[J] (CCA1) COG1746 tRNA nucleotidyltransferase (CCA-adding enzyme) 9 genomes BUD0303 9 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi VNG0137 rrnAC2298 HVO_0521 Hbo0997 Hmu0096 Hut2969 hla0208 NP0320A HQ1438A

Pairwise sequence scores
Consensus score	3436	HQ1438A	VNG0137	NP0320A	Hut2969	rrnAC2298	Hmu0096	hla0208	Hbo0997	HVO_0521
2367	HQ1438A	3540	1994	1931	1894	1934	1956	1945	2168	2084
2414	VNG0137	1994	3434	2091	2003	1958	2105	2068	1973	2047
2597	NP0320A	1931	2091	3415	2200	2098	2200	2038	2174	2187
2524	Hut2969	1894	2003	2200	3418	2210	2280	2129	2109	2172
2517	rrnAC2298	1934	1958	2098	2210	3552	2358	1992	2087	2134
2661	Hmu0096	1956	2105	2200	2280	2358	3437	2197	2167	2266
2494	hla0208	1945	2068	2038	2129	1992	2197	3546	2041	2275
2564	Hbo0997	2168	1973	2174	2109	2087	2167	2041	3485	2410
2725	HVO_0521	2084	2047	2187	2172	2134	2266	2275	2410	3536

485 symbols
consensus       ---------MSDDLAAVVERVRDRVDPDDAEREALQAAAAALTARAEAAIADLPVDADVV
#oth            1111122234442444.2441.4.24.342.14313522451551433122322141223
HQ1438A         MSKGDAKDGFESEHQM:I:QI:::I:::S:::::M:RVMSQ:RN:ITTEVESF::S::::
VNG0137         :::::::::-MT:A:::I::::Q::::TP:::R::A:::SR::E:::::::E:::A::::
NP0320A         :::::::::--MS:ES:LSS:::::V:EAS:Q::::::V:K:::::::::T::::T::TR
Hut2969         :::::::::::EE:SG:LRA::R::E:T:::::R:EQ::HEVIG:::::LEERGI:G::M
rrnAC2298       ::::::::::::EFD:::GK::A:AS:T:D::AQ::RV:D:VM:D::::::::::E:E::
Hmu0096         ::::::::::::EVD:::::::E::T:G:D::AE:::V:DR::E:G:D:::S:::::H::
hla0208         :::::::::-M:::E::LS:::::AV:EP:::DR:RTV:VE:AD:TRE::::::::::::
Hbo0997         :::::MAESD:E::SH::A:::E:I:::E::QT::RET::T::S:V:DEL:A:S:::::L
HVO_0521        ::::::::MTNS::::::AA::E:I:::E:::R::AD:::::ES:VYD:L::::::::AL

consensus       QVGSTARGTWLAGDRDIDLFVRFPPDLDREALEEYGLAVGHAVLPDGHEEYAEHPYVKGT
#oth            2......2..31....2.2.11.14322..5..31.151.32...3.1..1.....12.3
HQ1438A         ::::::::::::::::::I:::::TE:N:::::::::K::SS:::S::::::::::IT::
VNG0137         ::::::::::V:::::::::::::S::P::Q::T::TT::A::::::::::::::::T::
NP0320A         L:::::::::::::::::::::::::::::R::T:::E::::::::::::F::::::::S
Hut2969         L::::::N::I:::::V:V:::::TAV:::K::AV::DI::::::::::::::::::V:E
rrnAC2298       ::::::::::T:::::V:V::C:::SI::::::::::::::D:::::R:::::::::V:E
Hmu0096         R:::::::::T:::::L::::C:::E::::E::::::S:::::::A::::::::::::::
hla0208         :::::::D::VS:::::::::::DAA::::Q:::::::::::::::::::::::::::::
Hbo0997         R::::::::::S::::::::I:::D:::::S::R::::I:N::::E:::::::::::V:E
HVO_0521        :::::::::::S::::::::::::A:::::E::A:::E:::::::::::::::::::::D

consensus       FDGFDVDLVPCYDVADATDIQSAVDRTPFHTEYLQERLDDRLAADVRVAKAFLKGIGVYG
#oth            32.12..1...21.3413313.......1.24..43111152.12.114.3.111.11..
HQ1438A         :E::E:::::::::DAGSEL::::::::H:NQ:::T:I:E:I::A:::L:K::::::A::
VNG0137         :E:YA::::::::::A::E:K::::::::::T::::H:::G::::::LC:Q:::::::::
NP0320A         YR:::::C::::A:::::::R:::::::::::::DG:I-E:::D:::L:::::T::::::
Hut2969         V::Y::::::::::E:::A::::::::::::::::A::::D::D:::LT:::::::::::
rrnAC2298       RE:YA:::::::A:EN::E::::::::::::R::::::::NS::E:::::Q:::::::::
Hmu0096         V::Y:::::::::::::AS::::::::::::R::A::::ET:::::::C:Q:M:A:::::
hla0208         YE:::::::::H::ET:G:LI:::::::::DA::SA:::EG::D::VL:::::::::A::
Hbo0997         :::::::::::F::D:GSSLR:::::::H:N:::TA::::E:::E:::F:R::::::A::
HVO_0521        Y:::::::::::::PS:S::R:::::::::NA::T:::::D:::::::F:R:::::DA::

consensus       SDLRTRGFSGYLTELLVLEYGGFEALLEAAADWHPPVEFDPEDHGTRSFDDPLVVIDPTD
#oth            .1...2....1.2....21311.223241224.3.1.22..34.242311.1.1.1....
HQ1438A         :::::::::::::::::I:::D:::V:K:::R:Q::::I:::A:::AAH::::I:V::::
VNG0137         :::::Q::::::C::::V:::::::M:A:IE::Q:::VI::AA:QQA::::::::V::::
NP0320A         ::::::::::F::::::V::::::::V::::::Q:::RL::KS::Q:::::::::V::::
Hut2969         :::::Q:::::::::::::H:::RS:V::::E:::::R::::T:::AT:::D::::::::
rrnAC2298       :::::::::::::::::::F:::R:F:::V:::::::RL::D:::SET::::::::::::
Hmu0096         :::::E:::::::::::::HD::RP:V::::A:T:::::::A:::RE:::::::::::::
hla0208         :::::E:::::::::::::L:::VP:V:S:RS::::::::::G:AE:T:::::::V::::
Hbo0997         :N:::Q::::::::::::::::::S:IC::::::::::L::::::S::::::::::::::
HVO_0521        :::::E::::::A::::VGH::::P::R:::::S:Q:::::::::::R:S::::::::::

consensus       PERNVAAVCSAENVARLQHYARELLAEPRESLFEPAD--PAPLDAEAVRAHLDRRGTTPV
#oth            .2.....12.22121121.1..31343.2433.244311242322331253342.2.112
HQ1438A         :A:::::::::T:IS:F:::::QF:E::KQTY::SPTEMA:EM:I:T::T::Q::::S:M
VNG0137         ::::::::V::A:::TV::H::RFR:T:S:DA:T::S::::::::A:L:S:I:::D:::L
NP0320A         :::::::::::A:::::I::::D:QTD::A::::::::::E::SPA:::KRVSE::::::
Hut2969         :::::::AL:TA:L::F::::::::::::::::::V::::D:::P:::::AF:E::::::
rrnAC2298       ::::::::L:ET:::T::::::D::::::V:::TED::::C:FE:AD:E:AVSQ::::::
Hmu0096         ::::::::L:T:QL:TF:::::::A::::TD::::SE::SE:V:::T:::WFE:::::::
hla0208         :T::::::L::::L::F:::::::::A:S:AP:::V::::::::PTD::D:::::E::::
Hbo0997         :T:::::::::::::::::::::::DD::VD::FGD::::E::S::D:QE:VR::::::M
HVO_0521        ::::::::::::::::::::::D::SD::::::FRP::::PA:::DG::S::::::::A:

consensus       AVVFDAPDLVDDQLYPQLRKSLDGIRRALDRRGFDVLRSAAFADERA-------------
#oth            .12123..2.2.1.1...31.35.2543.333..213.3222233522233233222211
HQ1438A         :L:::S::I::::::::::::VQ:::T::ETE::::I:T:::::DQ::::::::::::::
VNG0137         :::L::::V:A:::::::YR:R::VV:G:REH::::V:A::W::::::::::::::::::
NP0320A         ::R:::::I:::::::::D:::N::EG::::A:::P::::R::::S::::::::::::::
Hut2969         ::T:ET::::E:D:::::E:::::::GL:::H::::::A::::G:H::::::::::::::
rrnAC2298       :LR:A:::V:::::W:::::::::LCSE::::::E:::::::VEDDSGKPETLDTESRGR
Hmu0096         ::R:::::::::::W:::ER::S:VTD::N:::::::::::::::T::::::::::::::
hla0208         ::::::::::::::W::::R:::::V:G:ND:::::::AR:MT:GSGPEADGDGAKRA::
Hbo0997         ::::::::V:E:::::::Y::IA::ESE::::::API::TT::AD:::::::::::::::
HVO_0521        :::::C::::::::::::::::T:VADG::::::::F:R:::::TDG:EGQGEA::::::

consensus       --VLFAELAVAERPAVERHEGPPVHVREHAEGFYEAYADDSD--VYGPFIDGD-RYVVER
#oth            111124.232123.1121.4...14.15..33.143.214531133..121211..1...
HQ1438A         :::::I::MHRHC::I:::T:::IT:::::SE::T::ET:A:::T:::::::::::::::
VNG0137         :::V:V:::S::L::::::V::::S:GT:::R:::T::::DG:::::::V:D:G::::::
NP0320A         :::::V:C:::::::I:H:A::::G::D::::::D::::SDA:::S:::::E:G::A:::
Hut2969         ::::LF::E::::::::::V::::::::::D::::K:::-:G:::::::VSEE:::::::
rrnAC2298       DV::LL:F::::Q:::::::::::::::::S::FQK:D:N:E:::A::::::::::::::
Hmu0096         ::::L:::E::::::::::::::::::D:::::::T:::-::::AT::YV::::::::::
hla0208         ::A:Y:::E:::::::T:::::::A::K::AS:::S::::V:PET:::::::::::::::
Hbo0997         :::::V:::HRTL:N:A::D:::::::N::::::D::::-G:::T::::L::::::A:::
HVO_0521        ::A:::::S::::::::::::::::::Q::::::G::E:RE:::H::::L::::::::::

consensus       EREFTTAAAFLRSDALFDVALGAHVESALAED-YEVLVGDEVA-ALAEEFGVELAAYFDP
#oth            3.343124221323333212..43113423442221111421314.244.163.36132.
HQ1438A         ::TW:D:::::Q:ESI:NAG:::QI:E:::DT::T:::E::II:::TS:::ES:TQ::E:
VNG0137         D:DVR::GG:A:TE-:GT:::::RI::RV:SGD:D:Y:::A:VE::LP::ES:::::V::
NP0320A         A:DAR:P::L::EQ-::::S::T::AD:::D::::I:S:E::::S::PS::T::::::::
Hut2969         :::YH::TEL:E:::I::::::TD:::T:ETT:HT::::AA:G:T:::S::R:::G:L::
rrnAC2298       Q:A::::TG::S:A:VY::G::QRI::::ENG:::::::TDI:::::DG:::D::S::::
Hmu0096         D:::A::S::::::::SN::::T::A:::ESE:::::::E::::P::G:::::::D:V::
hla0208         ::::::VREY:E:::AG::::::Q::REF::R:-D:::::A:::T::PA:::P:REFYE:
Hbo0997         :::::D::EL::::T::T:G::S:::EQ:Q:E::::::::::G:G:::T::G:::Q::::
HVO_0521        ::::::::G::E::::::::::K::::T:R::G:D::::GD:::::::A::A::GR::A:

consensus       KP---
#oth            31111
HQ1438A         TASGV
VNG0137         :A:::
NP0320A         :::::
Hut2969         :::::
rrnAC2298       :::::
Hmu0096         :::::
hla0208         H::::
Hbo0997         :::::
HVO_0521        R::::