGSVRVEEF #oth 22......14..41..1.......1...3............1.......131.111.11. VNG1647 :T:::::::Q::A:::A:::::::::::E:::::::::::::::::::::A::T:S:P:: hla1310 ::::::::::::E:::::::::::::::::::::::::::::::::::::::::I::::: NP3342A M:::::::::::E:::::::::::::::D::::::::::::::::::::::A:::::::: Hut1984 T:::::::ST::::::::::::::::::E::::::::::::::::::::A:::::::::: rrnAC1518 :::::::::::::::::::::::::::::::::::::::::::::::::A:A:::::P:: Hmu2095 ::::::::::::T:::::::::::::::D::::::::::::::::::::A:::::::::: HQ3167A :::::::::S::S::::::::::::::::::::::::::::::::::::AD::::::::: HVO_2454 :V:::::::Q::SG::::::::::L:::A::::::::::::G::::::::T:::::::D: Hbo2344 :::::::::K::T::::::::::::::::::::::::::::::::::::::A:::::::: consensus MNVLKYSHVQHIESTVTGTLAEDADAFDATRATFPAGTLSGAPKIRAMEIIDDLEATPRG #oth .211............1.1.2433.2...1..2......1....1....11121.34..1 VNG1647 :R:::::::::::::::::::A::::::::::A:::::::::::V::::H::AI:::::: hla1310 :::::::::::::::::::::G:::::::::::::::::T::::V::::::EE::T:::E NP3342A ::::::::::::::::::R:R::C::::::::S::::::::::::::::::::::R:::: Hut1984 ::::::::::::::::::::::NS:G::::::A:::::::::::::::::::::::D::: rrnAC1518 ::::::::::::::::::R::::K:::::A::::::::::::::::::::::E::RS::: Hmu2095 ::::::::::::::::::::D:G::::::A::::::::::::::::::::::E::RS::: HQ3167A :::::::::::::::::::::S:::::::::::::::::T::::::::::V:E::TA::: HVO_2454 :SII::::::::::::S:::DA:::::::::::::::::T::::V:::::::::::E::: Hbo2344 :::::::::::::::::::::DEC:S::::::A::::::T::::V::::::::::L:::: consensus VYGGGVGYYSWTGDADFAIVIRTATVED-----GGD----------EDRITVRAGAGIVA #oth 3.......12.3..112..1..11122444343525444221111153332.1....2.. VNG1647 I:::::::F::::::EL::T::SG:ITH:::::T::::::::::::::TL:::::::V:: hla1310 A::::::::A:::::::::::::::LDESPPDAS:PD::::::::::TAV:::::::L:: NP3342A :::::::::::S:::::::::::::::R::::::RGVAG:::::::T:::::Q::::::: Hut1984 I:::::::F::N::::::::::S:A::HGIDAVD:SGEKRT:::::Q:::::Q::::::: rrnAC1518 P:::::::FD:D::T:::::::S::::::::::E::::::::::::R:::::Q::::::: Hmu2095 ::::::::F:::::T:::::::S:::::CDTPA:V:GDR:::::::TQ:T::Q::::::: HQ3167A :::::::::::S:::::::::::::I::NETTRS:THQTESSAETAPSTVR::::::::: HVO_2454 ::::::::::::::::V:::::::::DS:::::::A::::::::::D:A::::::::::: Hbo2344 :::::::::::S:::::::::::::::R:::::R:G::::::::::::V:S::::::L:: consensus DSDPASEYEETEQKMDGVLDAVERIETPA---------------------------D--- #oth ..1.41..2...2..1..14.223126451111111111111111111111223354455 VNG1647 ::::DA::::::A::::::A::D:LR:TD:::::::::::::::::::::::::::-::: hla1310 :::::A:::::::::::::T:ID::REGG::::::::::::::::::::::DGDSLSSDD NP3342A ::::E::::::::::::::E:I:A::::R:::::::::::::::::::::::::::-::: Hut1984 :::::::::::::::G::I::L::::S:D::::::::::::::::::::::::::E:AET rrnAC1518 ::::E:::V::::::::::T:L:E::GEP::::::::::::::::::::::::::V:VAE Hmu2095 ::V:G:::::::N::G:::::::::RA::::::::::::::::::::::::::::A:::: HQ3167A ::::::::H::::::::::S:L:Q:T:KPTEVTQTQTTQTDVDGDRNEETNEHAGDEVKS HVO_2454 ::::TA:::::::::G::::::R:::YGT:::::::::::::::::::::::::::-::: Hbo2344 :::::A:::::::::G:::A::::::RE:::::::::::::::::::::::::TDDGTGG consensus ---AGEEVSR #oth 4336621242 VNG1647 :::D::A:H: hla1310 TLP::T::DE NP3342A ::::EP:DQ: Hut1984 :::PV::::Q rrnAC1518 RAAGH:::T: Hmu2095 ::::N::::: HQ3167A QSSQT::::: HVO_2454 :::--::A:Q Hbo2344 DAPEV:::::