|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1525 | VNG1935 | HQ3149A | rrnAC3282 | Hbo1913 | NP2400A | hla1356 | HVO_2202 | Hmu2458 | Hut2003 |
912 | VNG1935 | 1566 | 632 | 632 | 768 | 758 | 665 | 794 | 783 | 714 |
881 | HQ3149A | 632 | 2353 | 797 | 889 | 747 | 740 | 682 | 785 | 713 |
1033 | rrnAC3282 | 632 | 797 | 1554 | 814 | 796 | 769 | 795 | 931 | 875 |
1132 | Hbo1913 | 768 | 889 | 814 | 1542 | 885 | 963 | 854 | 946 | 855 |
1040 | NP2400A | 758 | 747 | 796 | 885 | 1496 | 842 | 868 | 938 | 851 |
1074 | hla1356 | 665 | 740 | 769 | 963 | 842 | 1612 | 828 | 928 | 806 |
1098 | HVO_2202 | 794 | 682 | 795 | 854 | 868 | 828 | 1535 | 940 | 831 |
1241 | Hmu2458 | 783 | 785 | 931 | 946 | 938 | 928 | 940 | 1517 | 1032 |
1056 | Hut2003 | 714 | 713 | 875 | 855 | 851 | 806 | 831 | 1032 | 1529 |
326 symbols consensus MRVVVPFSGRDPKTRLAPVL-DADERRAFARAMLADVLDAVRAAGGEPTVL--------- #oth 14231.24444..1..24311223..23.143.15..45124332331422111111111 VNG1935 ::T::::DP::::S:::EFFA::E:::G::Y:::::::G:::D:::D:V:V::::::::: HQ3149A :H:I::YTDVS:::::NSI::T:S::T:::Q:::Y::ISTLQSN:HTVEL:IPTETVMQA rrnAC3282 ::LA::V::ST::::::S:::SP::::D:TE::::::V:::TS::H::E:I::::::::: Hbo1913 :Q::I:YTT::::S:::G::::E::::::::::RT::VR:::::::A::I:::::::::: NP2400A :D:L:::AA:E::::::GT:::::::A:::::::L::C:::E:::::::::::::::::: hla1356 :E:I::::TER::S::SA:::TP:::A::::T::Q:::A:ID::D:::RI:::::::::: HVO_2202 V::::::G::::::::::FF:::::::E::VS::R::::::::V::D:A:V::::::::: Hmu2458 ::::::::ATE::::::::::::::::::::V::::::::LDTV:VD::::::::::::: Hut2003 :H:::::D:::::::::::::::P:::D:::::::::AETIESISF:::I:::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 VNG1935 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ3149A TDQRDQETIIDSTGVSTEAVSTSTSTHADTTEHNAASDNYVSQSPTHTLSVTPEAIMRIL rrnAC3282 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo1913 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP2400A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla1356 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_2202 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu2458 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut2003 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus --------------------------ATAAVDI-D--APVTVDDRPLTPAVNAALA---- #oth 111111111111111111111111113144464243361.33.2.3.2421336131233 VNG1935 :::::::::::::::::::::::::::::P:SR:PVD::::::::A:ST::A::I::::: HQ3149A RDDDDPDNEASTQERDGDKEYIDITVD::QNQ:QSNQIV::A:::A::::::SC:N::RL rrnAC3282 ::::::::::::::::::::::::::S::PL:C:A::V:::::::G:D:L::DL:::STV Hbo1913 ::::::::::::::::::::::::::T:D:D::D:VD:::IG:::A:::::::V:D:::: NP2400A ::::::::::::::::::::::::::::EPLA::E::Q::V::K::::::ID:H:S:::: hla1356 ::::::::::::::::::::::::::::G::G:::LPS::EI::::::D:::::IDARLG HVO_2202 :::::::::::::::::::::::::::D:L:TV:::::::::::::::EV:GGE:D:::: Hmu2458 ::::::::::::::::::::::::::::E:I:L::::R:::::::::DA:I:GL:::::: Hut2003 ::::::::::::::::::::::::::::TD:EC:E::W::V::E:S:DA:::DQ:::::: consensus -DGDGP---VAVVMADLALATPDALRRLFAA--EGDVVLAPGRGGGTNAFVARHPDFRVD #oth 44565311131.....11.2.141131112411411112...2.....1312123313.1 VNG1935 :::PL::::T::::::::::::::I::V:::::S::::::::S:::::VVL::TA:VP:S HQ3149A S:TET:FSEL:::::::::I::T:IE::::R:::::I::::::::::::I:V:::A:::: rrnAC3282 T:DE:A:::L:::::::P:V:RESIE::L:P:::A:::::::L::::::::C:::E:::: Hbo1913 ::ATSD::::S::::::::V:::::::::ES::::E::I::::::::::L:V:::::::: NP2400A :---P::::A::::::V::V::A:::::::T::T::::I:::L::::::L:V:ADG:T:: hla1356 N::AER::::::::::::::::N:::E::::GR:AE:AI:::::::::::::G::A:::: HVO_2202 DL:G::::::::::::::::::A::S:::ET::DA:::A:::L::::::L:V:::E:S:: Hmu2458 :AS:E::::::::::::::::::::D:::::::::::::::::::::::::::::::::: Hut2003 :VA::::::::::::::::V:::::D:::R:::G:E::::::::::::::::::H::::: consensus YHGASIRDHRRIARDAGASVTEVDSMRLATDVDEPADLAEVLLHGE-----GRAADWLRD #oth ..12.32..352.3321433431..4..23.1.213..21112.341111113225..56 VNG1935 :::V:F:::VTA:ER::LT::T:::F:::A:::DAS::VD:FV:NT:::::R:TRE::IA HQ3149A :::T:Y:::YQA:T::SL::GV::::::G::I:K:T::P:::::NN::::::MSSV::QS rrnAC3282 ::::::::::ET:::V:::::::::R:::::I:::D::::::::SD::::::A:::::KQ Hbo1913 :::::Y:::QA::D:::L:::VI::::::::::::::::::::::A::::::N:RT::E: NP2400A :::T:V:::::A:EG::IDARS:::F:::V:I:::T:::::::::D:::::::S::::KN hla1356 :::::YL::::::DEI::G:RV:::H::::::::::::::L:I:A:ADGDG::::R:::: HVO_2202 ::::::L::::::::::C:FA::::::::V:::::S::V:::V:::::::::::RE::V: Hmu2458 ::D::::::::::::::GT:::I::Y::S::::::::::::::::::::::::::::::G Hut2003 ::D:::T:::S::EEI::DTV::::F:::S:::::D:::::::::::::::::::A:::E consensus AGFRLAVTD--GRVGVERER------ #oth 3.34.563311.12424.64321111 VNG1935 G:W::::D::::TPT:V::PND:::: HQ3149A ::IE:NLD:NT::::IT:K:KNEDVD rrnAC3282 S::E:TA:G:::::D:::F::::::: Hbo1913 :::E:E::::::::::T:SD:::::: NP2400A ::::::E::::::TT:::RG:::::: hla1356 :::A:DT:::::::::R::-:::::: HVO_2202 ::V:::RGS:::::EAV:::R::::: Hmu2458 ::VQ:T:A:::::TT:::P-:::::: Hut2003 H::D:SMDE:::::S:Q:--::::::