| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 1722 | HQ1062A | hla1341 | Hut1664 | VNG2524 | HVO_1819 | Hbo1664 | NP1708A | rrnAC2224 | Hmu0434 |
| 1096 | HQ1062A | 2020 | 1004 | 958 | 924 | 1037 | 1112 | 984 | 993 | 916 |
| 1286 | hla1341 | 1004 | 1865 | 1114 | 1016 | 1081 | 1123 | 1076 | 1121 | 1103 |
| 1297 | Hut1664 | 958 | 1114 | 1923 | 1131 | 1032 | 1005 | 1183 | 1144 | 1208 |
| 1180 | VNG2524 | 924 | 1016 | 1131 | 1600 | 972 | 987 | 1118 | 1078 | 1130 |
| 1217 | HVO_1819 | 1037 | 1081 | 1032 | 972 | 1710 | 1183 | 1019 | 1113 | 1061 |
| 1273 | Hbo1664 | 1112 | 1123 | 1005 | 987 | 1183 | 2082 | 1088 | 1121 | 1070 |
| 1300 | NP1708A | 984 | 1076 | 1183 | 1118 | 1019 | 1088 | 1673 | 1177 | 1168 |
| 1343 | rrnAC2224 | 993 | 1121 | 1144 | 1078 | 1113 | 1121 | 1177 | 1863 | 1306 |
| 1304 | Hmu0434 | 916 | 1103 | 1208 | 1130 | 1061 | 1070 | 1168 | 1306 | 1719 |
294 symbols consensus ----DDDRTDPDEDDVSDAA--------------------------DEPTETDPDPAAAA #oth 112423543533345754451111111111111111111111111144346475156463 HQ1062A MNSA:ENDSEIE::N:TQDE::::::::::::::::::::::::::NHDRGHHEEQMTEQ hla1341 ::::MNES:::AS:KG:::::::::::::::::::::::::::::::GT:D:TAE:SEPS Hut1664 :::M::RSPPA::EEPT:GS::::::::::::::::::::::::::SS:::DVT::::S: VNG2524 :::MP:Q:PS:::W:-----::::::::::::::::::::::::::A::VAVPV:----- HVO_1819 ::::MT:ES:EF:TGA:::-::::::::::::::::::::::::::E:TARP:A::R::: Hbo1664 ::MT:::::T::RNGR:::DPDATTGSTEDAAETPQDGERPGAIDR:::RP::G:AS:D: NP1708A ::MD::A::A::D:ALGAD:::::::::::::::::::::::::::EA:::DG::GE--- rrnAC2224 ::::MTEGAP:::T::EA:D:::::::::::::::::::::::::::GSAGHQ::DP::: Hmu0434 ::::MT:GAS:::T:EQRSR::::::::::::::::::::::::::A::SS:E::A:DGS consensus D-----------------A-DG--T----DADSTGAGAAPAD--------EAEDVPADVR #oth 3544443433423213232534454333253152447253433232344464653.51.2 HQ1062A :VTTQANPTDNESDDHNS:TTVSN:PSDTQ::M:ETQTV:STEADDEMNASGQSS:P::A hla1341 EPANESRSGADES::::G:L::DESAVS::G:-::DA:SNG::::::::GN::Q::PE:: Hut1664 NRPADQRDATADAVDNAKDPTEADDPID:RS:E:::ST:EGE::::::::TD:::::::: VNG2524 -:::::::::::::::::-:--::-::::HG:GESDTTE:--::::::::-----::::: HVO_1819 :E::::::::::::::::-AA:DTEPVDPAT::ET:::E:R::::DAGADADDA::E::Q Hbo1664 EDIESVDATDSEGDDGAG:T:AES:::::::E::NEKSTD::GTNGESTD:EPEI:R::Q NP1708A -:::::::::::::::::-:--::-::::QS::A:TE:D::E::::::::---:::K::Q rrnAC2224 :D:::::::::::::::G:D::ET:ESG:P:::ATE:T:::EPTSGTAVS::S:::S::Q Hmu0434 E:::::::::::::::::-:--::-::::P::DESLD::DG::::::::SLET::::::: consensus KYARFKKIDGAQYDRVNDFLRDRTYITAREWAIARLCADFRTETGVEMTKIGENLPELVP #oth 3.3..2.21.12.1.1.2...1...1...........1..............3...2..1 HQ1062A :::::::V:::::::::N:::::::::::::::::::S::::::::::::::T:::Q::: hla1341 ::E::::M:::R:E:::E:::::::::::::::::::::::::::::::::::::::::: Hut1664 S:E::Q::::GT:E:A:::::E:::::::::::::::::::::::::::::::::::::: VNG2524 T:D::S:M:::::::::::::E::::::::::::::::::::::::::::::R:::D::S HVO_1819 :::::::V:::::::::::::E:::V::::::::::::::::::::::::::N::::::: Hbo1664 :::::::M:::::::::E:::::::V:::::::::::::::::::::::::::::::::: NP1708A E:T::S:::::T:::A:E:::::::::::::::::::::::::::::::::::::::::: rrnAC2224 ::D:::::E:GT:::A:::::::::::::::::::::::::::::::::::::::::::: Hmu0434 ::D:::::::GT:::A:E:::E:::V:::::::::::::::::::::::::::::::::: consensus FMTDTYTPQAVNQARASFEEKVRKAGATFLYGAMSDFFTAEELDDLMYEVTEVAKFLLEV #oth ......1........21.22..221.........11.1..11..22...11.2....... HQ1062A :::::::::::::::S::::::T::::::::::::G::::D:::K:::::::T::::::: hla1341 :::::::::::::::Y::::::T::::::::::::G:::::D::EM:::::::::::::: Hut1664 ::::::S::::::::::::::::M::::::::::::::::D::::::::A:::::::::: VNG2524 ::::::S:::::::::::::::EL::::::::::C:::::D::::::::::::::::::: HVO_1819 :::::::::::::::SA:RD::::S::::::::::G::::::::EM::::::I::::::: Hbo1664 :::::::::::::::S:::G:::::::::::::::G::::::::E:::::S::::::::: NP1708A ::::::S::::::::S::D:::::::::::::::C::Y::::::E:::::::I::::::: rrnAC2224 ::::::::::::::::A::D::::::::::::::C::::::D:::V:::A:::::::::: Hmu0434 ::::::::::::::::::::::::::::::::::C::::::::::V:::A:::::::::: consensus EGVDLSVEEELEAEDRISSVMREVREASAALRHDEVECPECGHDIEVAE----- #oth ...1.2.31.111.11..2...1..23.42..4213612332445445533111 HQ1062A :::::::AD:::::::::T:::::::::DD::TT:NVDADTDA:TSTESGSHSH hla1341 :::::A:AD:::::::::E::::::AS::D::GE::R::::::VH:P::E:::: Hut1664 :::E:::G::::::::::E::::::DQ:V::::::A:::::::TF:::VDE::: VNG2524 :::::A:DD::A::E:::::::D::A::D:::::G::::N:::T::HGG::::: HVO_1819 ::::::::::::::E:::::::::::::TE::QE:LSDE:---------::::: Hbo1664 ::::::::::::::E::::::::::D::ED::RE:LADEASDD------::::: NP1708A :::E:T:D:::A::::::::::::::S::::::::LQ::N:::EM:TQDD:::: rrnAC2224 :::::A::D:M:::::::::::::::Q:::::::::C:::::NEFQ:D:::::: Hmu0434 :::E::::::::T::Q::E:::D:::H:::::::::S::::::::D:G:ET:::