|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2283 | rrnAC1794 | Hut0398 | HQ1259A | VNG0332 | Hmu0865 | NP1202A | hla2419 | HVO_0696 | Hbo0840 |
1312 | rrnAC1794 | 2277 | 1008 | 1011 | 972 | 1225 | 1148 | 990 | 1029 | 1077 |
1526 | Hut0398 | 1008 | 2245 | 1235 | 1266 | 1234 | 1226 | 1240 | 1223 | 1271 |
1590 | HQ1259A | 1011 | 1235 | 2409 | 1298 | 1292 | 1328 | 1345 | 1387 | 1367 |
1677 | VNG0332 | 972 | 1266 | 1298 | 2266 | 1288 | 1309 | 1397 | 1335 | 1412 |
1631 | Hmu0865 | 1225 | 1234 | 1292 | 1288 | 2278 | 1340 | 1340 | 1377 | 1323 |
1640 | NP1202A | 1148 | 1226 | 1328 | 1309 | 1340 | 2234 | 1377 | 1407 | 1411 |
1712 | hla2419 | 990 | 1240 | 1345 | 1397 | 1340 | 1377 | 2372 | 1443 | 1494 |
1719 | HVO_0696 | 1029 | 1223 | 1387 | 1335 | 1377 | 1407 | 1443 | 2258 | 1508 |
1731 | Hbo0840 | 1077 | 1271 | 1367 | 1412 | 1323 | 1411 | 1494 | 1508 | 2261 |
338 symbols consensus --MDTRRALLVDAFATEPLAGNPAGVVPDADGLTDDQMQAIAAELGASETAFVLPSDD-A #oth 111323221.....221142.121..1.1223.32313232.1..111..1.2432341. rrnAC1794 ::::::Q::::::::A::TT:T:T::::E:::::::::::V:S::::T:::::::AE::: Hut0398 MSTESLDVS::::::::SF::::::::::GED:::::::::::::::::::::RSAE::: HQ1259A ::::SC::::::::S:D:::::::::I:::E::A:N:QR:::::::::::V:ITD:EV:: VNG0332 :::TET::::::::TDDSC:::A:::::::G:::::::::::::::::::::LR:::A:: Hmu0865 ::::::Q:::::::TD::M::::::::::::::D:E:FGK::S::::::::::::D:E:: NP1202A :::E::::::::::T:D::::::::::::::::A:::L::::::::::::::::E::::: hla2419 :::E:::T:::::::D::::::V::::::VGE:SE:R:GR::::::::::::L:DAGEG: HVO_0696 ::::S:::::::::T::::S::A::::::::::DAE::R:L::::::::::::CS:AA:: Hbo0840 :::Q:::T:::::::::::S::A::::::G:-::ES:::SV:S::AV::::::QS:GS:: consensus DRRLRYFTPTTEVDLCGHATIAAHAHLYEDGALDAGTHTLETNVGTLDIEIDDDGTVWMA #oth 1212.2.1.34.211111.11.2115.33524132133123.23.333113533.3..24 rrnAC1794 :::::C:S::K:LAQAET:AV::::A:::R:EI:DSEW:VA:AR:DVAV:TKQN:M::VE Hut0398 ::T::::::EN::::::::::::::R:F:Q:D:G::D:SIS::L:::S:::EA::::::: HQ1259A E::F:::S:::::::::::::::Y:Y:DAT:EI:P::::V:::::VIE:TV::::::::R VNG0332 ::::::::::::::::::::::S:::::D::::A::E::::::::V::::VAE::::::: Hmu0865 :::::::::ER:::::::::V::::L:::HDR::::::::A:AA::FE:::::::::::E NP1202A :H:::F::::::::::::::V::::W:A:T:R::D:SY:V::DA:AVAV::-:S::::LS hla2419 :E:::::::S::::::::::::TYGA:FAE::I:::DR::R::::D:E:T:::::::::R HVO_0696 :::I:::::QQ::::::::::::::::AAERD:EP:::::::::::::::LG:L:E:::T Hbo0840 :::::F::::R:I:::::::::T:::::R::VI::::::V:::::V::V:VEA::I:::T consensus QNPPTVRSVD------------LDYDRLADALGIDAAALRDVGADLPLAVASTGLPFLVV #oth 16512144311111111111112423111311.4341113121324.323.22.212121 rrnAC1794 :GRADITE::::::::::::::IP:SDV:::::LN::T:K::::::::VT:GV:ESW:M: Hut0398 GDD:D:::::::::::::::::IG:::::EI::LTET:FAG::M:::I:R::::M::::: HQ1259A :QS:::A:I::::::::::::::A::DV:::::::::::::I:DE::::I:::::::II: VNG0332 :::::::E:E:::::::::::::S:E:V:E:T:TE:::::GASD:I:::::D::::::I: Hmu0865 :ATA:::PA:::::::::::::VADEDV:::::::V:T:::::::F::S:::S::::::A NP1202A :R:AE:AA:E:::::::::::::::E:::T:::A:P:T:T:::::M:::T::::::Y::: hla2419 ::::::DVIEPDSGSDGDSGGG::A:::G::::::P:::::::::::V::::::::W::: HVO_0696 :DA::::PLE::::::::::::V::::::A:::V:D:::::::::::V:::::::::::: Hbo0840 :ES:::E::::::::::::::::::A::GE:::::P::F::::EAV:P:::::::::::: consensus PVNFLEHLGDADPDAAAIESLCDEHDAAGVYAFTFDTLDAD----STLHARAFAPGIGVD #oth .111114124351152.12514343112.3.411..1223211112.4.1.312134124 rrnAC1794 :::YF:::SGLTM:V::VD::::RV::::::P:::::VG::ATRR::F:G:::RV:-SRA Hut0398 :::YF:Q:::IA:NL::::R:::::::T:L:::::::::RE::::::V:G:L::::V::: HQ1259A :::::::V::VN::::::DT:VTSY::::M:I:S::::ESA::::::::::::V:SL:IT VNG0332 :ITY:SD:::::::FD:V:A:A:DVG:::::M:S::A::RA::::::A:G::WV::V::: Hmu0865 :::YF:::R::Q::M:::::::ESVG:E:L:::::::::G:::::A:I:::::V:LA::P NP1202A ::::::G:SAL::N:D:VA::S::L:V:::::::::::G:E::::T:::::M:::AL::: hla2419 ::::::R::E:E::M::::AITEA::V:::::::::A:::E::::::::G:::::A:::P HVO_0696 ::::::::SA::::D:::AD:AA::::::F::Y:::AI:G:::::::::::C::::::IS Hbo0840 :::::::::N::::FT:V:K:T::Y:V::L:V::::A:E::::::T:::::M::::::IP consensus EDPVTGTASGACGAYLRRFGAFDG-LPDEVRFEQGHFLDRPGRVRVRV------------ #oth .1.1.1..11.23.11253412.426343323.1.1.4....413133111111111111 rrnAC1794 :E:::A::::::A:FV::Y::L:D:TIEQIIA:G:::R::::T:S:DT:::::::::::: Hut0398 :::::::::::VA:::D::AEI:A:--TT::C:::D::::::::Q::::::::::::::: HQ1259A ::::::::A:::T:::DT:D:::V:F:ST::C:::::C::::YI:AQLIQPEQQNDKPDE VNG0332 :::::::::::A::::A:::::::DA:::MV::::::V:::::::::::::::::::::: Hmu0865 ::::::::A::AC:::::HN:L:::ERE:IVV::::::::::::::VT:::::::::::: NP1202A ::::::::AA:V:::::A:E::::E::A::VV:::::I::::K:::QA:::::::::::: hla2419 :::::::::::V:::::EV:::::DF:::L::::::::::::H::::::::::::::::: HVO_0696 :::A::::A::::::::QV::::S:M:::L:::::::V::::T:::Q::::::::::::: Hbo0840 :::::::::::::::::HVD::::E::EKMV:::::::::::::H::::::::::::::: consensus -----AGDEVRVGGRAVTTLDGELSVPAADD-DDIIEA #oth 11111334524...4114221.3241.4761131.1.2 rrnAC1794 :::::D:T::W:::::::A:::TVT:::V::::::::: Hut0398 :::::-E:G:F:::Q:::::T:DI:I:DIE::G::::V HQ1259A SNDSY:QGG:::::H::M::::TVAI:S:N::N::L:P VNG0332 ::::::::APM::::G:S::::T:A:::ETE:EE:L:: Hmu0865 :::::D:HD:::::::::::::::T::DSE:::::::V NP1202A :::::QA:P:T:::E:A:AF:::::::EPG:::::::: hla2419 ::::::::V:::::E::VSM::::R:::D::SGE:::: HVO_0696 :::::-:A:I:::::::QSF:::IV::EFA:::::::: Hbo0840 :::::-:T::::::F:::A:::S::::P:P:::::L::