|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2398 | VNG2280 | Hut2635 | rrnAC2565 | Hmu2741 | NP0900A | hla0165 | HQ3671A | HVO_0203 | Hbo1330 |
1937 | VNG2280 | 2399 | 1802 | 1817 | 1853 | 1798 | 1812 | 1723 | 1813 | 1779 |
1985 | Hut2635 | 1802 | 2400 | 1980 | 2024 | 1879 | 1763 | 1747 | 1818 | 1828 |
1992 | rrnAC2565 | 1817 | 1980 | 2562 | 2041 | 1893 | 1809 | 1746 | 1853 | 1849 |
1977 | Hmu2741 | 1853 | 2024 | 2041 | 2401 | 1890 | 1792 | 1742 | 1831 | 1819 |
2040 | NP0900A | 1798 | 1879 | 1893 | 1890 | 2418 | 1907 | 1848 | 1914 | 1930 |
2015 | hla0165 | 1812 | 1763 | 1809 | 1792 | 1907 | 2413 | 1904 | 1996 | 1973 |
2051 | HQ3671A | 1723 | 1747 | 1746 | 1742 | 1848 | 1904 | 4866 | 2043 | 2054 |
2174 | HVO_0203 | 1813 | 1818 | 1853 | 1831 | 1914 | 1996 | 2043 | 2438 | 2206 |
2140 | Hbo1330 | 1779 | 1828 | 1849 | 1819 | 1930 | 1973 | 2054 | 2206 | 2432 |
673 symbols consensus --------------------MSEAAAA----AGGREIWIEKYRPQTLDDVYGHEDIVERL #oth 11111111111111111111.11225564113212.1.1.....2212114.124112.. VNG2280 :::::::::::::::::::::TD::--::::G:RQ:::V:::::ER:E::V::P::T::: Hut2635 ::::::::::::::::::::::::ES:R:::::RQ:V::::::::::E:IA:::A::::: rrnAC2565 MHLRLSTLAGFKTGPRFQSS::::ESESR::::RE:V:::::::::::::M:::N::G:: Hmu2741 :::::::::::::::::::::::VER-::::S:RE:V::::::::::S::V:::T::::: NP0900A :::::::::::::::::::::::GD:D::::G:::::::::::::::::IV:::S:T::: hla0165 ::::::::::::::::::::::::DEQTAAT:T::::::::::::S:::IH:Q:A::::: HQ3671A ::::::::::::::::::::::::D:SDAA:PT:::::::::::A::ENI::Q::T:D:: HVO_0203 :::::::::::::::::::::::::ESGDA:PA:::::::::::::F:::::QD:::::: Hbo1330 :::::::::::::::::::::::::D:EEA::T:::::::::::::::::::Q::::::: consensus QSYIDRDDLPHLLFAGPAGVGK-------------------------------------- #oth 31.1311.11.1..2....1..11111111111111111111111111111111111111 VNG2280 :::V:::::::::::::::T:::::::::::::::::::::::::::::::::::::::: Hut2635 G::VS:N::S:M:::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2565 K::VS:N::S:M::S::::T:::::::::::::::::::::::::::::::::::::::: Hmu2741 :::V::N::S:M:::::::T:::::::::::::::::::::::::::::::::::::::: NP0900A KQ::AQN::::::::::::::::::::::::::::::::::::::::::::::::::::: hla0165 ::::EQ::I:::::G::::T:::::::::::::::::::::::::::::::::::::::: HQ3671A ::::::::::::::::::::::CVTGSTPILTNKGIRQIGEIVGDVDGFAPAPQNLKVCS HVO_0203 R:::E::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo1330 R:::EQ:::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 VNG2280 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut2635 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2565 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu2741 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP0900A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla0165 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ3671A LTADGSFQYRHPSHVFGKRASGLQRIKTNDGATLTVTPEHKLLIRTGENTNPTWVPAADI HVO_0203 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo1330 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 VNG2280 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut2635 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2565 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu2741 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP0900A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla0165 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ3671A TAGMHVLRAKNLPIPAETTGSCAASKNASEVSHIGDEYRYHDSLMADVNTRIATLERLIE HVO_0203 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo1330 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 VNG2280 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut2635 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2565 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu2741 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP0900A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla0165 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ3671A DYAESRSDGSLKFTLIGAHTPTVSTVSYLLATVGIASRHTSTLIDSEKRVHAIIIDASDT HVO_0203 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo1330 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 VNG2280 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut2635 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2565 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu2741 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP0900A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla0165 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ3671A VRLEEMIETDWDTVMADQTTTVTSSSTASTTKTTQSYLSSGETQTCGWIPYADGGVTHPS HVO_0203 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo1330 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ---------------------------------------------TTAATAIARELYGDD #oth 111111111111111111111111111111111111111111111.12111..222..1. VNG2280 ::::::::::::::::::::::::::::::::::::::::::::::ASSVS::K:::::: Hut2635 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::E: rrnAC2565 :::::::::::::::::::::::::::::::::::::::::::::::C:::::::::::: Hmu2741 :::::::::::::::::::::::::::::::::::::::::::::::S:::::::::::: NP0900A :::::::::::::::::::::::::::::::::::::::::::::::::::::K:V:::: hla0165 ::::::::::::::::::::::::::::::::::::::::::::::::::::::QV:::: HQ3671A TQHSPLHADVVTVSESLDAEKRVYDLTVPGVRNYVGGCIPTVMHN::::::::HAV:::: HVO_0203 :::::::::::::::::::::::::::::::::::::::::::::::S::::::AI:::: Hbo1330 :::::::::::::::::::::::::::::::::::::::::::::::S::::::AI:::: consensus -WRENFLELNASDERGIDVVRDRIKNFARSSFGGYDYRIIFLDEADALTSDAQSALRRTM #oth 1.2311.......1.........1.3...2....422.11......1..31..1...... VNG2280 ::QD:::::::::::::::::::::D::::::::HN::V::::::::::D:::::::::: Hut2635 ::E::::::::::::::::::::V:S:::T:::::::::::::::::::A:::::::::: rrnAC2565 ::::H::::::::::::::::::::::::T::::VE:::::::::::::::::::::::: Hmu2741 ::Q:H::::::::::::::::::::S:::T::::V::::::::::::::::::::::::: NP0900A :::::::::::::Q:::::::::::S:::A::::::H::::::::::::::::::::::: hla0165 N::G:::::::::Q:::::::::::G::::::::-:F::V::::::S::DE::A:::::: HQ3671A ::QN:L::::::::::::::::::::::::::::::H:::::::::S::D:::::::::: HVO_0203 :::G::::::::::::::::::::::::::::::H:::V:::::::S::N:::::::::: Hbo1330 :::G::::::::::::::::::::::::::::::F:::::::::::S::::::::::::: consensus EQFSDNTRFILSCNYSSKIIDPIQSRCAVFRFSPLGDDAVAAQIRDIAAAEGIELTEDGL #oth ...11.1...1......1..............11.213.1322315..32.4112.11.2 VNG2280 ::::N:::::::::::::::::::::::::::AQ::::::::HL:E::ET::L:H:D::I Hut2635 ::::N:V::::::::::Q:::::::::::::::::A:E::E::::Q::QE:V:DV::::I rrnAC2565 ::::N:V::::::::::Q:::::::::::::::::A:::::EE::T:::E:D:::::::: Hmu2741 ::::N:V:::M::::::Q:::::::::::::::::::E::E:E::H::DE::::::D::V NP0900A :::::::::::::::::Q:::::::::::::::::::A::DE:::I::DT::::::D::V hla0165 :::::::::::::::::::::::::::::::::::S:A:::::T:E::::::::V:DE:V HQ3671A :::A:::::::::::::::::::::::::::::::SET:IRG:TK::::::N:::::::: HVO_0203 :::::::::::::::::::::::::::::::::::::::I:E:V:::::::D::V::::: Hbo1330 ::::::::::::::::::::::::::::::::::::::::RE:VK:::ET:E:::::::: consensus DALVYAAGGDMRRAINGLQAAATTGDTVDEEAVYAITSTARPEDIEEMVTAAIDGDFTAA #oth 1....1.1....1...2....132.23.1.11.14..1.....2.23..35.22.1.221 VNG2280 :::::::D::::::::A::::SA:::S:N::T:::::A:::::E::T:::E:LG:::A:: Hut2635 E::::V::::::K::::::::SMS::::N::::FE::::::::::R:::DL:L::::::: rrnAC2565 :::::::D::::K::::::::SVS::::::S::::::::::::E:RT::QS:L::::::S Hmu2741 ::::::::::::K::::::::SVS::V::::::F:::::::::V:QG::QD::::::::: NP0900A :::::::D::::K:::::::::VM:G::::::::T::::::::E:R::::E:M::::::: hla0165 :::::::D::::::::S::::::::EI::::::::::A:::::E::S:::N:LH::::R: HQ3671A ::::::::::::::::S::::::::EV::::T::T:::::::::::T:::::::::::T: HVO_0203 ::::::::::::::::S::::::::EV:::::::M::::::::::::::R:::::E:::: Hbo1330 ::::::::::::::::S::::::::EI:::::::L::::::::::::::QS::::E:LT: consensus RSQLDTLLTDTGIAGGDIIDQLHRSVWEFDLDERAAVRLLERIGEADYRITEGANEQVQL #oth .23.22.1123.2....1...1..12.21.231341.2211.2..1....23..1.12.. VNG2280 :AT::D:::NR:L::::::::V::::::::VE:A::::::D:L:::::::A:::::R::: Hut2635 ::R::::::EE:::::::::::::T::::::SDA::::V:D:V:::::::::::S:RI:: rrnAC2565 :AT::R:::EE::::::::::::::I::::I:DD::::V::::::T:::::R::::R::: Hmu2741 :::::D:I::E::::::::::::::I::::VPDEQ:::I:D:V::T::::::::::RI:: NP0900A ::::E:::::V::::::::::::::::::::E::E::Q:M:::::::::::A::S::L:: hla0165 :AT::::::E::M::::V:::::::::::::S::E::A:M::::::::::A::::::::: HQ3671A ::::Q:::V:::M:::::::::::TA:NL::::ETT::::::V::::::::V:::::::: HVO_0203 :K::E::IV:::M:::::::::::::::::::::D::::M::::::::::S::::::::: Hbo1330 ::K:E:::V:::M::::::::::::::D::::::TT:::M:::::::::::::::::::: consensus EALLASLALAQ-- #oth .11..11145642 VNG2280 ::::::V::NAE: Hut2635 :::::::::DGRD rrnAC2565 ::M:::::QGE:: Hmu2741 ::M::::S:DD:: NP0900A :::::A::RGNET hla0165 :S:::::S::E:: HQ3671A ::::::::DT::: HVO_0203 :::::::::S:N: Hbo1330 ::::::::A:TDD