9 genomes BUD0299 9 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi VNG2315 rrnAC2604 HVO_0219 Hbo1344 Hmu2930 Hut2247 hla0042 NP1392A HQ3663A

Pairwise sequence scores
Consensus score	1469	NP1392A	VNG2315	Hut2247	rrnAC2604	Hmu2930	HQ3663A	hla0042	HVO_0219	Hbo1344
712	NP1392A	1450	510	517	612	487	504	537	527	595
757	VNG2315	510	1922	542	573	554	493	547	547	578
856	Hut2247	517	542	1490	633	623	574	574	656	684
867	rrnAC2604	612	573	633	1516	818	560	609	609	741
792	Hmu2930	487	554	623	818	1477	570	522	549	628
867	HQ3663A	504	493	574	560	570	1601	656	652	728
925	hla0042	537	547	574	609	522	656	1952	733	742
978	HVO_0219	527	547	656	609	549	652	733	1494	848
1057	Hbo1344	595	578	684	741	628	728	742	848	1604

316 symbols
consensus       ------------------------------------------------------MDEKTE
#oth            122122222122122222222212222222111111111111111111112221.....3
NP1392A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
VNG2315         MFSTVWSPTSSTPSVSVCMLAFRVSSTVFKRLVYDGAGSQQTFHHGHTDSHSTP::::::
Hut2247         :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::D
rrnAC2604       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hmu2930         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
HQ3663A         :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::A
hla0042         MLATTGGLRSIPPETVKNDQTGRETYLPPAR:::::::::::::::::::NGSP:::::S
HVO_0219        :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::A
Hbo1344         :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::A

consensus       ELRDIFVEVTGSDTVTESQEESRGSLTD--DDAAVDERLRDIVARMRERYAFETELSDET
#oth            2..11.422213211.14.4332.1.5362324725211443135312233241412134
NP1392A         S:::::::A::T:::::T:T:TP:T:E-::P:GD:A:::AAV::DC::ES::S:G:::TE
VNG2315         ::::::QS::DD::I::::ADTH::::-::AEP::E:T:::TITT::D:L::H:D:DTA:
Hut2247         :::EL:E::A:T:::::::Q:G::T:SEI::EER::R:::E::EQ:::AFP:::::::DQ
rrnAC2604       ::::::MD:S:EEA::::::A:::::A:T::E:S:TD::G:V::::::::E:Q:::A::D
Hmu2930         :::::::D:A:E:::::R::DGH:::LS:::EGG:E:::LTVID:LC::FEVD:S::::A
HQ3663A         D:::::I:T::TE:::DE:QND::::I:S:::TT::D::HA:ITQI:N:FDD:LS::T::
hla0042         D:::L:::T:::G::::R:A::::T:::R::::VI:::V:EL::A:::::D:S:D:D:A:
HVO_0219        ::::::I:A::::::::Q:S::::::A:VD:PE::R::V:::::T:::::::D::FD:DA
Hbo1344         ::::::::T:::E::::T::::P:::::ELS::ERN::VARL::S::D::E:::AF:::D

consensus       LVRIVRGFYE-------GDD-------DAALAAALD-----------------------A
#oth            3232123215111111113211111111342.3232211111111111111111111233
NP1392A         :AAL:E:::Q::::::::A:::::::::GE:::E:S:::::::::::::::::::::::V
VNG2315         ::TV::Q::A:::::::::A::::::::D:I:::A::::::::::::::::::::::::I
Hut2247         R::L:::::G::::::::ES:::::::::D::::I::::::::::::::::::::::::V
rrnAC2604       ::TV::L:::::::::::S::::::::EETI::EIG:::::::::::::::::::::::T
Hmu2930         ::TV::RY::::::::::::::::::::::I:D:V:::::::::::::::::::::::::
HQ3663A         AAL:A:::FNPQFNSEA:::NQWSRIA::Q:::SI:D::::::::::::::::::::PDI
hla0042         YA::A::RF::::::::K::::::::::E:V:T:::EKREADGDDERSEAGAGSEAAPVV
HVO_0219        ::AL:V::FD:::::::::S:::::::::D::VE::::::::::::::::::::::::::
Hbo1344         :C:::::::D:::::::::S:::::::::E:::::::::::::::::::::::::::AA:

consensus       DEETVRDARLDLHLVRDADRDA---PFDLDRLR-RLLD-DGADDEACADALD--------
#oth            2444.462.32.1.3113.22411112232423254551236344232222211111111
NP1392A         P:A::V::::::R::::::T:I::::VP::TVA:EAVE::DTAIA:L::EAE::::::::
VNG2315         :AR:::Y::::::::::D:A:T::::LP::AV:DAVA:PTDP:PD:V:::::::::::::
Hut2247         :A:M:IA:::E:::F:ES:T:T::::VPW:EV:::H:R:ESE:::EV:A:::::::::::
rrnAC2604       ::SA:VEG::::::L::E:TE::::::::PEF:R:VA:::DPSVTEL:AEF:::::::::
Hmu2930         :TDV:TR::I::::L::E:T:::::::::A::::----:EADTA:TVREEF:::::::::
HQ3663A         :S:::F:V:MS:::IT::::K:::::::::::::S:RA:E:MTAT::::T:E::::::::
hla0042         :PA::::::F::::::E:::EVDDDA::YAD:K:::TA:E:RSIVE::::::::::::::
HVO_0219        SP:A::T::F::::::::::EF::::::A::FD:T::V::::::::IVE:::::::::::
Hbo1344         ::SD:FV::M:::::::S:::::::::S::T:::A::::::::::T::AE:NTQTDGDAT

consensus       ------ADPETVARYRRVAEAQARARRVSDRFRDEFEDLLTDADLSERLAADARRDGLEE
#oth            111111434452453331342453332313.1135232315.3314542232323...42
NP1392A         ::::::V:T:RLR:CV:ALA::::R:NE:::Y::R:::I:V::::ESSHT:GTTD::::D
VNG2315         :::::::A::DA:AACD:LR:KTAIQ:SN::Y:A:::NV:R:RA:T:::T:TVHE:::DD
Hut2247         ::::::L:::::EQ::A::D:RDE::N::H:::SAYR:AIP::::A:P:LD:VTE:::::
rrnAC2604       ::::::I:ESRA:H::::VA::DA:::::H::QSQ:::V::::G::TQH::GL:D:::D:
Hmu2930         ::::::LTEAEL::::::VT::T:::Q::G::QS:Y::V:H::GIGTV:TDGV:D:::G:
HQ3663A         ::::::TTT:::N:LV::I::E:ES:Q::H:::ASLAN::S:ST::::::T::::::::P
hla0042         :::::::::DA::K:A:::RVDLTST:AN:::::::R:::::::IEGSH:ET::N:::::
HVO_0219        ::::::VPV:V:SEC:P::::DI:SS:ANY::::D:AE::::D:::N:M:E:::::::R:
Hbo1344         TDDDAGI:AK:::H::::V:T:RE:T:AN::::T::TE::::S:::A:::E:::::::Q:

consensus       ATEDIET-----DVSL
#oth            .23122212221.132
NP1392A         :I:GM:V:::::::P:
VNG2315         ::DGQ:::::::::D:
Hut2247         :AA::::::::::::F
rrnAC2604       :::::DSLDSGA:::M
Hmu2930         :::::GSLEEDA::DF
HQ3663A         :ID:M:::::::::::
hla0042         ::K:M::::::::TN:
HVO_0219        ::::::::::::::::
Hbo1344         ::::::::::::::::