| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 1563 | NP3340A | hla1311 | Hut1983 | rrnAC1519 | Hmu2094 | HQ3168A | VNG1648 | HVO_2455 | Hbo2345 |
| 1017 | NP3340A | 1524 | 861 | 831 | 783 | 821 | 751 | 797 | 758 | 785 |
| 1058 | hla1311 | 861 | 1590 | 845 | 817 | 777 | 714 | 836 | 830 | 842 |
| 1091 | Hut1983 | 831 | 845 | 1569 | 881 | 920 | 770 | 795 | 790 | 845 |
| 1054 | rrnAC1519 | 783 | 817 | 881 | 1594 | 1089 | 777 | 778 | 765 | 817 |
| 1101 | Hmu2094 | 821 | 777 | 920 | 1089 | 1596 | 809 | 789 | 819 | 829 |
| 972 | HQ3168A | 751 | 714 | 770 | 777 | 809 | 1801 | 802 | 847 | 932 |
| 1003 | VNG1648 | 797 | 836 | 795 | 778 | 789 | 802 | 1631 | 875 | 765 |
| 1058 | HVO_2455 | 758 | 830 | 790 | 765 | 819 | 847 | 875 | 1648 | 971 |
| 1065 | Hbo2345 | 785 | 842 | 845 | 817 | 829 | 932 | 765 | 971 | 1565 |
251 symbols consensus ---MTRVKVCGITREADLAAVVAAGADAVGIIADVPVDTPREVDPERAAELAAAVPPFVT #oth 11112...1..3.445.331243..1..2.4.62.3.21..124542.34141322.111 NP3340A :::::::::::::NRS::DTA:D::V::::L:V::D:Q::::IS:QQ:::::::T::::: hla1311 ::::A:::I::L::G:::R:AID:::::::V:SE::::S::::::AT::::L:D:::::: Hut1983 :::::::::::H:::::VR:S:::::::::V:SG:::E:::::A:::::D:LD::::L:S rrnAC1519 ::::::::I::V:DTE:RD:::T:::::::::HG::::::::::EGT:ETI:DG:::::: Hmu2094 ::::::::::::::RE:RE:::::::::I:V:NG:S::::::::D:T::A:V:G:::L:: HQ3168A MMSR::::I::::TKN:::::S::::::A:::T::T:E:::S:TV:::TQ:V:TAS::LS VNG1648 :::::::::::L:T:R:H::A::::::::::::::::E:::::SV:T:TA:R::T::::: HVO_2455 :::::::::::V:D:T:::::D::::::::A:C:::::::::IPR:::R::F::A:::L: Hbo2345 ::::V:::I::V:S:S::R::ER:::::::F:::::::::::LSLD::::::::AA::L: consensus SVLVTMPDTVEEAVELVRRVQPDAVQVHGELDPDELAALRARVDADVIAVVDADDPARAR #oth 31..1.144245142355326..12.2.13442534542436254523412224545415 NP3340A A:::::A:VPDA:T:::EA:R:::::::::ST::A::S:G:A:E::::KAT:---:GT:A hla1311 AT::::::SA:R::::L:TIC:::I:L:::WT:::IRFI::ETERK:LLA:::::::::E Hut1983 G::::::E:::::R:::AET:::::::::T:::E:VE::T:EISQPILVAL:H:AELD:- rrnAC1519 ::::M::T::Q:::RRID:IE:::::::DG:S:A::G::NN:ITQ:IV:::E::A::IED Hmu2094 :::::::EA:QSVARR:ET::::V::::DG:T:TQ:G:::R::::QLV:::::EHAEIEA HQ3168A T::::::NC:AD:IDITG:::::VI:I:::Y:AS::KQINES:T:::::::::EM:S::: VNG1648 :::::::A:P:H::D:::T:A:::::L::D:PVGDA:YVA:NTPCP::KA:T:G:QSA:: HVO_2455 TT::::::S:DH:RD:A:E:G::VL:L::DFAA:D:DS:::-TGVG:VP::::T:L:::: Hbo2345 TT:::::E::S::I:VGS::K::V::I:::F:AEQFR:I::G:::RIA:::::EQ:Q::C consensus -YADVADALLVDSV--DDSGA-GGTGETHDWDRTRELVDRLDAPVVLAGGLTPENVAEAV #oth 431521.1211.1311134.11....51...332233235123.12......14..42.. NP3340A T:DGH:::V::::L:::E::::::::TV::::::G:::ES:QS::::::::::::::D:: hla1311 EFDR:::::VI::T:::::::::::::::::E:AGD:A:::TS:::::::::AD:::::: Hut1983 ::::A::G:V:::L:::EA:G:::::Q:::::::A:I:E:::V:IL:::::::::::::: rrnAC1519 :::TH::::::::::::AD:G::::::::::E:::D:::S::V:I:::::::::::T::: Hmu2094 ::::A::::::::::::AE:G:::::::::::::::I::T:::::::::::::K::GD:: HQ3168A SV:S:V::I:I::::::TD:::::::H::::TT:A:IATM::S::I:::::::S::KS:: VNG1648 :::::V:::::::PPT::A::G::::R::::AA::AFA::V:T::::::::::A:::D:: HVO_2455 DL:P:V::I:::TP::S:::::::::::::::AS:D::AAV::::I:::::::D::V::: Hbo2345 DLDSAV::IV::::::S:K:::::::K::::EQ:AKATAE::::::::::::::::T::: consensus ETVAPFAVDVASGVEAEGGVKDHDAVRAFVARAGRAREAA-------------------- #oth 4114.11..1.....453.5..12..42.143.356476354332222111111111111 NP3340A :AA::::::::::::::S:Q::A:::S:::DA::GCQ---:::::::::::::::::::: hla1311 RAAD:::::::::::LTD:R:::N::AR:::N:::EM:L::::::::::::::::::::: Hut1983 :::R::G::T:::::RD:::::::::EQ::D:::EP:VV::::::::::::::::::::: rrnAC1519 :::E:::::::::::SA::T::::::GR::RN:KQ:P:G:V::::::::::::::::::: Hmu2094 G::R::G:::::::::::::::::::::::QQ:K::DA::VEAGR::::::::::::::: HQ3168A Q:::::G::::::::DT::S::::::A::IN::T:VDIDTNNETERSIETTNTTDSSTED VNG1648 D::D::::::::::::RP:E:::A::S::::::TATPDPTLT:::::::::::::::::: HVO_2455 R::E:YG:::::::::S::::::::::::::A:KT::G:VDDHEEVVA:::::::::::: Hbo2345 :::N:::::::::::SS::::::::::::::N:AER:R:TA::::::::::::::::::: consensus ----------- #oth 11111111111 NP3340A ::::::::::: hla1311 ::::::::::: Hut1983 ::::::::::: rrnAC1519 ::::::::::: Hmu2094 ::::::::::: HQ3168A SISATTPERNK VNG1648 ::::::::::: HVO_2455 ::::::::::: Hbo2345 :::::::::::