|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 3017 | hla0669 | VNG2437 | Hut2207 | rrnAC2683 | Hmu3092 | NP5252A | HQ3711A | HVO_0049 | Hbo1444 |
2343 | hla0669 | 3120 | 2159 | 2122 | 2222 | 2178 | 2199 | 2099 | 2173 | 2196 |
2376 | VNG2437 | 2159 | 2997 | 2068 | 2138 | 2095 | 2173 | 2164 | 2213 | 2242 |
2515 | Hut2207 | 2122 | 2068 | 3043 | 2542 | 2575 | 2226 | 2023 | 2184 | 2199 |
2601 | rrnAC2683 | 2222 | 2138 | 2542 | 3166 | 2802 | 2254 | 2096 | 2279 | 2202 |
2578 | Hmu3092 | 2178 | 2095 | 2575 | 2802 | 3172 | 2237 | 2053 | 2239 | 2198 |
2476 | NP5252A | 2199 | 2173 | 2226 | 2254 | 2237 | 3016 | 2184 | 2281 | 2307 |
2387 | HQ3711A | 2099 | 2164 | 2023 | 2096 | 2053 | 2184 | 3016 | 2235 | 2397 |
2553 | HVO_0049 | 2173 | 2213 | 2184 | 2279 | 2239 | 2281 | 2235 | 3077 | 2434 |
2540 | Hbo1444 | 2196 | 2242 | 2199 | 2202 | 2198 | 2307 | 2397 | 2434 | 3115 |
425 symbols consensus ------MGTVALAFSGGLDTTVCVPLLKEEYGYDEVIGVTVDVGQPDYEFEEAEETAEAL #oth 113454343...............11.2......1.1..1......34..31.41..2.1 hla0669 :::::::A:::::::::::::::::::::::::::::::N::::::TE::D::::::D:: VNG2437 ::::MPS:::::::::::::::::::::::::::D::::::::::::A::AA:R:::A:: Hut2207 MTQQDGN:::::::::::::::::::::::::::D:::::::::::::::D::::::::: rrnAC2683 ::MPEGN:::::::::::::::::S::::::::::::::::::::::::::::::::::: Hmu3092 MTPETAS:::::::::::::::::S:::::::::::V::::::::::::::::::::::: NP5252A :::MSDKNR::::::::::::::::::E::::::::::::::::::EA::K::::::::: HQ3711A :::::::TR:::::::::::::::S:::::::::::::::::::::AT:::::QA::D:H HVO_0049 :::::::KK::::::::::::::::I:E::::::::V:::::::::EE:::::Y:::::: Hbo1444 :::::::TS:::::::::::::::S::Q::::::::V:::::::::ES:::::K:::D:H consensus GLEHHVVDAKEEFADLCFDAVRANADYQGYPLGTALARPVIAEAILEVAEEEGCDALAHG #oth 12131....242.13..331.31..2.............1..22.231.3312.212... hla0669 ::DL:::::::::::::Y:::KT::T::::::::::::::::::::G::::Q::::I::: VNG2437 :V:::::::TA:::A::::::::::T::::::::::::::::D:::S:::A:::A::::: Hut2207 ::D:Y::::R:A:::::LQ::E:::::::::::::::::::::G:AD::R:Q::S::::: rrnAC2683 :V:Q:::::T:::::::ME::K::::::::::::::::::::K:::S:::D:::S:V::: Hmu3092 :V:QY::::::D:::::LK::K::::::::::::::::::::K:::::::Q:::S:V::: NP5252A D:::::::::P:::E::::::::::S:::::::::::::::::::::::K::::SGV::: HQ3711A :IDL:::::TA::V:::::S:::::T:::::::::::::I:::S:VS::KA:N::::::: HVO_0049 ::::Y:::::Q:::Q::L:S:C::::::::::::::::::::K::::L:::QD::GI::: Hbo1444 ::DI::::::D:::E::::S:::::T:::::::::::::::::::::::Q:::::::::: consensus CTGKGNDQLRFEAVWRDSDLDVIAPVRELGLTREWENEYAAEKGLPVEGGNGGVWSIDTN #oth 1...........1...31122.1..1..111..11.32..3.22..111.22.31...1. hla0669 ::::::::::::::::G:::E:::::::::::::::ID:::::D::::A:D:::::::E: VNG2437 ::::::::::::::::A::H::C:::::::::::::I:::::RD::::A::E:E:::::: Hut2207 :::::::::::::::::T:M:::::I::::::::::::::E:::::::::A::RY::::: rrnAC2683 ::::::::::::S:::::::::::::::::::::::::::::::::::::D::RY::::: Hmu3092 ::::::::::::S:::::E:::::::::::::::::::::Q:::::::::D::RY::::: NP5252A S:::::::::::::::::::E::::::::::::TF:Q:::E:R:::I:::DE:KY::::: HQ3711A ::::::::::::::::N:::T::::I:::E::::::Q:::::HN:::QA::D:::::::: HVO_0049 ::::::::::::::::A:::E:::::::M:M:::::I::::::D:::Q:::E:::::::: Hbo1444 ::::::::::::::::A:::::::::::M:::::::KQ::D::N:::QA::D:::::::: consensus LWSRSIEGGELEDPGYIPPEDIYEWTDNPSG--ETELVEITFEDGYPVAVDGEELEPVEL #oth 1...11..14..2.424.32.1.3..34.442111331213..4.31.12113332312. hla0669 I:::AV:::K::::S:E:::::::::AG:E:::::-TI:V:::E:V:::I:::AMD::P: VNG2437 :::::V:::H::E:D:Q::A:::A:::A:::::::GT:D::::A:V::::::TAM:::A: Hut2207 ::::::::S:::::AT::ED:::L::E::::K::A::::::::::TA::::::::GS::: rrnAC2683 ::::::::S:::::ST::AD:::K::::::DK:DA::::VE::::V:::::::::GG::: Hmu3092 ::::::::S:::::ST::ED:::K::E::::K::A::::::::Q:EA:::::DD:GK::: NP5252A ::::::::S:::E:::V:::::::::TA:TA::::LE::VG:::::::SL:::K:::::: HQ3711A :::::::::K::::N:T::::V::::AD:ATTT::::IT:G::S::::SINDNAHD:::: HVO_0049 :::::::::N::::::V::::::::::Q::D::::::I::A::::::::::D::F::L:: Hbo1444 :::::V:::D::K::HV:S:::::::EQ:GS:::::CI:::::E:::::L::::M::::: consensus IETLNERAGAHGVGRTDMMEDRMLGLKVRENYEHPAATVLLNAHEALEGLVLTKEERDFK #oth 125..35..61.1....21...................1..2..21..1....23..3.1 hla0669 :QY::KY::GY:I::::V:::::::::::::::::::::::T::Q:::D:::::N::S:: VNG2437 ::A::D:::SY:::::::L:::::::::::::::::::T::A::K:::::::::A::::T Hut2207 ::E:::::::::I::::::::::::::::::::::::::::T:::::::::::A:::Q:: rrnAC2683 ::Q::KQ:::::I::::::::::::::::::::::::::::T:::::::::::Q:::Q:: Hmu3092 ::Q::SQ:::::I::::::::::::::::::::::::::::T:::::::::::Q:::A:: NP5252A :::::DL::DY::::::I::::::::::::::::::::::::::Q:::D::::::::A:: HQ3711A V:::::V::E::::::::::::::::::::::::::::T:::::K:::::::::D::::: HVO_0049 :SF:::K::K::::::::::::::::::::::::::::T::::::::::::::::::::: Hbo1444 ::::::L::QY:::::::::::::::::::::::::::T::::::S::::::::D::::: consensus AQVDQEWSQKAYEGLVDAPLMDALEGFIDETQERVTGTVTIKFEGGQARPVGRESEYAVY #oth 341232.11.1.1.1131.1241.211214.143.1..1.1221..32.212.1.32.1. hla0669 KGIE::::E:::Q:::F::VV:::DA:V::::DV::::A:V:VS::NC:V:A:D:::::: VNG2437 :A:S:Q:A::::::V:EH::::::N:YL::::SA:S:::::A::::R:::IA::::H::: Hut2207 TTI::R::E::::::I:::::KD:::::::::T:::::::V:L:::HT:A:S:::D:::: rrnAC2683 ::::::::::::Q:::::::TG:::A:::D:N::::::::V:L:::HC:::S:::D:::: Hmu3092 ::::::::::::::::::::VS:::A:V:D:N::::::::V:L:::HC:::S:::::::: NP5252A K:::H:::E:G:Q:::N:::V:::::::::::D::::::::R:::::::::::::P:::: HQ3711A RHI:S::A::G::::::H:::::::::::A::Q::::::::::::::::::::::AA:A: HVO_0049 :T::N::::::::::I::::VG::NA:LEK::::::::::::::::::::::::::::A: Hbo1444 TT::N::A::G:::::E::::A::D:::EQ::TK::::::::::::::::::::::::A: consensus SESAASFNTEDV-GGITQQDATGVAKYHGFQSRLANAALEDAKKE-----G--------- #oth .121...11121221.2.4....1.....2.4.1.1435355433333432334344343 hla0669 ::EM:::::::::A::A:E::::::::::L:E::::DVKAGVE:PELATD:SGAADEIDD VNG2437 :AD:::::::T::A::E:A:::::::::::::::::::FDGN:--:::::-::::::::: Hut2207 ::::::::E:::T:::::D::::::::::::::::KRVT:SLDE::::::-::::::::: rrnAC2683 ::::::::E:::S:::::::::::::::::::::::KI:D::::GAAVTD:SGDHAASED Hmu3092 :::::::DE:::T:::::::::::::::::::::::RI::::::GEAVAD:GSEATDSAN NP5252A :AE:::::::::T:::E:S::::::::::::E::::RVIDA:DE::::::-::::::::: HQ3711A :AD::::::SSI::E::::::::I:::::Y:G:I::::T:TDT:-:::::-::::::::: HVO_0049 ::::::::::T::D::E:A::::::::::::A::::QSAKKR:P:LAADG:SDE:::::: Hbo1444 ::::::::::T::D::::E::::::::::::T:I::::F:S:Q::APELATDGGVSNDGQ consensus ----- #oth 32211 hla0669 EN::: VNG2437 ::::: Hut2207 ::::: rrnAC2683 TEE:: Hmu3092 GESED NP5252A ::::: HQ3711A ::::: HVO_0049 ::::: Hbo1444 :::::