|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2555 | VNG1150 | hla1204 | HQ2889A | HVO_2725 | Hbo2458 | Hut2755 | NP3696A | rrnAC0081 | Hmu1253 |
1930 | VNG1150 | 2572 | 1709 | 1723 | 1760 | 1729 | 1640 | 1739 | 1633 | 1655 |
2040 | hla1204 | 1709 | 2539 | 1872 | 1895 | 1916 | 1574 | 1688 | 1674 | 1636 |
2098 | HQ2889A | 1723 | 1872 | 2545 | 1986 | 2017 | 1640 | 1694 | 1755 | 1661 |
2096 | HVO_2725 | 1760 | 1895 | 1986 | 2563 | 2098 | 1659 | 1734 | 1682 | 1692 |
2119 | Hbo2458 | 1729 | 1916 | 2017 | 2098 | 2561 | 1639 | 1695 | 1731 | 1692 |
1920 | Hut2755 | 1640 | 1574 | 1640 | 1659 | 1639 | 2571 | 1767 | 1795 | 1822 |
1962 | NP3696A | 1739 | 1688 | 1694 | 1734 | 1695 | 1767 | 2499 | 1799 | 1893 |
1989 | rrnAC0081 | 1633 | 1674 | 1755 | 1682 | 1731 | 1795 | 1799 | 2561 | 1897 |
1944 | Hmu1253 | 1655 | 1636 | 1661 | 1692 | 1692 | 1822 | 1893 | 1897 | 2526 |
348 symbols consensus MSSEAREERVLEAIRARRELVNDAIDEDLPVQEPERLYEASRYLLDAGGKRLRPTVLLLT #oth 125434454.23.142..43..2.23331.134.23..1.1..112........1231.2 VNG1150 ::Q::::RA::A:V:E::QQ::::::D::::A:::::::::::I:E::::::::A::::: hla1204 :T::TK:A:::::::E::::::A::::E::::H:::::::T::I:E::::::::::TT:A HQ2889A :::D:T:::::::V::::T:::::L:T:V:M:S:::::::T::::E::::::::::A::: HVO_2725 :TPD:T:K:::::::E::::::::L:::V:MA:::::::::::::K::::::::::S::: Hbo2458 :::::T:::::D:VK:::::::::L:::V:MAD:::::::T::::E::::::::::T::: Hut2755 :TDTVDSQA:M:::EW::GQ:::::P:N:::V::KK:::::::::::::::::::I:::V NP3696A ---MTSADH:ES::AE:::I::E:VS:Q::::K:::::S::::::::::::::::I:::A rrnAC0081 --MSE:HQQ:ED::V:::DR::::LP::::::K:DH:::::::::::::::::::::::V Hmu1253 ---M::Q:D:EA::V::::Q:::::ERE:::D:::E::::::::M::::::::::M:::A consensus AESLADVDPLSADYREFPALDGDEIDVMSAAVSIEVIQSFTLIHDDIMDDDDLRRGVPAV #oth ..122124141311.4.1334.552.113..22..2..1..........1.11...1... VNG1150 ::A:::TSD-TPP:::::DCI:GHV:::::::::::::::::::::::::::::::S::: hla1204 ::AVTGT::::::F:::A::::NTV:::R:::A::::::::::::::::E:::::::::: HQ2889A ::::::::::T::::S::::::S:V::::::T:::::::::::::::::::::::::::: HVO_2725 :::::::E:M:E:::A::T:A::P::::V::::::::::::::::::::::::::::::: Hbo2458 ::A:::AE:::E:::S::::::AD::::A::::::::::::::::::::::::::::::: Hut2755 :::I:::L:R:EP::::::AE:-P::M::::::::I::::::::::::::::M::::::: NP3696A :::::::E:::::::Q::S:P:::V::L:::::::::::::::::::::::::::::::: rrnAC0081 ::::L:::::T::::D::T:E:GQA:M::::LA:::::T::::::::::::A:::::::: Hmu1253 :::::::A:Q:T:::S::TVE:::::::R:::G::T:::::::::::::::::::::::: consensus HREYDLSTAILAGDTLYSKAFEFMLETGADPERGVEAVRRLATTCTQICEGQALDIEFER #oth .211.31.........11....4124..14332213.434..2...4.....12.12..5 VNG1150 :::::TE:::::::::::::::I::::::P::::LR:M:T::E:::H::::::M::D::T hla1204 :EQ::I::::::::::::::::::T:::S::AN:L::M:M::::::E:::::S::VS::S HQ2889A :::::TE::::::::::A::::LLSN:::::AN::A::S::::::::::::::::V:::H HVO_2725 :K:::N:::::::::::A::::LLTK:::::AD:L::::::::::::::::::::::::: Hbo2458 :K:::TE::::::::::A::::::TQ:::::QN:L::::L::::::K::::::::V:::: Hut2755 :::F:::::::::::::A::::N:::::STGD:S:R:LSE::::::::::::SM:::::T NP3696A ::::::E:::::::::::::::Y::D:::PA::S:::LDE::::::E::::::::VD::N rrnAC0081 :K:::::::::::::::::::::L:::::AH::T:D:NK:::::::R:::::S::::::Q Hmu1253 ::::::::::::::::F:::::Y::D:::KA::S:A:TK:::Q:::E:::::SF::D::S consensus RDDVLPEEYLEMVELKTAVLYGAAASIPAVLLGADDETVEALYQYGLDSGRAFQIQDDVL #oth 15412111..2...1......11112322411221233.11.13..133.31......1. VNG1150 :G::VTD::::::::::::::A:::TL:GL::S::E:::::::N:::RV:Q::::::::: hla1204 :::I:::::::::::::::::::S:AT::::::::::V:D::::::I::::::::::::: HQ2889A ::A:::::::::::::::::::::T:TT:L::D::ADV:D::::::I:A::::::::::: HVO_2725 :TE:::D:::Q:::::::::::T::AV:::VM:::::V::::::::IA::S::::::::: Hbo2458 :TE:::D::::::::::::::::::ATAG::M:::::::::::R::I:::C::::::::: Hut2755 DET:TT:D:::::::::::::A::::::PI:M:E::-Y:DP::::::NI::G::::::L: NP3696A :S::TT::::::::F::::::A:::::::I:::S::::::::HG::::I:::::::::L: rrnAC0081 ::V:T::::::::::::::::::::::::T:::::EQ::D:::N::::V:::::::::L: Hmu1253 :AE:TTD:::D::::::::::A:S:::::Q:M::E:-A::P::G::::V:::::::::L: consensus DLTVPSEKLGKQRGSDLVENKETIITLHARQQGVDVEGLVDADDVEAVTEAAIDAAVAEL #oth ...21.22.........1.3.3.2111..131.11123.1432343422133123..23. VNG1150 ::::::AE:::::::::::D:T:::::::AEH::::D::L::E:PAD:::::VQ:::QA: hla1204 ::::A::E:::::::::::G:::L::::::::::::D::::::TPAE:::E::ED:::A: HQ2889A :::::::Q:::::::::I:::::L:::::::::I:::S:LEST:ID::S:::VEN:::T: HVO_2725 ::::::DQ:::::::::::::::::S:::::::I::DD::::ETA:EL::D:VE:::::: Hbo2458 :::::::::::::::::::::::L::::::::::N::D::A::T::G:::DD:::::::: Hut2755 :::T:::::::::::::::::R::::V:::N::::::N::PT:::D::D::T::E::::: NP3696A :::A::DE:::::::::::::R:V::::::D::I::::::SD:P----SD:E:E:::QT: rrnAC0081 :::T:::::::::::::::::Q:LV:::::::::::GD:::T:S::::S::E::D::ER: Hmu1253 :::T:::::::::::::::E:Q::V::::::::::I::::ET:S::::::SE::D::::: consensus EEAGSIDYARETAEDLIERGKRHLEVLPDNEARDLLEDIADYLIERGY #oth 431...31.133142.2442.62.11..1122.51.221111.13.3. VNG1150 QD::::Q::SDL::::V:E::A::::::E::::HR::Q:::::::::: hla1204 ::V:::A:::::::::TR:S:E:::I::ESGS:E::A:L:::::V::: HQ2889A D:::::E::SN::T::V::A:N::::::::D::S::C:::::::T::: HVO_2725 N::::::::::M::::T:QA:SR:D:::::::::::C:::::::T::: Hbo2458 NKV:::::::DK:QE:TD:A::::::::::D::S::A::S::::S::: Hut2755 :::::::F::::::G::RD:::N::::::::S:::::G:::F::::E: NP3696A :D:::::F:::M:L::VTS::ER:D:::E::::Q:::::::F:V::S: rrnAC0081 R:V:::E:::Q:GQ:::AS::QN::::::::::Y:::G::N::V::D: Hmu1253 :A::::EF:::::H:::AS::DR::::::::P:Q::AG:::::V::E: