[J] (RPS4A) COG1471 Ribosomal protein S4E 9 genomes BUD0274 9 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi VNG1703 rrnAC1600 HVO_2552 Hbo2301 Hmu2025 Hut3021 hla0845 NP4878A HQ2830A

Pairwise sequence scores
Consensus score	1770	VNG1703	hla0845	Hut3021	NP4878A	rrnAC1600	Hmu2025	HQ2830A	HVO_2552	Hbo2301
1332	VNG1703	1750	1235	1198	1179	1206	1209	1134	1223	1202
1368	hla0845	1235	1795	1228	1233	1250	1267	1234	1277	1283
1499	Hut3021	1198	1228	2145	1352	1373	1447	1234	1292	1278
1474	NP4878A	1179	1233	1352	1764	1347	1389	1170	1320	1283
1476	rrnAC1600	1206	1250	1373	1347	1747	1475	1213	1297	1289
1535	Hmu2025	1209	1267	1447	1389	1475	1979	1180	1328	1288
1345	HQ2830A	1134	1234	1234	1170	1213	1180	1984	1288	1371
1450	HVO_2552	1223	1277	1292	1320	1297	1328	1288	1843	1418
1434	Hbo2301	1202	1283	1278	1283	1289	1288	1371	1418	1763

307 symbols
consensus       MTNHQKRLSVPNSWPVERKTETFTVKAGAGPHGEAGVPLLIVLRDVLGYVDSKKEARYAL
#oth            .12.....11.1...1...1311.2..3......2....111.....1.1.221..11.1
VNG1703         :::::::::::K::::::::::::A:::::::::S::::VV::::::E:::DTS::Q::I
hla0845         ::R:::::A:::::::::::N::::::::::::::::::VVL::::::::::T:::::::
Hut3021         :S:::::::::::::I:::::::::::D::::::::::::::::::::::::R::::F::
NP4878A         ::::::::A::K:::::::E:AY:T::A::::::E:::::::::::::::::::::::::
rrnAC1600       :S::::::::::::::::::A:::::::::::::S::::::::::::::A:NR:::::::
Hmu2025         :S:::::::::K:::::::::::::::D::::::::::::::::::::::::R:::::::
HQ2830A         ::Q::::::A:::::I::::::::::::::::::S::::V:L:::::::A::::::::::
HVO_2552        ::R::::::::K::::::::G:::::::::::::E:::::::::::::::::::::Q:::
Hbo2301         ::R::::::A:::::I:::EG::::::S:::::::::::::L:::::::::N::::::::

consensus       NQDSVLVNGDAVSDEQRPVGMFDILAFTEREEYYRVFPDEGGRLALTPIDEDAAQSKLGK
#oth            24231.1..2331.14..1.1......32.2.11.1..21....3..31.322.4.1.1.
VNG1703         :T:G::::::S:G:VN::I::::::::PD:D:::::::::::::G::E::A:::G:::N:
hla0845         :N:::::::::I::::::I::::::::P::G:FF:::::::::::::SV::E::G:R:::
Hut3021         D::Q::I:::PE:::T::::::::::::::::F:::::G:::::::::::::S:::::::
NP4878A         E:::I:I::T:::::R:::::::::::D:::::::I::::::::S:::::::::G:::::
rrnAC1600       :E:N::I::K:I:::E::::::::::::::::::::::G::::::::A::P:::::::::
Hmu2025         :N::::I::K:::::E:::::::::::V::D:::::::G:::::::::::::S:::::::
HQ2830A         ::R:::::::V:::::::::L:::::::::::::::::EA::::::::::ISD:N:R:::
HVO_2552        :HQ:I:::::VA::VR::I::::::::VQ:::::::::::::::::::::A:S:S:R:::
Hbo2301         :::G:::::::I::::::I::::::::::::::F::::::::::T:::::AS::D:R:::

consensus       IVGKTQVSGGDTQLTLHDGETLLVEEDTE---YDGGDSIVVDNET---------------
#oth            123.36.4.135..31...4124132146122.443..2.14113111111111111111
VNG1703         VTD::T::::R:::NF:::SN:ALD::A-::::A::::V:::TD::::::::::::::::
hla0845         :TN:SV:P:::A:::::::TNV::DA::::::::TK::::::::S:::::::::::::::
Hut3021         ::::QF:P:::L::::::::::::S::AP::::E:N::V::E:DS:::::::::::::::
NP4878A         :::::::A::::::S::::::::::DA:A:::::TN:::::S:DG:::::::::::::::
rrnAC1600       ::T::H:::::V::G:::::::I::D:QT:::::A::::::G::D:::::::::::::::
Hmu2025         ::::RA:::DQI:::::::Q::::::::D::::::::::::A::DSESQGDSDSSSGDEP
HQ2830A         :IN:Q:::::AI:::::::ANIR:NA:EI:DT:NPR::L:I:::::::::::::::::::
HVO_2552        ::N::::G:::F:::::::A::V::DAS:::::S:K::::::::::::::::::::::::
Hbo2301         V:::QS:K::A::::::::SNVR::::E:PNQ:SSK::L:I:::::::::::::::::::

consensus       --KEIVAHFEYEEGALVTAVDGQHAGEIGEIEEIQVTPGSASNNVRVD--TDDGGFETVE
#oth            11311....3..1.......3.3.1.21.1132.4.12..24.2.61313323342..11
VNG1703         ::N::::::Q::::::::::A:::::D::::A::N:Q::::::T::::::DEN:::::IA
hla0845         :::DV:::::::::::::::A:::::R:::VAD:D::L::G::T:F:G::D:ED:Y::::
Hut3021         ::E::::::::::::::::::::::::::T:::::::::::E::::I::RE:GSII::I:
NP4878A         ::E::::::T::::::::::S:A:::R::T:D::::::::SA:::LI:AEN::ER:::::
rrnAC1600       ::G:V:::::::::::::::::A::::V::V::::::::::Q:::I:S:QDEGE::::::
Hmu2025         REG:::::::::A:::::::::A::::::::D::::::::S::::L:E:Q::GD::::::
HQ2830A         :::::::::P::::::::::S:K:S:::::::T:T::A::SE:T:S:S:::G::Q:::I:
HVO_2552        :::DV::::P::::::::::N:::::::::VT::I:::::GN:S:V:E:::E::E:::::
Hbo2301         :::::::::P::::::::::::S::::::TVT::T:::::GN:S:T:E:::E::E:::::

consensus       EYVVVIDENFTD-D----------------------------------------------
#oth            2.1.......13323343233411111111111111111111112122222222121112
VNG1703         ::::::::::VE:-::::::::::::::::::::::::::::::::::::::::::::::
hla0845         ::L::::::::GD:A:::::::::::::::::::::::::::::::::::::::::::::
Hut3021         ::::::::::VED:EGVEADDEAEADADDAADADADDEDAEADEADADAEAEEADGDDDE
NP4878A         :::::::::::::-::::::::::::::::::::::::::::::::::::::::::::::
rrnAC1600       :::::::::::-:-::::::::::::::::::::::::::::::::::::::::::::::
Hmu2025         ::::::::::V:E:AEDAASQD::::::::::::::::::::::::::::::::::::::
HQ2830A         P:::::::::::DEDTADPDVT::::::::::::::::::::::GDDVDNNADNDADDDT
HVO_2552        Q::::::::::GS:DESEARQA::::::::::::::::::::::::::::::::::::::
Hbo2301         Q::::::::::-:-::::::::::::::::::::::::::::::::::::::::::::::

consensus       --GGDDE
#oth            433221.
VNG1703         ::-E:::
hla0845         DEVDS::
Hut3021         AD:::::
NP4878A         :::::::
rrnAC1600       ::-::::
Hmu2025         PE:::::
HQ2830A         NTQEGN:
HVO_2552        AD:::::
Hbo2301         ::-::::