| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 3780 | VNG1097 | NP4440A | hla0247 | Hut0737 | rrnAC1292 | Hmu1687 | HQ1654A | HVO_1125 | Hbo0434 |
| 2745 | VNG1097 | 3787 | 2399 | 2162 | 2362 | 2524 | 2426 | 2361 | 2337 | 2361 |
| 2848 | NP4440A | 2399 | 3792 | 2332 | 2425 | 2580 | 2537 | 2396 | 2512 | 2588 |
| 2757 | hla0247 | 2162 | 2332 | 3800 | 2351 | 2334 | 2378 | 2357 | 2579 | 2556 |
| 2970 | Hut0737 | 2362 | 2425 | 2351 | 3815 | 2907 | 2880 | 2338 | 2501 | 2611 |
| 3014 | rrnAC1292 | 2524 | 2580 | 2334 | 2907 | 3804 | 2924 | 2375 | 2596 | 2688 |
| 3088 | Hmu1687 | 2426 | 2537 | 2378 | 2880 | 2924 | 3775 | 2441 | 2608 | 2700 |
| 2825 | HQ1654A | 2361 | 2396 | 2357 | 2338 | 2375 | 2441 | 3792 | 2654 | 2737 |
| 3051 | HVO_1125 | 2337 | 2512 | 2579 | 2501 | 2596 | 2608 | 2654 | 3799 | 3000 |
| 3120 | Hbo0434 | 2361 | 2588 | 2556 | 2611 | 2688 | 2700 | 2737 | 3000 | 3819 |
511 symbols consensus MTLRVTNTLTGEREEFEPRDPDNVLLYYCGLTVSDDAHLGHARLWVHADVMHRWLDHLGY #oth .113.11.121.212.1241224.11.2....1..31......2.212.222...334.. VNG1097 ::QY:S::RS::Q:A:::D::E:::V:T::::::::::::::::::QS:::T:::S:A:: NP4440A :::::S:::S::::::::A::::::::::::::::Y:::::::T:::V::I::::EA::: hla0247 :S:V::D::AD::V::TADG--D:T::V::::::::P::::::::F::::L::::::V:: Hut0737 :::::::::S::::A:::Q:::A:T:::::::T::PP::::::G:::V:::::::SW::: rrnAC1292 ::::::::::::K:P:::::::S:::::::::T::PP::::::G:::V:::A::::Y::: Hmu1687 ::::::::::::::A:::::::S:::::::::T::P:::::::G:::V:::::::A:::: HQ1654A :::S:::::::::::::::G-:E::::V:::::::H:::::::::::::I:::::EYQ:: HVO_1125 :::S:::::::::::::SHG-:E::::V:::::::H:::::::::M:::L::::::YE:: Hbo0434 :::S::::::::::::::Q:D:D::::V:::::::::::::::::M:::::::::E:E:: consensus DVRHVENFTDVNEKIVARVGE----D-LGDSEADVARHFTQSVIDDMRGLNLKRAEVYPR #oth 2.1..1.3.......2..1.21111343142.33..4112443231..2...4..2.... VNG1097 G::::Q:V::::::::::::A:::::G:::T::A::A:Y:::::::::A:::A::D:::: NP4440A :::::::I:::::::::::::PADG:TF::D:G:::T::IDQLLS:::S::::::::::: hla0247 :::::::V:::::::T::I::::::RDAWTD:R:::ET::ATTF:A::::::L::::::: Hut0737 ::H::::::::::::::::::::::V:-:G:::::::TYI:D::R:::S::::::::::: rrnAC1292 ::H::::L:::::::::::::::::::-::::::::::YV:QA:::::S:::G::::::: Hmu1687 :::::::::::::::::::::::::N:-:E::::::::YV::::::::A:::R::::::: HQ1654A T:::::::::::::::::I:::::::E::ET::T::D:::N:::Q::::::::::T:::: HVO_1125 :::::::::::::::A::I:::::::D:::D::G::E::VGD::R::::::::::::::: Hbo0434 T:H::::::::::::A::I:D:::::E::Q::P:::::::DH::R::::::::::::::: consensus VSEHVPEIIDLVETLIERGYAYEANGSVYFDVTAFEDYGKLSNQQLDELEAQGPPDERAE #oth .1..1.2.111123.315.1...21.......24.12..3..1.522231212442.22. VNG1097 :::::::::::IGD:VDA::::::G:::::::RR::E::A::G::V:::DP:::DA:Q:: NP4440A :::::::::::I:::V:::::::S:::::::::E::E:::::::R:EAV:::::ET:Q:: hla0247 :T::::::V::::::::K:::::S:::::::::::D::::::::NVQD:::::E::::S: Hut0737 ::::::::::::::::D::::::::::::::::::::::E::::TVE::D:::D::::G: rrnAC1292 :::::::::::::R:::Q:H:::Q:::::::::S::::::::::SV:DI:S::ADT:-G: Hmu1687 ::::::::VAM::::::K:::::::::::::::T::E:::::::::::I::::D:::QS: HQ1654A ::::I:T::::::S:LDD:::::::::::::::::DG::D::::::::M:::T:A::::: HVO_1125 ::::I:::::::Q::VD::H:::S::::::::ST:D::::::::K:E:::SRATK:::S: Hbo0434 ::::::Q::::I:::T:N:::::S::::::::::::::::::::KIE:M::::EA::::: consensus KRHPADFALWKAGGVDPAAAAEHRDEDLA-PLEAAC--GQTWDSPWGEGRPGWHIECSAM #oth ..1.3.......11.2142343.244235135253431111.31..11......1..... VNG1097 :::::::::::::::S:DD:NT:::DE:P:::DGER::::::A::::::::::::::::: NP4440A :::::::::::::::SES:LE::::A:CEYAT:SPA::::::A::::::::::::::::: hla0247 ::N:S:::::::D::SET::R::AKH:HG:-D:TPS:::EI:N:::S:::::::V::::: Hut0737 ::::Q:::::::::::::DIGA::HA:A:::A:D::RTA::::::::Q:::::::::::: rrnAC1292 ::::::::::::::::::DI:::QHPEA:::A:E::QTA:I::::::::::::::::::: Hmu1687 ::N::::::::::::::::IED:QH:GAS::P::::ETA:::::::S::::::::::::: HQ1654A :::::::::::::::K:DDLN:::S:E:D:Q::TTH::::::NA:::::::::::::::: HVO_1125 ::N:T::::::::A:::KT::::::P::E:::H:P::::E::E::::::::::::::::: Hbo0434 :::::::::::::A:S:D:V::::P:E:D::I:D:::::E::E::::::::::::::::: consensus SMTHLGDTIDIHVGGRDLVFPHHENEIAQSEAATGQQFARYWLHVGLLQTEGEKMSSSLG #oth 111..1121...1..1..1.......1......1132..21...12.122421.....1. VNG1097 A::::D:H:::::::Q:::::::::::::::::S:ER::DH::::R::E:D::::::::: NP4440A :::::D:S::::M::::::::::::::::::::::E::::::::AD:F:MDD:::::::: hla0247 :T::::::L:::M::::::::::::::::::::::ET:::H:::::::AM::::::::I: Hut0737 ::::::E::::::::Q::::::::::V::::::::DR::N::::::::E:GE:::::::: rrnAC1292 :::::DES:::::::Q::::::::::V::::::::K:::N:::::R::E::E:::::::: Hmu1687 :T::::E::::::::Q::::::::::::::::::::::::H::::R::E:K::::::::: HQ1654A ::D::DE:L:::::::::M:::::::V:::::::D::::::::::::::SA:D:::::I: HVO_1125 ::::::::L:::::::::::::::::::::::::::::::::::::::::::D::::::: Hbo0434 ::::::::::::::::::::::::::V:::::::::T::::::::::::M:DD::::::: consensus NFFTVSDALDEFGVNVIRTFLLSTAYRSEQTYSEETIAEAEERWERLERAYERAVEACDS #oth .242154.2214.4212.1122212.433122232233..42.111.412113.23.511 VNG1097 ::::::N:VA:R:P::V:ML:V::S:TQR:::::A:VS::TQ:::::Q::H:::AD:I:: NP4440A ::IP::E:VAR::::PL:M:F::AS:N:T:::::AA:E::L:::D::AA:::::AA:A:: hla0247 ::W::P:::::L::::::::YAGA::::::ALT::::::::::::::S:T:D:::::L:: Hut0737 ::A::E::IA:Y:LG:V:::::::::H:RAA:T:::LS::TK:F:T:::G:::::::A:: rrnAC1292 :Y:::A::VE:::PD:L:::::::::T:RA:::D::::::K:::D::S:G:::::::::D Hmu1687 :::A:EA:V::Y:TD:V:::::::::HNSAV:::A::D::I::::T:::G:::::R:::D HQ1654A :IL:IKQ::::H::::::M:Y:A::::::::LGQSEL:::T:::D::N::::M::D:SN: HVO_1125 :::::G:::::::AD:::::Y:::::G::::::A::::::::::::::::::A::D:V:: Hbo0434 ::::::::::::::D:::::Y:::G:GA:::F:DSAM:::::::D:::::::T:I::::: consensus VDAYAKVEDDALREAVETAREAFAAAMNDDFNTREALAALLELASAVNRHVDDADE---- #oth 22.41333145.1421332355255.112.1.2.1.422.4312511.3.1235251111 VNG1097 :A:H::PA:::::T::AD::GE:::::RA:::::A:VS::::::::::::::GT:T:::: NP4440A PA:GT::-:SP:G::::A:EA::TE::::::::::::S::FD::::I:S:L::R:R:::: hla0247 TE:R::A::EE::G::::::DDL:T:::::L:L:::T::::D:TD::::::::VEDGDTE Hut0737 :::T::TT::::::::::V:::IPR:::::::::::::::V:FT::::::::EVEP:::: rrnAC1292 :::HT::T:ET::D:::D::S::E::L:::::::::MT:::D:TA:::T:::GH:::::: Hmu1687 :::::T::::T::T::T::::H:ET:::::::::::::::T::VG:::V:::EQSS:::: HQ1654A T::::I:::ES::SS:SETKSS:TS:::N:::V:::I:S::K::TS::::L:SQER:::: HVO_1125 P::RT:::ATD::DT:TET::N:RE:::::::V:::M:E::G::G::::::A:::::::: Hbo0434 P::::S:::AD::::I::TQTD:QK:::::::V:::M:::I:::R:::T::N:::::::: consensus --YDYRGLRRAVEAFEELGGDVLGLSFGD-GSDDGDVSLAEDLVELVLDVREAEREAGNY #oth 111..11.231112215111212.151212444413142.21113.2.3..22..3.1.. VNG1097 :::::Q::HD::D:::T::::::::Q:D:::AGEDA::::D:VID:::::::Q::T:::: NP4440A ::::::A:::GI::::R:::::::FD:D-:::A::EAA::GE::::L:E::::::::E:: hla0247 SA:::::::E::::::N:A::::::Q:E-:STT::::D::GE::D::::::::::::::: Hut0737 :::::::::::IDVYD:FAVG::::PL::G:::T:::R:::::::::::::AQ::D:::: rrnAC1292 :::::Q:::::::T:::F::GI:::A::-:DD:S::::::G:V:D:::T::QQ::::::: Hmu1687 ::F:::A::E:::TI:::::G:::::::-:::EG::::V:::::::L::::::::A:::: HQ1654A ::::::::YM:I::::A:::E:C::K:::QPTG::T:EI::E:I::I:::::T::::::: HVO_1125 ::::::A:::::::::D:::E:F:::::::AGEG::::V:::::Q::::::::::::::: Hbo0434 :::::::::E:I:T::D:::::F:::::::AA:G:::EI:::::S:L:N::::::::::: consensus ERADELRDELEALGVEVQDTDDGATYRLE-- #oth 1...21..42422.1212.3311232.3411 VNG1097 ::::D:::R::::::S:E:::::::V:R-:: NP4440A ::::KI::DI::::::I:::::::E:::-:: hla0247 ::::::::A:REV:::IE:GP::::::F::: Hut0737 ::::::::::A::::::::S:::P::::P:: rrnAC1292 :::::::::::::::::::::::P::::-:: Hmu1687 :::::::::V:S:::::::::::P::::G:: HQ1654A D:::::::S:DEI:I::::NNEETI::VNNQ HVO_1125 ::::D:::D:T::::D:E:GP::::F:F::: Hbo0434 ::::::::::D::::::H:SE::PSF:F:::