|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2025 | HQ1271A | hla0044 | VNG0251 | HVO_0675 | Hbo0860 | NP0844A | Hut0378 | rrnAC1672 | Hmu0646 |
1206 | HQ1271A | 2263 | 990 | 959 | 1079 | 1146 | 1007 | 1005 | 1041 | 987 |
1289 | hla0044 | 990 | 2292 | 1137 | 1107 | 1110 | 1161 | 1092 | 1100 | 1040 |
1356 | VNG0251 | 959 | 1137 | 2008 | 1223 | 1132 | 1141 | 1083 | 1179 | 1056 |
1546 | HVO_0675 | 1079 | 1107 | 1223 | 2051 | 1434 | 1250 | 1195 | 1274 | 1215 |
1487 | Hbo0860 | 1146 | 1110 | 1132 | 1434 | 2239 | 1202 | 1133 | 1200 | 1177 |
1506 | NP0844A | 1007 | 1161 | 1141 | 1250 | 1202 | 1995 | 1239 | 1271 | 1211 |
1477 | Hut0378 | 1005 | 1092 | 1083 | 1195 | 1133 | 1239 | 2131 | 1370 | 1313 |
1617 | rrnAC1672 | 1041 | 1100 | 1179 | 1274 | 1200 | 1271 | 1370 | 2035 | 1425 |
1505 | Hmu0646 | 987 | 1040 | 1056 | 1215 | 1177 | 1211 | 1313 | 1425 | 2031 |
340 symbols consensus ----MTDEATAFVPGHVTGFFSAHPD--DDPTAAGSRGAGLALSDGVTVTVERAD--ETG #oth 11233335.41.1...1.1..1224311131452....1.21134..3121433311554 HQ1271A MTTTA:R::EV:::::I:::::::HT:::::ATT:::::::TITT::KLE:C:GPTVSP: hla0044 :::MSRQR::::::::::A:::::SA::ER:V::::::::VT:T:::::R:SA:::::A: VNG0251 ::MSDGES:V::A:::::::::VDTGATEAAV:S::::::V:::A::::::T::E::N:: HVO_0675 :::::S:D:::::::::::::::::::::::AV::::::::T::H::S::::P:P::V:A Hbo0860 ::::::::::::::::I:::::::::::EN:EI:::::::V:::H::R:::R:V:::GNA NP0844A :::::::A::::::::I:::::::::::::::K:::::::V::DS::::RL:PG:::--: Hut0378 ::::::EK:S::::::::::::VVRT::::::TT::::G:I::::::R::::S:P::::T rrnAC1672 :::::S:::H::::::I::::TVDRG:::::IET::::G::::::::S:::S:GA::::K Hmu0646 :::::::::::::::::::::TTD:A::::::K:::::G::::A:::::::::S::::RS consensus V----------------------TLNGEPIEIEAVERVLDALGV-T-------AAVTAET #oth 21222222122222222222211211.4444242.34.232.3433111111125.6211 HQ1271A I::::::::::::::::::::::::::KS:S:D::DN:I:R:DIDD:::::::IN:N:Q: hla0044 ASGESGESDESVAPGQPAGSR:::ID:::GT:G:::D::A:::LAEDDGTPRVVD:AV:: VNG0251 :::::::::::::::::::::::V:::T:T::AS:RG:::::::::::::::::R::::: HVO_0675 I::::::::::::::::::::::::D::AV:MPP:VG::R::::::::::::::::D::S Hbo0860 :SNNHVATDDTRENTADDRPDEA::::DT:SMPP:DT:RRS:::PN::::::::E:K::: NP0844A :::::::::::::::::::::::E::::SAD::::D:::G::RA::::::::::R:VV:: Hut0378 :::::::::::::::::::::::::D:::VQ:::::::::::E::E:::::::::::G:: rrnAC1672 :::::::::::::::::::::::::::::::V::::::::::RT::::::::::T::::: Hmu0646 :::::::::::::::::::::::::D:VD:::::::::::::RA:::::::::V::R::: consensus PLPLGAGFGVSGAMALGTALAANAVFDR--GLSENELVTIAHGAEVQAGTGLGDVVAQAR #oth 3..211......131.12.222.3223411331221.123..4.1132.1.........1 HQ1271A A:::::::::::::T::V:FGS:::A:KTNTRA:SA:I:A::C:::R::::::::::::: hla0044 D::I:::::::::A:::A::S::DA::::::H:::::IR:::E:::GR:::::::::::: VNG0251 :::::::::::::T::AA:::::E::GC:::C::::::QV::V:DAE::::::::::::: HVO_0675 E:::::::::::::::::::::::::AC:::R:::::I:L::V:::R::::::::::::: Hbo0860 :::::S:::::::::::::Y:::::::A::EH:::::::V::R:::E::::::::::::: NP0844A D::VS:::::::GA:::::::::::::::::::::::::::::::::::::::::::::: Hut0378 D::I:::::::::::::::::::SA:::::R::RD::::::::::::::::::::::::A rrnAC1672 :::::S::::::GL::::::::::::GH:::::Y:::::::::::::S:S:::::::::: Hmu0646 :::::S:::::::T:::A::GT::LLE::::::::::::::::::::::::::::::::: consensus GGVPLRLEPGAPQHGYLDGIPARPRIEYVTFGELSTADVLGGDTDTLTAAGERALSTLVA #oth ..412.21..1.64162.11126421..322.211.2412322.53.13..351134134 HQ1271A ::F:I:V:::::HV:Q::::T:T::V::CS::TV::ES::NA::N:::T:::Q::E::QS hla0044 ::::I:::::::GV:E::::::DA:V::::::::::E:::::::AA:S::::D::DR:R: VNG0251 ::L:V:V:::::P::S:::V::SG:::::S::G:::S::I::E::A:S:::AD::AA:R: HVO_0675 ::M:::ID::::R:::M:::::::H:::::::G:::::II::::S:::::::A::DA:AE Hbo0860 ::L:I:::::::G::TM::V:EC::V::L::::V:::E::S:::T:::::::::::D:RE NP0844A ::F:V:::::::A::AM:::::VRD:::::::::::::::SDN::E:::::Q::::S::: Hut0378 ::IS::::::G:MENR::A:::QS::::::::::D::T:I:::::R::E::NEGV::V:G rrnAC1672 ::::::::::G::FN:::A::V:S::::::L::::::::V::::E::::::::::::V:K Hmu0646 ::::::::::G::DN:I:A::::G:V::HVI:::::EAI:D:::AA::R:::KG::RV:K consensus EPTVETFMAASRQFAREAGLLTPRVEEVIADVAAA-----GGDAAMAMLGETVFALGTGL #oth 3.23441272112.222.2.32361441132.3311111111311.....2...23142. HQ1271A T::AAQ::TLAH::GV::E:M::KAQ::::::QT::::::::T:::::::N::::::ND: hla0044 D:RLP:M:D:A:A::S::D::V:E:A:A::A:GDSPEKYDDHG:::::::R:::G::::: VNG0251 D:::AE:V::::R:::A:::VDAA:ADA::A:Q:::::::::E:::::::R::::::::: HVO_0675 :::::R:L:E::::::D:::::D:::TA::::RD:::::::::::::::::::::V:::: Hbo0860 R::ADR:LSL::::::::D:T:D:::S:::::R:::::::::::S::::::::::F::A: NP0844A ::::::::E:::R::::::::::P:::A:ES::D::::::D:E:S:::::::::::DG:: Hut0378 :::::Q::Y:::R:::::::::ET:RD::M::::::::::D:E:S::::::::::T:E:: rrnAC1672 ::KLS:::K:::::S:::D::::E:KG::D:::E:::::::::::::::::::::::::: Hmu0646 :::T:S:LR:::::::::::::DD:RS:LE::::::::::D::G::::::::::TV:S:: consensus SDAGYDAAVCAIHPAGATLVDE------------------ #oth 11....234142343.232655432212222222222211 HQ1271A :A::::PV::QT:SG:VSIQQQGNYQTGGQHNPRTIEHSS hla0044 ::::::PE::R:DA:::R::T:Q::::::::::::::::: VNG0251 ::::::::S::::HG::S:R--:::::::::::::::::: HVO_0675 ::::::TER:R:::::S::DSA:::::::::::::::::: Hbo0860 ::::::PE::DV::::SS::V::::::::::::::::::: NP0844A :A:::::TQ::VCLP::H:---:::::::::::::::::: Hut0378 :A::::P:::RVD:T::::::GRHAGTENSTLSSNASQ:: rrnAC1672 ::::::::I:::Y:P:::IE::R::::::::::::::::: Hmu0646 T::::::TITE:::G:::VL:SSD::::::::::::::::