|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 3046 | Hut0721 | rrnAC1298 | NP1440A | HQ3345A | hla1140 | HVO_2304 | Hbo1990 | Hmu1360 | VNG0090 |
1993 | Hut0721 | 3000 | 1779 | 1696 | 1652 | 1645 | 1612 | 1622 | 1813 | 1667 |
2325 | rrnAC1298 | 1779 | 3050 | 1951 | 1985 | 1987 | 2037 | 2049 | 2036 | 1996 |
2276 | NP1440A | 1696 | 1951 | 3004 | 1984 | 1969 | 1948 | 1987 | 1902 | 1893 |
2305 | HQ3345A | 1652 | 1985 | 1984 | 3375 | 1974 | 1951 | 2202 | 1862 | 1966 |
2399 | hla1140 | 1645 | 1987 | 1969 | 1974 | 3121 | 2122 | 2125 | 1824 | 1916 |
2345 | HVO_2304 | 1612 | 2037 | 1948 | 1951 | 2122 | 3059 | 2252 | 1909 | 1899 |
2379 | Hbo1990 | 1622 | 2049 | 1987 | 2202 | 2125 | 2252 | 3198 | 1946 | 1937 |
2293 | Hmu1360 | 1813 | 2036 | 1902 | 1862 | 1824 | 1909 | 1946 | 3061 | 2030 |
2295 | VNG0090 | 1667 | 1996 | 1893 | 1966 | 1916 | 1899 | 1937 | 2030 | 3062 |
450 symbols consensus ---------------MSDDRREAGFKERTRVADAREQLLDAASPHDRTERVPLGDADGRV #oth 11111111111112346512332..141.2134.123.13434135.13542254112.2 Hut0721 :::::::::::::::V:S::H:::::RQ:P:TA:::::RSVVTGV::::QIATEA:V::: rrnAC1298 ::::::::::::::MSNES:KS::::D::P:TT:::T::::V:::E:::::::R:::E:: NP1440A :::::::::::::::-MA:V::S:::::::::A:::::::-IP:I:::::IS:SA::::A HQ3345A MVVMDSTDATDAGDASDP:::SS:::N::KL:E::R:::GDI:::E:IDNLS::Q::S:: hla1140 :::::::::::::::::H::::::::R:::::::LAT:::::E::G:::SA::A:::::: HVO_2304 ::::::::::::::MNH::::T::::Q:::LS::::A::A::T::::IV:R::AE::::A Hbo1990 :::::::::::::MTNAH::QT::::::::L:::::T::A::T::Q::DTL:::RV:::S Hmu1360 ::::::::::::::::T::P:GV::R:Q::LGP:::R:::SL::VS:::A::IT:::::A VNG0090 ::::::::::::::::T::::T::::Q:::::E:::R::S:VD:LA::A::A:::::::: consensus LAEPVTAPRAVPHYDRAAMDGFAVRAEDTFGASDRSPAVLR---------RDESVGPGEA #oth 2.343413231.3.4......2..2.31.11.24.1.43.3323321112544323114. Hut0721 I::Q::PE::::::::::::::::N::E:V:::E:A::R:E::::::::::A:NM:::R: rrnAC1298 V:GEI::E::::::R:::::::::::::::S::Q::::S:::::::::::V::A:TT:T: NP1440A ::A::A:R:NI:::A::::::W::::::::::::::::::::::::::::PGD::::NT: HQ3345A ::::I:::::::G:E::::::W::Q:H:::::G::::K::QVADDTAESVP:TP:::N:: hla1140 V:::ID::AP::S::::::::Y:::::::::::::::::::AVGT:::::EAD:IA:::: HVO_2304 :::DAV::AD::G::::::::Y::::S::::::G:::N:::I::::::::V:GP:E::T: Hbo1990 :::A:::ANP::N::::::::W:::::::::::::::SI::VAVSEAESDA:AA:E::S: Hmu1360 ::SEH::R:P::::P:::::::::::::::::TR:::VR:E::::::::::S:::::NA: VNG0090 ::AD:E::::::::E:::::::::::A:::::G::::V::DV::::::::GTG::::::: consensus VRVHTGSELPEGADAVVMVEQVERVGDELEVFDAVAEGENVAPIGEDVADGQRLFEPGHR #oth 21.....21.31.1...21.4225433423112.22412..124.1..33225.123.13 Hut0721 :G:::::::::H:::::R::D:TERN:G:A:ET:::P::::::T:::::ADAT:::::D: rrnAC1298 A:::::::::::::::::::ET:VT::SVT::::::G::::::V::::EQ::T:Y:D::: NP1440A ::::::::::::::::::::AT:Q:::::::::::GA::::G::::::E:::::Y::::Q HQ3345A :::::::A::D::N::::I:::TQ::T:I::::::T:R:::::::::::ES:S:YN:::Q hla1140 A::::::AV:::::::::I::::T:A::V:A::::::::::GEA::::::::::::A::V HVO_2304 A::::::DV:::::::::::HT::L:::::::::L::::::GER::::RE:TP:::A::E Hbo1990 ::::::::::P:::::::::HADV::S::::::::T:::::GDA:::::E::E::DI::E Hmu1360 C::::::::::::::::Q:::::ADDATI:::::::S:Q::::V:D::S:::H::D:::Q VNG0090 ::::::::::A:::::::I:DA::R::RVD::A:A:G:A:::::::::S:::H:YDA::: consensus LRPSDLGLLKSVGVDAVTVYERPTVAVIPTGEELVQSDPGPGEVVETNGLTVSRLVERWG #oth .....1...123.5151422311222.2.....1.221.2..111...131.32114... Hut0721 ::::::::::AT:IEG::A:QP:EI::::::::V:E:::::::I::::::V:I::::::: rrnAC1298 :::::::::::::N:V:E:::::::S::::::::::N::E::Q:I::::Q::TQY::::: NP1440A ::::::::::GA:I:T:E:AA::E:::::::::::::::D:::I::::RF:::::A:::: HQ3345A :::::::::::::H:R:Q:::::::G:::::::::::N:::::::::::::::H:AN::: hla1140 :::::::::::::L::AP::::S:I:::::::::::::::::::I::::::::::::::: HVO_2304 :::::I:::R::::EE::LF:::R:S:V:::::::E::::::::I::::::::::::::: Hbo1990 :::::::::::::R:E::::D::::G:::::::::::::E::::::::::::::::H::: Hmu1360 ::::::::::AL::ET:A:FD::RFS:V:::::::::::E:::::::::Q::AQY:R::: VNG0090 :::::::::::A:::::A:::::::G:L:::::::AA::::::::::::G::AQY:S::: consensus GDATYRDVVTDDEAALRAAIERDLD-HDVVVTTGGSSVGERDLLPEVVDDLGEVLVHGVA #oth 13221.31.1..531.24.13411113.11.........2..12.111331.3.3..... Hut0721 ::PR:::I::::QQ::AD::::::::A::I::::::::::::::::::E:::D:A::::: rrnAC1298 :::::::I::::VD::::::SD::::::L:::::::::::::::::::SEI::::::::: NP1440A A:V:R:SI::::RE:::::V::::T:R::::::::::::::::I::::S:::::F::::: HQ3345A :I::::N:::::P:::::::Q:::T:K::::::::::::S:::V::II:T::S::::::: hla1140 :E:R:::::::::D::S::::A::::A::::::::::::::::::::I:SI::::::::: HVO_2304 :E:S:::I:V::ADL::E:V:S:::::::::::::::::::::I:::I::I::::::::: Hbo1990 :V::::N:::::P::::::VQ:::T:K::::::::::::::::I:::::E:::::::::: Hmu1360 :EP::::::::::::::S::::::::::LI:::::::::::::::A::::::T:S::::: VNG0090 :VP:R:G::::::::::T::REAV:S:::::::::::::A::HV:::IA:::T::::::: consensus LKPGHPVALGVVEDTPVVMLPGYPVAAIVNAVQFLRPLLKHVGHLPARPPPTTEATLTRK #oth 11.....221222311124......122...2.1.1.3325314445344.23514.31. Hut0721 H::::::GF:R::A:::L:::::::S:L:::::L:Y:AVAWA:NREPEA::::AGE:::: rrnAC1298 :::::::::::A:G::IL::::::::C::::::::::A:RQA:::RSTD::::K:E:::: NP1440A ::::::::::R:NGVTI:::::::::::::::::::::I::L:RF:SE:L:SQA:::::: HQ3345A ::::::::::II:::::II::::::::::::::::::I::YM::::CNS::::T:Q:SQ: hla1140 :::::::C::::D:::I:S:::::::C::::A::::::Q::::GTT:N:F::RR:::::: HVO_2304 ::::::::V::::G::::::::::::CV:::F:::::V:::::S::E::L::Q::::::: Hbo1990 ::::::::::::::::::::::::::C::::::::::::::::::DG::Y:SV::R:E:: Hmu1360 ::::::::F:R::E::ILV:::::::T::::::L:::A::KLA:::E:E::V:::R:E:: VNG0090 :Q:::::::C::D:::::A:::::::::::::::::::::A:::A::TAH:::D:V:A:: consensus IASEPGTRTFARVRLDGEGD-----------ERD----------ATPTRASGSGVLSSVA #oth 22.11.1.111..445634311111111111366322323333312.1.21.1.1....1 Hut0721 ::::::V:SYV:::HVA::-:::::::::::---::::::::::VE:I:SG:A::::::S rrnAC1298 :::::::::Y:::E:HD:DA:::::::::::DEQ::::::::TT:::::::::::::::: NP1440A :R::::V::::::T:SPTD::::::::::::GLE:::::::::::::::::::::::::: HQ3345A :P::::V:::::::TETTTAADSDIDTDAYIDTNTDTKNVISTI:K:::::::::::::: hla1140 VP:::::::::::SVE:T:E:::::::::::GG:GDGDDSALPA::::::::::I::::: HVO_2304 LP:S:::::::::K::PS::::::::::::::ST:::::::::::E:::T::::I::::: Hbo1990 :P::::V::::::::RE:N:::::::::::::G:NGGNDPVERI:E:::T:::::::::: Hmu1360 V:::V:::S:V:::::RD:::::::::::::::T::::::::::::::::::A::::::: VNG0090 ::::::::S:V::TRH:DE::::::::::::G:P:::::::::TV:::::G::::::::: consensus LADGWVVVPESREGYDAGETVAVEDWEWSA #oth 1.....2...46..232141.3.13..214 Hut0721 A::::::::::Q::IE::A::S:::::::P rrnAC1298 :::::::::::V::::::D::T:::::::Q NP1440A ::::::::::Q:::IP:D:::::Q:::HNV HQ3345A ::::::I:::::::L::::::S::Q::::T hla1140 ::::::::::P:::L::::I:D::L::A:Q HVO_2304 ::::::::::EI::::E:D:::::G::::: Hbo1990 ::::::A:::ET:::AK::::T::G::::: Hmu1360 ::::::::::DS::::::R::::::::::P VNG0090 ::::::::::DC::::::T:::::Q:::::