|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1598 | NP0338A | HQ3458A | VNG2366 | rrnAC2705 | Hmu3057 | Hut1794 | hla1024 | HVO_3008 | Hbo1504 |
727 | NP0338A | 1882 | 484 | 474 | 467 | 458 | 512 | 457 | 563 | 561 |
813 | HQ3458A | 484 | 1939 | 507 | 588 | 538 | 570 | 579 | 590 | 659 |
689 | VNG2366 | 474 | 507 | 1430 | 540 | 568 | 491 | 547 | 503 | 515 |
899 | rrnAC2705 | 467 | 588 | 540 | 1849 | 835 | 575 | 629 | 606 | 620 |
853 | Hmu3057 | 458 | 538 | 568 | 835 | 1894 | 559 | 597 | 549 | 574 |
906 | Hut1794 | 512 | 570 | 491 | 575 | 559 | 1684 | 684 | 693 | 580 |
866 | hla1024 | 457 | 579 | 547 | 629 | 597 | 684 | 1587 | 713 | 676 |
940 | HVO_3008 | 563 | 590 | 503 | 606 | 549 | 693 | 713 | 1492 | 696 |
883 | Hbo1504 | 561 | 659 | 515 | 620 | 574 | 580 | 676 | 696 | 1753 |
298 symbols consensus ------------MSD-FDKEAERERLREKYEQDEDKREATQRMSELLLQGATMTNAHCDE #oth 11111111121211.1..2.21.12...12343653.33121..1...1....114..44 NP0338A ::::::::::::::::::R:K:::K::::::::KQ::::SE::::::::::::::R::P: HQ3458A ::::::::::::::::::E::::::::::::KNA:R:AE::Q::::::K:::::::::ET VNG2366 :::::::::MSNTD:G:::::A::E:::::NA:QQD::E:A:::D::::::::::D:::R rrnAC2705 ::::::::::::::::::::::::K::::F::E::N:A::EQ::::::K:::::::::S: Hmu3057 ::::::::::::::::::::T:::K:::::GDA:SD::::EQ::D:::K:::::::::NN Hut1794 ::::::::::::::::::E:::::::::QF:::RK:::::EQ::::::::::::DT::ET hla1024 :::::::::::::::G::::::::K::::LAD:DE:::H::::::::::::::::R:::D HVO_3008 :::::::::::::::::::::::Q:::::::R::T::RS:::::::::K::::::K:::N Hbo1504 VGFSTHSAFVSC:::::::::::Q:::::::K:TER:QE::::::::::::::S:K::N: consensus CGDPIFRYDGQEFCPTCQ----------------ARGDAADGADQGA--------DAGDN #oth .12.2..12.22...1..111111111111345436465353553532222222245455 NP0338A :HS:V::HE:::::::::::::::::::::QVVTED::LV:P::A::GADTGADSE::S: HQ3458A ::S:::::E:::::::::::::::::::::SRNTE::A:DN:SV:AS:::::::::S:G: VNG2366 ::T:L::H::ET::::::::::::::::::::::-------------::::::::----- rrnAC2705 :::::::H:::::::::::::::::::::::KPV::DTQ:S:::PSDADEQEGQT:D::Q Hmu3057 ::::::::::::::::::::::::::::::::::--QPVDR:D:A:D:::::::::T::: Hut1794 ::::::::::::::::::::::::::::::::QA:GEN::::TNA:D::::::::G:D:T hla1024 :::::::H:::::::S::::::::::::::::AIGS::G:R:ES:ES::::::::AQTAA HVO_3008 ::::L:::E::V:::::::::::::::::::::::E:Q::AN:::D:::::::::EQAAE Hbo1504 ::T:::::Q:A:::::::DKQAKADAEQGEAANV:N:QGV::TT:A:::::::::ET:EQ consensus AEVADDAPEA-V-AADADASANESEADAPTPDAADAPDAASPADGAQ-SASGAAPAPTDT #oth 355564445454454465465446444465553455375634566842345558555352 NP0338A :SPDT::QTDTDAEPAPS:D:H:PS:SEAA:ERGRD:G:DA::EAEPEPDVDRR::T::E HQ3458A :ASNN:SQN:SANSSSNGQAN:Q:STE:H:QAD:T:APES:L::QTN:T::S:NVDRS:: VNG2366 ----------:-:--------HDDND:E::ATTQS:::RSP:::PQA:TPHSSP:TTP:: rrnAC2705 I::::PSD::R:QFG:G:------::A:SA::TT:DST:PPE:G:::::TRQSDHSEPAS Hmu3057 I::TTPSDD:T:QFG:::DQQPA:::GSQQ:PR:SEA:SRQ:TG:RP::SA::GQNQR:: Hut1794 :TAD:GT::TQSA::SQP:EPAANTT:T:DEQ:VES:ENV:TGK:G:PG:::QTAS:PSS hla1024 L:E:GN::RTV:KTG:S:E:PPQK:R::SESP:::QSAP::ASQNSA:TSNAVS:Q::TE HVO_3008 :A:EA:ES:::-:E:E:E:N:::TA:S:GSTE:::ETRRNPT-----:G:N:R:A:::R: Hbo1504 :DSESP:::H:-:::::SQ:G::TAEAVT::::TGVSKP:::QRTP:::D:EMQTDS:E: consensus RTAAERVDT----P-ERSDPREAAGDDPATAARES------------------------- #oth 445565655544445464524553255454432444334224333334323322322222 NP0338A :RP:RVDPPARSE:S:P:T:DAHESTGRRK:P:DRRPTGSGFDSTEAT:::::::::::: HQ3458A SPTV:P:E:AVQTNTSN:TQSQS:S::DR:STQTGVSRHGNNDTTAVADANSTAHTNTSE VNG2366 SSSTAAATDDVPTAAA:DR:EH:PTAE:T:P:T:E::::::::::::::::::::::::: rrnAC2705 Q::RTG:SSEPSGQTSNDQ::GTPSQN:PVS::QPTPSEGGTGDVAANLDAASAL::::: Hmu3057 A:VDG:H:ATGPA:E:SA:::S:PSV:::ATSTQPAGRSGGAADDPRSGAPDSVDEQLQN Hut1794 AQPGQ:::VPGLE:G:QRP:SHG:::--LQD::D:::::::::::::::::::::::::: hla1024 KSRDDPTT:::::-:---P:A:S::SETVAD::A:::::::::::::::::::::::::: HVO_3008 :::G::EA:::::-:::RA:::V:::--V::::::::::::::::::::::::::::::: Hbo1504 :R::TTSSS::::-:GV::ASS:S:AS-:QT::::::::::::::::::::::::::::: consensus ----------------LVETLARFARRAAATDDPRRARDHLEAAREAAEALDALRR-- #oth 2122111111111111.5522444223.433231131323.4.12...1114232521 NP0338A :::::::::::::::::ADEI:ALTQQ::E:S:IG:K::L:A:::::::T:QTI::L: HQ3458A QRPAENGPTRQAAIES:H:A:T:H:QL:::S::::::::::R:SN::::::EQ::-:: VNG2366 :::::::::::::::::ES:I:AL::::SDA::::T::EY::::H:::A:::T::P:: rrnAC2705 :::::::::::::::::A::VH:::E:::::EN::E::E::Q:::::::::::A:F:: Hmu3057 ARGL::::::::::::::Q:VEQY::::RDA:S::Q::EY:::::::::T:::T:Y:: Hut1794 ::::::::::::::::::A::SS:::Q:E::::::::Q:A::::H::::::A::ENVR hla1024 :::::::::::::::::TR:::::::A:EE:::::::::::Q:::::::::A::D-:: HVO_3008 ::::::::::::::::::R::TWA:EQ:ES:::::::TEY:T::::::::IS::D::: Hbo1504 :::::::::::::::::L:AITQHS:::TEI:E::::KQ:::::::::::::::D:::