| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 2844 | hla1086 | HVO_A0498 | NP5156A | VNG2207 | Hut2486 | Hmu3009 | rrnAC2523 | Hbo1530 | HQ1023A |
| 1512 | hla1086 | 2852 | 1069 | 1030 | 1031 | 944 | 989 | 1095 | 1082 | 975 |
| 1619 | HVO_A0498 | 1069 | 2823 | 1188 | 1156 | 1137 | 1180 | 1141 | 1068 | 854 |
| 1577 | NP5156A | 1030 | 1188 | 2822 | 1015 | 1148 | 1135 | 1079 | 1102 | 878 |
| 1610 | VNG2207 | 1031 | 1156 | 1015 | 2845 | 1090 | 1316 | 1262 | 1069 | 822 |
| 1716 | Hut2486 | 944 | 1137 | 1148 | 1090 | 2902 | 1402 | 1394 | 1181 | 956 |
| 1829 | Hmu3009 | 989 | 1180 | 1135 | 1316 | 1402 | 2958 | 1502 | 1270 | 913 |
| 1830 | rrnAC2523 | 1095 | 1141 | 1079 | 1262 | 1394 | 1502 | 2892 | 1239 | 955 |
| 1761 | Hbo1530 | 1082 | 1068 | 1102 | 1069 | 1181 | 1270 | 1239 | 2804 | 1314 |
| 1335 | HQ1023A | 975 | 854 | 878 | 822 | 956 | 913 | 955 | 1314 | 2910 |
422 symbols consensus ----------SDAEDASGADADALVAALRDAADALAAARARVEDIGADR----------- #oth 111111234533665576245244333.45133543535442346.52311111111111 hla1086 :::::::MPGG::S:PVREAGE:-A:T::ERY:E::RIE::IA:L:R::::::::::::: HVO_A0498 ::::::::::--VT::AL::D:--:::::T:::T:RGR:EA:D:::REE::::::::::: NP5156A ::::::::::--MTEP:T::G::PAE::D:::TR:DQLQSEL:AD:L::S:::::::::: VNG2207 :::::::::M:::QP:PE::P::::G::::::::A:D:D:A::TY:V::::::::::::: Hut2486 ::::::MSTQ:TEP:EN:PSVE:::T::QR::T:HEQ::K:::EA::A:::::::::::: Hmu3009 ::::::::::-------M:::::-:TR::Q:DADRR:::E:::SV::E:SEGATEERAVN rrnAC2523 :::::::MAR::T:IE:::GPPGA:ER:EQ::::Y:R:HE::DSV:::A::::::::::: Hbo1530 ::::::::::MPD:TLTA::::T:RER:LA:R::H:::E:DI:S::EES::::::::::: HQ1023A MPIADLDNDA::TVIGLLETTESVL:E:Q:::EQYESITTQIS:T:H:A::::::::::: consensus -----------LRALADAYREATRLLDRYEERATGTG----DFEAYVEFQDRLAGLVDEL #oth 11111111112234313232437521241222.12421111.232133.13434752254 hla1086 :::::::::::IETA:::::R:H:V::Q:::D:V:::::::::GS::Q:RGEFGEA::AA HVO_A0498 :::::::::::::T::S:V:DV:EI:::::::::D--:::::L:G::::REA:SDRLE:V NP5156A ::::::::::T:ET::::::SVETV:::W:::::DWD:::::::G::K:RND:::TL:SI VNG2207 :::::::::::::::RT:LADLN::F:Q::GD:::::::::::QS:LD:::D:VA:::GF Hut2486 ::::::::::::DR:REH:E:MSA::::::::::SD:ETDV:M::FI:::EEI:RF:ET: Hmu3009 EESRAPAGEDS::::RT:CE:LRA::TE::G::::D:::::::A:FI:::::I:HFTND: rrnAC2523 :::::::::::::DCR:I:::LWN::ES:DG::::G:::::::::FM:::G:VGT:T:D: Hbo1530 :::::::::::VV:A:::::K:I::::N:::S:V:::::::::Q:::::::KFL:::E:: HQ1023A :::::::::::VVET:::::R::G:::::IDS:::::::::::Q:::::::KFLSC:E:: consensus PDDLPERDAFEAADDRLD----QRRLSESDFEAAREALEPARELVERLDERDDAREDYRE #oth 222233232.343326341112422.433..141.4414223542351333541524235 hla1086 D:A:AA-:::A::::AV:::::K:::::T::A:::D:::::GNY:DL:AD::E:LD:::A HVO_A0498 :A:VRHS:::ID:NES:TTG:ITSS::A::::Q::RE:D::::EAAL:::L:E::D:::S NP5156A :::I:D:E::VD::SHVKTGGVSKS:N:::::::::::A:V:ARA:Q:::LQA:ESAL:D VNG2207 D:::::::T::SLLELFK::::K::::AD::AT::RR:QD::D::GH::D:A::HD:::A Hut2486 :E:IDH:E:::TV:ETMH:::::KW:KS::::T::Q::::VG:::::VE::ERTL:R::: Hmu3009 DEE::::TV::EI:E::Q::::::::T:D::A:V::RIDA:E:TADP:V:WE::::R:G: rrnAC2523 SE::::::T::EI::F:Q::::::::T:::::Q:::M:S:IGD::G::::L:::::Q:KK Hbo1530 :EE::D:E:::::A::M:::::R:::R:R:::G::AD::A:ESY::Y::H:TETK:ELT: HQ1023A ::E::A:G:::T:A::::::::S::::K:::AS:::D:A::KRYI:Q:ESYNQTV:AVKT consensus ARRAARRRRDELADRIDELERLQELGDADLDAPVERLRDPIERYNDAVAEAFDSFRRNAS #oth .14324433343422223232254212112..1115122.124.1222532.34147441 hla1086 ::K:::EA:KA:DA:L:D:REVAGMA::::::D:D:::E:::S:::::R::::::YKS:: HVO_A0498 :G:RL:E:A:::DA:::R:::VR:::E::I::::DE::::::::D:::T::::R::AES: NP5156A ::K::K::LET:E:::A::::AI::::::::::::K:K::MAD::EGIEA::EA:LGD:: VNG2207 ::SRVADAA:AA::TVA::::::R::N::::::::T::Q::DA:D:::RS::E::::D:P Hut2486 ::HDVAV:ER:::::V:::AD:VA:::::::::::K::E:::A::Q:I::S::RRKHED: Hmu3009 ::::::::L:TV:::::DR:::L:::E::::::T::::::::::D::::D:::A::S::: rrnAC2523 ::TD:G::::::S::::::::::R:::::::::::H::E:::::::::T:::TD::::TP Hbo1530 :::D:KLLLKDTDS::S:::::V:::E::V:::::HI::::D:::E::S:E:Q::KQSE: HQ1023A :::NVTLH:RK:T:A::AHDEALSFA:VN::::::Q:L::::T:::RLHSE::E:ITTE: consensus AREVLAFLETAAAYPLVEFRSPPEDLREYVRDSPAGDEPIPTLLEYADYSRSKLDHYVDD #oth 1222222343125311.33531.44.3512435322311113.121.3.15...2..151 hla1086 ::D:FS::DR:DGT:F:DADV::T::::::T:YD::E::L::::::::::N:::E::::: HVO_A0498 ::::::W:AA:ES::::GTP::::R::::LETAAI::::::::V:::G::::::A:::G: NP5156A :::::S:IQ:::ET::::YT::::A:VS:LDTE::::HTLSE:::::E::P:::A::::: VNG2207 ::::I::VR:TE:::::G:EPA::G:ADF:A:RA::T::::Q:::::G::P:::::::AA Hut2486 :::L:::A::T:::::::Y:P:::::VA:::::E::A:::::::::::::V:::E:::P: Hmu3009 :::::D:V::T:L::::P::E:::::LA:::GHE::T::::Q::A::E::::::::::E: rrnAC2523 ::DA::VI:R:D:::::::::::AE:LT:::EHD::T::::K::::::::A::::::::: Hbo1530 :Q:::SVV:A:EWHS::::::::R::::F::E::DA:::::::::::::TG::::::AE: HQ1023A TAT:ID:::Y:DSFS::P:Q:::P:::RFA:E::DS::::::::KF:S::G::::::AT: consensus PAALKRAVATHRTYLERLDADPLTVDWPPPAAETLRWRCRELISVVARFADEDTVAALRA #oth 1441334.123211112.113.16232..24142.34555133222313.4161235113 hla1086 :G::RT:::V::::V:::::E:::L::::AGGDE:AYEID:::PL:S:V::DE:::T::S HVO_A0498 :KRFAA::G:NKRF::T::::::::S:::DP:AE::::TK::VA::S:::ADE:::RA:E NP5156A :DR:::R:::N:::::G:S:A::QL::::A::::::FQVS:RLPLA:KL:::P::T:::T VNG2207 :RT:::::GGN::::::::::::L:G:::AP:AA:QY:LD::V:::::::GD:VLEP:H: Hut2486 ARR:::N::::Q:::R:::SG::EIS:::::::::::::::::A::G:I:P::V::K::: Hmu3009 AD::::S:::SQ:::::::::::::G::::::D::::Q:N:R::::::::PD-V:ND::: rrnAC2523 A:::RS::::RQ:::R::::E:VR::::::S:TA:P:L::AYR:::::::::SV:::::E Hbo1530 ::M:QTS::V:::::::::::::C:SF:::S:::::RKAN::V::LD:::S:T:I::::T HQ1023A ::L:QTT::V:Q:F::::::E::MIER:::T:G:::QFTG:A::ILG:::S:K:I:R::: consensus VRELTRRDDYDRLRDAAVAREELTDAERERLQSGAVEDELAAAREARDRLRDALDETDGL #oth 124243332.22..31231263.2341231153.3224226422343533532.545554 hla1086 ::D:A:DEE:::::R:::V:DA:DEP::GL:KR:VID:RVRE:ERTVSIAE:V:A::KRE HVO_A0498 :H:::YEES:::::::::::A:::EDQ:::::R:V::E:::D:::E:E:VA:C::ANPP: NP5156A :S:R::::::EE::T::A::::::KT::Q::::::I:A::E::::E:T:::S::GR::-- VNG2207 ::RRV:G::::::::::::TH:::AD:KQ:IAA:-:A:D:QR::AREQ::::::::Y--- Hut2486 ::::PS:T::E:::ESVR:::Q:::E::D::E:::::A::::T::G:EK:VA::E:HPER Hmu3009 ::A::::SE::::::S:::::R:::::::::WT:::A::::DL:AE::A:::::::LS:: rrnAC2523 ::G:AE::::E:::ES:L::S:::E::::::A:::::Q::SV:::::AAID::::TYSP: Hbo1530 ::::::::::::::T::R::T::::::L:::R:::::T::HEL:::H:K:A:::S:A::- HQ1023A L:DQSYD:S:AQ::T:LR:QI::SAD::::::T:TMA::RD:LVT::T::TE::TQ:QSQ consensus -- #oth 32 hla1086 :: HVO_A0498 DD NP5156A :: VNG2207 :: Hut2486 :: Hmu3009 A: rrnAC2523 :: Hbo1530 :: HQ1023A VE