|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 3165 | VNG1255 | NP3960A | Hut1236 | rrnAC1133 | Hmu1443 | HQ2405A | hla2675 | HVO_1338 | Hbo0213 |
2451 | VNG1255 | 3457 | 2120 | 2136 | 2054 | 2128 | 1897 | 2053 | 2075 | 2036 |
2453 | NP3960A | 2120 | 3181 | 2070 | 2092 | 2206 | 1948 | 2093 | 2142 | 2037 |
2505 | Hut1236 | 2136 | 2070 | 3150 | 2237 | 2295 | 1882 | 2053 | 1951 | 1964 |
2475 | rrnAC1133 | 2054 | 2092 | 2237 | 3182 | 2422 | 1924 | 2103 | 2087 | 1982 |
2594 | Hmu1443 | 2128 | 2206 | 2295 | 2422 | 3146 | 1932 | 2147 | 2134 | 2035 |
2199 | HQ2405A | 1897 | 1948 | 1882 | 1924 | 1932 | 3175 | 1945 | 2191 | 2212 |
2400 | hla2675 | 2053 | 2093 | 2053 | 2103 | 2147 | 1945 | 3550 | 2225 | 2142 |
2497 | HVO_1338 | 2075 | 2142 | 1951 | 2087 | 2134 | 2191 | 2225 | 3186 | 2382 |
2370 | Hbo0213 | 2036 | 2037 | 1964 | 1982 | 2035 | 2212 | 2142 | 2382 | 3161 |
483 symbols consensus -----------------------------------------------MSVDDHAEELASD #oth 11122222222222212221122121222222212222221111111.41232..1...3 VNG1255 :::MHTVAVSGPPETGFRSVVCARRWLANPYAPGRPTVRC::::::::N::::::::::: NP3960A :::::::::::::::::::::::::::::::::::::::::::::::::L::A::D:::S Hut1236 ::::::::::::::::::::::::::::::::::::::::::::::::::E:K::::::: rrnAC1133 :::::::::::::::::::::::::::::::::::::::::::::::::LE::::::::: Hmu1443 ::::::::::::::::::::::::::::::::::::::::::::::::TL:E:::::::: HQ2405A ::::::::::::::::::::::::::::::::::::::::::::::::D::::::::::T hla2675 VGRSASSCRFAGGRVGSLVVVSVRWWSCRFAGRGGEPFCAVASNPDP:D:NS:::::::: HVO_1338 ::::::::::::::::::::::::::::::::::::::::::::::::EL:Q:::::::A Hbo0213 ::::::::::::::::::::::::::::::::::::::::::::::::N::E:::::::T consensus LGVDKEEVKEDLQNLVSYSVPLDEAKQSLRRKYGDGG--GGGS-GAPSAKDIAEIDTDDG #oth .....3..131.22.14....31..11.2...1.233114244164.4223152123332 VNG1255 :::::A::::N:::::E:::::E:::R::::::::DD:::AP:::G:T:V:::DV:::S: NP3960A :::::A::::::EK:::::::M:::::::::::::E:ST:::ADD::TT-::E::T:::D Hut1236 :::::A::::::::::::::::E::V:::::::::TD::DS:G:SI:E:-:V::VS:G:D rrnAC1133 ::::::::TR::E:::N::::M::::::::::::::S::S::D:ST::S:A:N:VS:E:S Hmu1443 ::::::::::::A:::N::::M:::::::::::::::::E::T:-T::S::::::SAS:S HQ2405A :::::T:::S::E:::A::::V:::V::I:::::SDT::-:NA:AV::T::VDAV:I::: hla2675 :::::::::A:::::LE::::I::::::V:::H:G::::::ST:PT:DSV:VD::T::HD HVO_1338 :::::::::S:::::LQ:::::::::::V:::H:G:S::S:::D:::AT:R:VD::P:G: Hbo0213 :::::S:::S::ED:L:::::I::::::I:::H:GDS::-:E::T::T::GVSD:TPE:: consensus NVTVTARVLTVGTRSIRYQGDDQVIREGELADETGKISYTAWEDFG--LEPGDSVTIGNA #oth 3.1..2311.3.4.1.2.2.2221.3..12..21.3....1.32.111231.122341.. VNG1255 ::::::T:::A:K:::::::::H::G:::::::::R:::::::E:::::::::T:::::: NP3960A R:::::::::::K:::::D::::T:F::::::G::R::::::T::S:::T:::T::V::: Hut1236 A:S::GVF::::::::::::S:H::H:::F::::::::::::::::::V::::V:R:E:: rrnAC1133 ::::::V:::S:R:::Q:N:EQH:::::::::::::::::::DG:SGD:Q::QT:QL::: Hmu1443 ::::::::::::Q:::Q::::E:::F:::::::::T:::::::::::::AA::TI:A::: HQ2405A :::::V::I:::C:T:Q::::E::::::I::::::T::::::Q:::::F::::::::::: hla2675 G::::V::::Q:::T:::::::LT:::::I:::::V::::::Q:::::F:::::L:M::: HVO_1338 ::S::V::::::::::V::::E:T:::::::::S:V::::::Q:::::F::::::V:::: Hbo0213 :::::VK:::::R:::::::EE:T:::::F::A:::::::S:::::::F::::::::::: consensus GVREWDGEPELNLGQSTTVAVEDEPI-----DVPYD--IGGDRDLADLAPGDRGRNVEVQ #oth 2....1.5....213122244333421111124232112..425.43141.1..221113 VNG1255 S::::E:S::::F:E:A::TSA:GD::::::EMAAE::V:::::::A:SA::::::::AV NP3960A :::::::N:::::::::::TL:E::L:::::S::::::V::Q:N:I::E::::::T:::R Hut1236 ::::::::::::::ER:::RLS:DA::::::::::::::::::R::A:::::::V:A::: rrnAC1133 :::::::Q::::::D::DPE:V::TL::::::ID::::V::RAA:Q::::::::IT:::: Hmu1443 :::::::R::::::E::SIERS:D:L:::::::::E::::::AE::T:::::::I::::: HQ2405A :::::::Q::::I:::S:::::TDS:SVVEH:L:CP:::::HTS:LE:R::N:::V:D:E hla2675 :::::E:::::::ND:::::IA::TV:::::E:DQE::V::::S:V:I:A:::::::::R HVO_1338 :::::::K::::I:A:S::G::S:TV:::::ET:::DR:::EA::I::QA:::::T:::R Hbo0213 N::::E::::::::::S:::::TT:V:::::ET::E::A:::T::V::RA:::::::::: consensus VLEVEEKTIDGRDGETEILSGVLGDETGRLPFTDWDPHAEIEEGASVRIEDVYVREFRGV #oth 12.41212.1..2.1.2.22..31.2131......31144223.224.2212111....1 VNG1255 :T::::R::::::::::::::::::::A::::::::::G:::A::::::::::::::::: NP3960A :::::Q:::::::::::::D::F::::S::::::::::DA::A:T:::L:::::D::::: Hut1236 :::R:Q:I:::::::::::::::A:::A:::::::::::G::::::I::::AF::::::A rrnAC1133 :::C:Q:V::::::::T:::::::::S:::::::::::D:::::::::LDETF::::::A Hmu1443 ::::::::::::N:::D:::::F:::ST::::::::::::::A:::I:::::F::::::A HQ2405A II:I::RV::::::::T:H:::IA:GS::::::::GARSILSS:ETY:FD:::I:::::A hla2675 ::::D::::S:::::::::E::V::A:AK::::::Q:RS:L:P::DL::::::::::::: HVO_1338 ::::DSR:::::N:::T:::::VA:::::::::::A:RPDV:::::L:LS:::::::::: Hbo0213 I::S::RV:S::E:D:T:R:::VA:::::::::::GARP:LR::ETF:F::::::::::: consensus PSVNVSEFSTVTALDRTVEVTDDAPRMSIREAVDSGGLFDVELTGNVIEVRDGSGLIERC #oth .21.112.11124133414242413225131..23..31...24123121.1.....2.. VNG1255 :::::::::::ER::HE:::-GGPT::A::D::AR::AY::::V:S::DI:::::::K:: NP3960A :::::TA:T::E:IPE-:A:S:E:TA::VQ::::A::VY:::::::I::::::::::Q:: Hut1236 :AI::::::::::::::::A:::::::A:::::EG:::::::V::TA:A::::::::::: rrnAC1133 :::::::::A::::::::G::E::::L:V::::E:::::::::A:::::::::::::::: Hmu1443 ::I::::::A::P:::::SA:EN:Q::P::::::::::::::::::I::::::::::::: HQ2405A :Q::L:T:T::ES:SEDI:I::::KQVE:G:::::::V::::IIAT:L:::E:::::::: hla2675 ::I:LT::::::P:PDP:::AE::::L:VAD::A:::M::::IV:::L:I:::::::::: HVO_1338 :Q::L:::T:LDV::DP:S:::S:::LK:G::::A::M:::::L:::L:::::::::::: Hbo0213 :Q::L:::T:::P:A:D:P:N:E::::R:G:::A:::M::::VV::LL:::::::::::: consensus PECGRVVQNGQCRSHGAVDGEDDLRVKAILDDGTGTVTAVLDRELTAEVYGGTLADAREA #oth .2.2.12.21...3..4.1221.1.1..11...112..11.121..142...3131.323 VNG1255 :D::::::T::::Q::::EA::::::::V:::::DS:::I:::::::D:::::::::::Q NP3960A :::::::::D::::::K::P::::::::::::::DS::VI:G::::E:::::::T::L:: Hut1236 ::::::::::::::::::E::::::T::::::::::::::::E:::::::::G:E:::DH rrnAC1133 ::::::I:::::::::::E::::::T::::::::D:::::::D::::R::::D:D::::H Hmu1443 ::::::::::::::::T::AV::::T:::::::S::::V:::D::::D::::D::::T:H HQ2405A :::N:AL:G::::E::::EAKN:M:::::V:::::A:::I::::::ES::::SMDE:MSV hla2675 ::::::::::::::::D::::::::::::V::::D:::V:::D:::::::::G:D::LD: HVO_1338 :K:S:::::::::Q::E::::::M:::::::::::::::I:::D::E:I::::M:::M:: Hbo0213 :D::::L::::::T::D::::::M:::::::::S:::::::G::::EQL::::M:E:M:: consensus ARDAMDKEVVADAIADTIVGREYRVRGNLSVDEYGANLEATEFEESDDDPAERARALLAE #oth .111..23.1114.23521.21111..2....11..1.3144.14341..141.443.4. VNG1255 ::E:::HS::::T::EDV::::F::::H:::::::::::TIA:A:R:::::A::A:F::: NP3960A :::E::RG::::D::E:LA::::::::S::::::::::D::D::::GG:::S::ERF::: Hut1236 ::::::RD::T:::REA::::AF::::S::::DF::T:N:::::SRR::::A:::EV::: rrnAC1133 :::::::::::ER:S:R::::::V:::S::::::::::T:ST:A:A:::::T::Q:::Q: Hmu1443 :::::::::::ER:::R:::L::V:::S::::::::::D::S::A::::::::::T:::: HQ2405A ::E::::S:I:EE:RS::::::::I::::::::::::::TA:::QTS::::T::QSV:E: hla2675 :K:::::::::E::::SL::HA::::::::::D:::::D:S::ALA:::::DA:::A::: HVO_1338 ::E:::::::::D::::L:::::::::::::::::::::TD::::T::::::::A:::T: Hbo0213 ::E:::::::::E:RRQV::::F:::::::::D::::::::::A::E:::T:::T:::G: consensus VDA #oth 145 VNG1255 ::: NP3960A :GR Hut1236 :EP rrnAC1133 A:T Hmu1443 :EP HQ2405A :TS hla2675 :GE HVO_1338 :R: Hbo0213 :T: