|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2027 | hla2324 | Hut0446 | rrnAC3512 | Hmu0982 | HQ1255A | HVO_0699 | Hbo0836 | VNG0549 | NP1618A |
1631 | hla2324 | 2008 | 1453 | 1535 | 1458 | 1476 | 1540 | 1509 | 1390 | 1428 |
1721 | Hut0446 | 1453 | 2012 | 1662 | 1646 | 1509 | 1527 | 1523 | 1506 | 1555 |
1779 | rrnAC3512 | 1535 | 1662 | 2016 | 1696 | 1538 | 1536 | 1595 | 1524 | 1532 |
1744 | Hmu0982 | 1458 | 1646 | 1696 | 2089 | 1517 | 1542 | 1584 | 1489 | 1536 |
1684 | HQ1255A | 1476 | 1509 | 1538 | 1517 | 2003 | 1603 | 1522 | 1420 | 1491 |
1714 | HVO_0699 | 1540 | 1527 | 1536 | 1542 | 1603 | 1993 | 1680 | 1472 | 1550 |
1690 | Hbo0836 | 1509 | 1523 | 1595 | 1584 | 1522 | 1680 | 2008 | 1449 | 1470 |
1630 | VNG0549 | 1390 | 1506 | 1524 | 1489 | 1420 | 1472 | 1449 | 2031 | 1555 |
1696 | NP1618A | 1428 | 1555 | 1532 | 1536 | 1491 | 1550 | 1470 | 1555 | 2011 |
278 symbols consensus MKYSGWPEPGELVVGKVDEIEDFGVFVDLEEYEDKRGLCHISEVASGWIKNVRDHVNEGQ #oth ..12...22..11..31.1.2........21.221...2.1...............1.1. hla2324 :::::::::::::::D::::A::::::::D::::::::::::::::::::::::::R::: Hut0446 ::F::::::::::::R:::::::::::::L::::::::A::::::::::::::::::::: rrnAC3512 ::::::::::::::::I::::::::::::D:::G:::::::::::::::::::::::::: Hmu0982 ::::::::S:::A:::I::::::::::::::::::::::::::::::::::::::::::: HQ1255A :::T:::::::P:::E::::A:::::::::::A:::::::::::::::::::::::R::: HVO_0699 :::::::D::::::::::D:A:::::::::::::::::::::::::::::::::::R::: Hbo0836 :::::::DS:::::::::::T:::::::::::::T:::::::::::::::::::::R::: VNG0549 :::E:::DE:::::::::D:::::::::::Q:Q:::::V:V:::::::::::::::::D: NP1618A :::::::T:::::::R:::::::::::::::::E::::V:V:::::::::::::::::D: consensus TVVAKVLDVDESAQQIDLSIKDVNDHQRKEKIQEWKNEQKADNWMELAFGEDLDDDRYAA #oth 1..2...2112212.11..1....1..11111.1...1....1.141.1...33.23144 hla2324 :::::::::::::N::::::::::E::::D:::D:::S:::::::LI:L:::V:::::T: Hut0446 ::::::::::KD:::::::::::::::::DT::::::::::::::TI::::::E:::::D rrnAC3512 :::::::::::::::::::::::::::::::::::::::::::::::::::::::ET::: Hmu0982 :::V:::EI::D::::N::::::::::::::::::::::::::::::::::::A:EQ::: HQ1255A :::::::::::::K::::::::::E:::::T:::::::::::::::I:::::I::E::T: HVO_0699 :::::::E:N::S:::::::::::E:::::::::::::::::K::A::::::IA::::QS Hbo0836 ::::::::::TGS:::::::::::E:::::::::::::::::K::S::::::VT::E:SE VNG0549 :::::::G:::::::::::L:::::::HSDT:::::::::::K:LT::::::MA::QFRR NP1618A M::C:::E:::::::V::::::::::::S::V::::::::::K:::::::::V::GTFRR consensus IANALLAEFGSLYDGFEQAAIHGTEALDDTDLDDDEIDAIVETARENVSVPYVNVTGYVD #oth 1.1211232211.22..2...1.621.2322132112211.31..4.......3....11 hla2324 V:::::V::D::::A::A:::S:E:::EEI:I:::AL::::TA::D:::::::D:::::: Hut0446 ::EE:I:G:::M:::::::::::::P:EE:::AE::V:::::A::::::::::::::::: rrnAC3512 :::E:::::::M:::::S:::::KD::E:V::SEE::::::Q:::N:::::::Q:::::: Hmu0982 V::E:::D:::::::::A::::::::::E:::SE:::::V:::::::::::::D:::::: HQ1255A V::::::::E:::TS:::::::::::::AVE::NE::A:::::::R:::::::T:::::: HVO_0699 :::::::::E:::::::::::::I::::GVE:::::LET::::::Q:::::::::::::: Hbo0836 ::::V:::YET::::::::::::VS::E:V:::E::VE:::D:::Q::::::::::::I: VNG0549 :::G:::D:::::::::::::::H:::A::A:E::::::::::::D:::::::T:::::S NP1618A :::E:IDAH::::A:::::::::P::::A:::::::L::::::::::::::::T:::::: consensus LECPAGDGVDDIKEALQAAEGNGE-----------VPDEIDLDVTYVGAPEYRIKVQAPD #oth 1421521..15124.12.1..13221111111111111112.2.1...1....23.3..1 hla2324 ::ST:PN::::V:A::E:::::::::::::::::::::GV::E:G:::S:::::::R::N Hut0446 :T::ES::::A::::M:::::::::::::::::::::E::E:::::::::::::E::::: rrnAC3512 :S::ES::::I:::::::::::::::::::::::::::::E:E:::::S:::::Q::::: Hmu0982 :T::GS:::EL::Q:::::::DADALPDGADADAD::E:VE:E:::::::::::::R::: HQ1255A ::::V:::::KVQS::::V::DSQT::::::::::IG:::::::::::::::::R:E::: HVO_0699 :RS::::::::V::::K::::D:::::::::::::IG:::E:S::::::::::V::K::: Hbo0836 IR::T:::::::::::K::::D-D:::::::::::::E::Q:E:::::::::::::R::: VNG0549 :QS:D:::::T::D:::::::::::::::::::::::::V:::::::::::::LR::::N NP1618A ::A:G::::E:VR::::::::::::::::::::::::E:V::::::::::::::R::::N consensus YKTAESALEASADRAREAIEAHGGTGEFHRERREDEE- #oth ..1..32..3122..54212441.1231..1.54.111 hla2324 :::::DQ:::A:A::::::::A::S:G:::D:H::D:: Hut0446 ::::::Q::::::::TA:::ER::SA:Y::::TT:::: rrnAC3512 :::::D:::E:::::AKVV:Q:::S:Q:::::S::D:: Hmu0982 ::R:::E:::::::::AVVVE:::::::::::N::::: HQ1255A :::::G::::A::::KT:VTD-:::V:Y:::::S:::: HVO_0699 :::::TE::S:VA::::::::A:::A:Y::::SG:::: Hbo0836 :::::T:::DA:A::K:V::SR::::::::::H::D:: VNG0549 ::::::::::AG:::VDSVT::D:S:A:::::QL:DDA NP1618A ::::::E:::::E::SD::::V:::A:::::::T::::