| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 1955 | VNG2204 | HQ3649A | hla1594 | Hut2245 | Hmu2952 | rrnAC2629 | NP5160A | HVO_0234 | Hbo1264 |
| 891 | VNG2204 | 2152 | 498 | 464 | 537 | 478 | 714 | 720 | 619 | 706 |
| 832 | HQ3649A | 498 | 2541 | 567 | 593 | 625 | 520 | 657 | 600 | 819 |
| 1046 | hla1594 | 464 | 567 | 2319 | 614 | 782 | 621 | 726 | 753 | 828 |
| 1040 | Hut2245 | 537 | 593 | 614 | 2046 | 787 | 814 | 751 | 793 | 684 |
| 1148 | Hmu2952 | 478 | 625 | 782 | 787 | 2006 | 790 | 820 | 715 | 801 |
| 1158 | rrnAC2629 | 714 | 520 | 621 | 814 | 790 | 2164 | 893 | 818 | 753 |
| 1231 | NP5160A | 720 | 657 | 726 | 751 | 820 | 893 | 1925 | 912 | 912 |
| 1157 | HVO_0234 | 619 | 600 | 753 | 793 | 715 | 818 | 912 | 2073 | 1005 |
| 1232 | Hbo1264 | 706 | 819 | 828 | 684 | 801 | 753 | 912 | 1005 | 2041 |
400 symbols consensus ----------------------D-DIAIDEKRVYADKRGTTTAYVASELGVTAVAVSDDQ #oth 1111111111222222222232231332511121444444531221344.2351632236 VNG2204 ::::::::::::::::::::::-:MP::RDDH:FVEDTDAHV::I:AG::I::AHIGAST HQ3649A ::::::::::::::::::::::-:MPT:::::::TNTV::E:V:LG:::::LG:T:::AV hla1594 :::::::::MGPPAERPIMAPAED::S:E::::::GTA:R:D::::T:S::VR::L:A:K Hut2245 ::::::::::::::::::::::-:MGEMA:D:I:::R::KADV::G:P::L:L::::::R Hmu2952 ::::::::::::::::::::MS:D:::L::::I:EER:EEVH::::C:M::AT::L:::: rrnAC2629 MPTQVKTLRMRSKHTKRRYEVS:D:::LS:::M:GA::PE:H:::::G::::R:ETAGG: NP5160A ::::::::::::::::::::MS:E::S:H::::::::SA::::L:::SV:::E:KI:::I HVO_0234 ::::::::::::::::::::MA:F:LS::::::::::S:KQ:::::AGV::VT:D::::L Hbo1264 ::::::::::::::::::::::-:MPT:::::::T:NT::E:VF:::DA::V::S::::L consensus VGRFGLAHRCAARDVAG-----ADGRVAVATDEDVL---------------VGDDDAFEA #oth 1.3.425412611.2131111136463331.32124423221111111222465245164 VNG2204 ::E:A:E:::D:::::A:::::TRLG::A::ADG:VLST::::::::::::APP:SS:AD HQ3649A ::E::::Y:G:V::ITT::::::GPY::T:::DG::LADHRRRREDAGDEASI:ELQ:YN hla1594 I:A:DMVA:EP:::A:VLPRRD:PDLLG:::PDGLQVAP::::::::::::::::L:::P Hut2245 ::::R:LR:G:V::::T:::::G::SILIG::::IYRS:::::::::::::TDGG:S:D: Hmu2952 I:::::E:G:T:::I:::::::S:::L:::::::::::::::::::::::::::EAG:T: rrnAC2629 I:::S:SE::N::::::::::::S:E::::::::::::::::::::::::::LT::G:VP NP5160A ::E:S:::::Q:::::T:::::GN::A::::EA::::::::::::::::::::V:GE:VD HVO_0234 ::G:RIDR::T:L:A:::::::SP:E:V:::::::::::::::::::::::LVQG:DYHE Hbo1264 ::G::I::::H:::::V:::::GTETL::::::::FCADLT:::::::TTDSA::L:::: consensus T--GFGPA-----TAV-GFDGD-----AVLAADD-GRIARF--DADE-----------W- #oth 41122221111113..1.234611111633133331423234446331111111111111 VNG2204 I::::PA::::::V::T::::-:::::T:::::ED::::QYDP::GA::::::::::::: HQ3649A IGD:I:SV:::::S:::::ETTTQNKV:LI:GETS:D:Y:LTMSP:DVFGSQPEIPST:: hla1594 V::DVD:VGSKSLV::::VHD:::::::F:V:GED:E:NGIEFGDE::::::::::::SD Hut2245 A::::::::::::V:::::::::::::PIA:DP:::AV:::AVA:::::::::::::::: Hmu2952 ::::::::::::::::::V:ER:::::V:A:SE:::TL::L:::G::::::::::::::: rrnAC2629 ::::::::::::::::::Y::::::::GL:::G::S:V::Y::-TG:::::::::::::: NP5160A :::::::::::::S::::YGDG:::::L:A:GG-::::::Y:::G:D::::::::::::: HVO_0234 L::D:::::::::A:::::HRN:::::R:V::::S::V::::::ESG::::::::::::: Hbo1264 :::E:::::::::::::::::K:::::TL::G:EE::VG:::::-S:::::::::::::: consensus ---TDLGTVADVRAIDGDLVAAADGVYRIDGD---G--LAHVGLDDARDV------AGGD #oth 112572343462312.2333.122.12225431113222562.13314.12111113434 VNG2204 :TDRAVL:D:T:::L:A:::::T:::H:LTDA::::::::DA:::::Y::S::::::P:V HQ3649A :::NFID:CST:YE::MP:I:T:E::FQVTS:APS:TVISYA:::T:H:I::::::-DAE hla1594 PTA:SI:::S:P::V::P::::::::::VS::::::SE:VS:::::::::::::::::SG Hut2245 :::QH::S:DGA:::::AWL::D::::::GEG:::::::E:A::QT::::A::::::::A Hmu2952 :::VT::A:DEPH:V::::::::E:CF::::::::D:::VAL:G:AV::::::::::AAG rrnAC2629 :::QGI:E::::Q:::::RL:::E:::ALPS-:::-:::DRL::V:VA::::::::-S:: NP5160A :::EQ:S::EN:::::::FA:::G::::L::-:::-::-T:::::::Y::::::::V::A HVO_0234 :::::::A:GA:::L::S::::D::::::GDG:::::::S::::N:VT::SDPAGRL::: Hbo1264 :::::::RAEP::::::P::::::::H:VEA::::S::::P::::N:Y::::::::V:R: consensus ---PLAATADGLYRLG--NG-WME----ALAGAFRAVAAD------GDG-RAHAVGDGGL #oth 31123.1.54.23512111.1.3311112352336313241111114533411.143252 VNG2204 ::::H:::SE::FA::::::::R::::::AT::::T::::PASAAP:ATGV:::ATPEAC HQ3649A ::::V:::T::::V:A::::::IKIPSIEQ:ESVDIMRSS::::::DRLV:::::CG:S: hla1594 M::::::::A:V:W:::::::::T::::::E:DAT:::::::::::::::H:M::V::D: Hut2245 :::V:::::::IH:YV::D:E:TT::::ERSVDV::::S::::::::T-:::::::PD:: Hmu2952 ::::Y:G::::VD::A::D:::TT::::E:::DATV:S:E::::::R::D:::::V::D: rrnAC2629 :::-Y:::ES::::Y:GE::E:T:::::VRS:RHV:::S::::::::E-:QV::AAAD:: NP5160A E:::::::GS:::Y:A:::::::::::::AD:S:H:::GG::::::SST:A:::::::T: HVO_0234 SGT:::::DS:::A:::::::::D::::::D:::S:::SM::::::P:::::::::PD:V Hbo1264 ::::::::ET:::K:::::::::D::::V:N:::ET:T::::::::::::::::::G:H: consensus FA---RA-------SGA-WTAVD--LPVD-ERVVDVTYG-DATYAVTDAGTL--LVDLAG #oth 221115532222225241.5345115.4412422122134543222.34.1311324653 VNG2204 :E:::HR:::::::TD:::QPCRDIA:S:AA::::A::AV:T:ILL:A::::::I:VDGD HQ3649A Y:CNVSNTAGLVPDM::H:KS:N:::::T::PIMA::HSHTT:::::TD:::AAC::ITT hla1594 :V:::H:DDDTEWDA::::::A:::::::::VP:ALG::PGVSV::::::::::C::A-: Hut2245 YE:::YD:::::::-:T::GRRE::S:I:::PI:::G:A:GGIV:::::::I:::::P:A Hmu2952 ::::::::::::::::E::A:::::-:TV:SGI:::A:A:A::VT::AD::V::AI:PVT rrnAC2629 YE:::LT:::::::D:S::EPCT::::::::::::::H:::D:::I:EN::F::::AT:A NP5160A :E:::QNE:::::E---:::::E::::TE::S::::AH:::GA::::ET::V:::ATV-: HVO_0234 V:::::DE:::::E:::::E:AP::I:L:::S::ALAHDAR:A:::::::SF::C:R:T: Hbo1264 ::::::S::::::E::E:::PEP::V::A::G:AA::::PE::::::TP::F::::R:P: consensus ---------------GGWRHRSLGLPDVSGVAVA------ #oth 11111111223322352113131.1521413115343211 VNG2204 ::::::::::::::::DA:::::::::AAA:T:VGHTPDR HQ3649A ETAETTKKKPAHRREAE:Q:::::VTG::AI::SDNNW:: hla1594 :::::::::::::::D::::QVV:VRG:A:::L:VVE::: Hut2245 ::::::::::SKDGAE:::T:::::E::::L:::DQ:::: Hmu2952 ::::::::::AKDGAPE::S:A:::AG:T::::P:::::: rrnAC2629 ::::::::EATADGQ::::Q::::V:::V::::::::::: NP5160A :::::::::::::::D:::::A::::::::L::L:::::: HVO_0234 ::::::::::::::::D::TQV:::ET:-::::R:::::: Hbo1264 :::::::::::::::SE:::QM:::QG:TAA::V::::::