| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 3368 | VNG2062 | Hut2935 | NP2252A | rrnAC2818 | Hmu3127 | hla1293 | HVO_1907 | Hbo1786 | HQ3104A |
| 2034 | VNG2062 | 2778 | 1907 | 1972 | 1941 | 1892 | 1817 | 1844 | 1774 | 1784 |
| 2643 | Hut2935 | 1907 | 3413 | 2524 | 2600 | 2649 | 2282 | 2372 | 2306 | 2286 |
| 2861 | NP2252A | 1972 | 2524 | 3340 | 2704 | 2714 | 2401 | 2533 | 2520 | 2423 |
| 2811 | rrnAC2818 | 1941 | 2600 | 2704 | 3707 | 2810 | 2288 | 2419 | 2426 | 2358 |
| 2785 | Hmu3127 | 1892 | 2649 | 2714 | 2810 | 3464 | 2367 | 2415 | 2416 | 2382 |
| 2658 | hla1293 | 1817 | 2282 | 2401 | 2288 | 2367 | 3736 | 2577 | 2648 | 2603 |
| 2851 | HVO_1907 | 1844 | 2372 | 2533 | 2419 | 2415 | 2577 | 3575 | 2956 | 2945 |
| 2885 | Hbo1786 | 1774 | 2306 | 2520 | 2426 | 2416 | 2648 | 2956 | 3461 | 2985 |
| 2808 | HQ3104A | 1784 | 2286 | 2423 | 2358 | 2382 | 2603 | 2945 | 2985 | 3723 |
560 symbols consensus ---------------------------------------------MSDPALDVVEFLLTA #oth 111111111111111111122222222222222222122222222114222222112112 VNG2062 :::::::::::::::::::::::::::::::::::::::::::::--------------- Hut2935 :::::::::::::::::::::::::::::::::::::::::::::::E:ER:::::V::T NP2252A :::::::::::::::::::::::::::::::::::::::::::::::S:E:::::::::: rrnAC2818 MRLRYTASNVLPVAMFETHRGGILPWCRPSGLRVTYTGCVVTSVG::N:E:::::::::: Hmu3127 :::::::::::::::::::::::::::::::::::::::::::::::::E::I::::::T hla1293 :::::::::::::::::::MSAPFAATVRARGSTRLTASRGYFAR:::::::::::V::T HVO_1907 :::::::::::::::::::::::::::::::::::::::::::::::ER::E:::::::: Hbo1786 :::::::::::::::::::::::::::::::::::::::::::::::::::E:::::::: HQ3104A ::::::::::::::::::::::::::::::::::::::::::::::::R::EII:::::: consensus HLYTENRDLDENDLPPRYRRVFWTD----------------------------------- #oth 531224232223111342152114344214221232211111111111111111111111 VNG2062 -------------------------::::::::::::::::::::::::::::::::::: Hut2935 DV:S:RE::EPD:::SI::T:::EN::::::::::::::::::::::::::::::::::: NP2252A AI::D::::::R:::::::::::E:::::::::::::::::::::::::::::::::::: rrnAC2818 TI:S:R:::EPD:::AS::S:::S:::::::::::::::::::::::::::::::::::: Hmu3127 KI:::Q:::EPD:::SG::AA::::::::::::::::::::::::::::::::::::::: hla1293 :::::::::::::::::F:Q:::S:DAADDA::::::::::::::::::::::::::::P HVO_1907 ::::DD:T:::::::::::::::A:AEDDGDEDDSSA::::::::::::::::::::::: Hbo1786 :::::::E:::::::::::::::::PPDDEDEDDETA::::::::::::::::::::::P HQ3104A :::::D::R:::::::::::::::ERSDDSDSDSNSDTGATAGSASEPSADAPDDATDMP consensus GGIERPLVVTNSTARKATGVERPWDAISDLMFTDRDDFSGRISLTDRDMAEEWFLERADA #oth 4321111441643244122223113221211..2222.11413211221.32.2521336 VNG2062 ------------------------------::::::A:A:S:T:V:D:::ID::VD::A: Hut2935 :T::::::P:VEATSE:AD::N:::TV:G::::SH::::EE:K::::::::::LQK:IEP NP2252A :EV::::TT:TN::AA::::D:::E:::G:::::::::::K:EF:::E:::S:::::VSV rrnAC2818 :E:::::S::::::SE::::::::A:::G:::::::::::S::M::::L::::::::V:: Hmu3127 :E:::::TP:S:A:TT:::I::::E:V:G:::::::E:::A::F:::E:::::YEK:T:: hla1293 ::V::::KA:SE:T:T:::::H::::V:::L::Q:TE:::E::::QPA::L::YRDH::D HVO_1907 A:::::::::E:V::::::::H:::::::::::Q:EE::::L:::QPE::L:::VK:::Y Hbo1786 I:::::::::DN::::::::::::E:::::L::Q:E:::::::::QP:::TD:Y:::::R HQ3104A V::::::::::TV::::::::H::::V:::L::QQE:::::::::QP:::I::YI::::H consensus DRLQTNPTLAAAFE--DRDDA-VDYEEAREQNRPIRADRVWIDSLLEEYF--DDEEDEEM #oth 24164.1131432211.4325322125..342.132..122..21.112.122111121. VNG2062 ::ISA::V::FV:G:::EFG-:::::T::DA:::VQ::PQ:::G::::::::-::D:::: Hut2935 :E:LE:::::SI:D:::EF:E::S::K::::V::A::::A::::::D:::::E:::E::: NP2252A EA:RD:::::H::G:::QV::E::::T::SK::::H::::::::::::M:::-::DE::: rrnAC2818 SD:ED::V::K::::::QVEG:A:::R::Q::::S::::AF::AK:::A:DT:::D:::: Hmu3127 E:::R::VM:::::::::V:G:::::S::Q::::A::::AL::A::D:A:D:EE::E:G: hla1293 E:IAA:::VV::L:AS:DL::P:TH::::DSV:::Q:::::::A:::::::::ED::G:: HVO_1907 :::V::::V:KSV:::::::VD:THAD::::T:::H::::::::::D::::::::D:A:: Hbo1786 :Q:E::::I:::V::::H::VD:SHT::::RT:S:Q::::::::::DQ:::::E:::A:: HQ3104A E:::::A:I:::V::::H::IDIT:A::::RT:::H:::::::::::Q::DD:ED::A:: consensus LDLVDVRAPEEIEMTLDDLVLTTDQEGEIHKIVKAIEHRDYLARIGLREIGKLLFVGPPG #oth ....31.1.1.22221311...5...3.14.22......1...6...1.1..1....... VNG2062 :::::::S:A:LTVS:::I:::D:::A:MS:VA::::::::::T:::N:V:::::::::: Hut2935 :::::I:::::VD:R:::::::E::::::N:L:::::::::::::::::::::::::::: NP2252A ::::EI:::::::T::::::::::::N::::::::::::::::E:::::::::::::::: rrnAC2818 :::::::::::V::::A:::::::::D::Q:::::::::::::::::::::::::::::: Hmu3127 ::::E::::::VD::M:Q::::P:::A::::::::::::::::Q:::::::::::::::: hla1293 ::::N::::::::T::A:::::G::::::Q:::::::::E:::S:::::::::::::::: HVO_1907 ::::Q::::::::::::::::::::::::::LM::::::E:::D::::::::I::::::: Hbo1786 ::::Q:::::::::::E:::::Q::::::::LM::::::E:::D::::::::I::::::: HQ3104A ::::Q:::::::::::N:::::G::::::K:LM::::::E:::N::::::::I::::::: consensus TGKTSVARALAHELDLPFVEVKLSMITSQYLGETAKNVEKTFEVAKRLSPCILFMDEFDF #oth ....111.1..12.11.1....1...............1.1....1........1....1 VNG2062 :::::T::G:::Q:::::::::::::::::::::::::::V::::::::::::::::::: Hut2935 :::::::::::::::::::::::::::::::::::::::::::::R:::::::::::::: NP2252A :::::::::::QD:::::::::::::::::::::::::D::::::::::::::::::::: rrnAC2818 ::::::::::::D:::::::::::::::::::::::::::V::::::::::::::::::: Hmu3127 :::::::::::QD::::::::::::::::::::::::::::::::::::::::::::::: hla1293 ::::T:S:::::::GI:L::::M:::::::::::::::::::::::::::::::I::::S HVO_1907 ::::T:S:::::::G:::::::::::::::::::::::::::::::::::::::I::::S Hbo1786 ::::T:S:::::::G:::::::::::::::::::::::::::::::::::::::I::::S HQ3104A ::::T:S:::::::G:::::::::::::::::::::::::::::::::::::::I::::S consensus VAKTRRSDEHAAIKRAVNTLLKSIDEISLIRDEVLLIGATNHPDQLDAAAWRRFDEIVNF #oth ..1..31...1.1............11..12.1.1.........1..1.........11. VNG2062 ::T::TG:::N::::::::::::::::::VT:D:::::::::::E::::::::::::LS: Hut2935 :::::A::::::::::::::::::::::::Q:D::::::::::::::::::::::::::: NP2252A :::::S::::::::::::::::::::::::Q:D::::::::::::::::::::::::::: rrnAC2818 :::::S::::::::::::::::::::::::Q::::::::::::::::::::::::::::: Hmu3127 :::::S::::::::::::::::::::V:::Q:D::::::::::::::::::::::::::: hla1293 ::::::::::::L:::::::::::::V::V:::::::::::::::::::::::::::::: HVO_1907 ::::::::::::L::::::::::::D::::::::I::::::::::::S:::::::::::: Hbo1786 ::::::::::::L::::::::::::D::::::::I::::::::::::S:::::::::::: HQ3104A ::::::::::::L::::::::::::D::::::::I::::::::::::::::::::::::: consensus PKPDRGMRADILRIVTRRMDIADFDPEALADRTEGLTGSDLRLVLREAVLEALTEERTTL #oth .1..33..1..1321.431212111.532.35.3........1.......3..1.1.121 VNG2062 :R::E::::::ISL::SEV:::::::A:::AE:S::::::::::::::::D::V:D::E: Hut2935 ::::K:::S:::QV:::D:E:D:Y::GE::GM::::::::::::::::::N::::::::: NP2252A :::::D::::::::::::::VD::::::::EA::::::::::::::::::D::::::::: rrnAC2818 ::::S:::::::::::QQ:E:D:::::T:::L::::::::::::::::::N::::::::: Hmu3127 :::::D::S::::V::QE::::::E:DE::EL:::::::::::::::::::::::::::: hla1293 :::::D:::::::V:::E:Q:::::::EV::::T::::::::M:::::::G::::D:M:I HVO_1907 :::::::::::::VI:N::::DE:::S:I::V:::::::::::::::::::::::::ME: Hbo1786 :R:::Q::::::::I:N::EV:::::::V:::::::::::::M:::::::::::::::A: HQ3104A :::::N::::::K:I:D::::TE:::VSI:E::D::::::::M::::::::::::::::: consensus TQDDLLDAVEDFEERDNLKNMDMIDGDGDALVAG-G--S-------------DDGHDHDH #oth ..4.253.143..1..1.1.111222243323234244232222222111113322..21 VNG2062 :::::MA:ISE::D::H:R:L:TLEDAL:-----:-::-::::::::::::::THS::T: Hut2935 ::E::VN::AN:::::::::L:::E::H::::::::TP:A:::::::::::::G:::::Q NP2252A ::::::E:I:G:::::::::::::E::A:::I:D:-::-G::::::::::::S::::::: rrnAC2818 ::Q::E::II:::::::::::::M:::A::::::S:GF:G:::::::::::::G:S:::: Hmu3127 ::Q::R:::T:::::::::::::::::H::::::::DI:GADSDENAESATP:G:::::: hla1293 ::Q:VME:::::::::::::::::::E:AEVLGETD::-:::::::::::::P::Q::T: HVO_1907 ::::::E::A::::::::::L::M-S:SSE::::A:SG::::::::::::::::::::S: Hbo1786 ::T:I::::::::::::::::::M-S::EQ:I::D:::-:::::::::::::G::::::: HQ3104A ::R:IIN::::::::::::::N:M-S:::Q::::D:SGKTDTAETDH::::::HD::::: consensus DHDH---------------- #oth 21441122222222223343 VNG2062 :DHP:::::::::::APNPE Hut2935 G::::::::::::::SHSDD NP2252A :::::::::::::::::::: rrnAC2818 ::--:::::::::::::::: Hmu3127 :::::::::::::::::::: hla1293 :DEG:DDTAHDHGAHSHSHD HVO_1907 ::::TDEHEGETQKDAGAAQ Hbo1786 N::D:::::::::::::::: HQ3104A ::N:::::::::::::::::