|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2109 | HQ2568A | VNG1174 | NP2064A | Hut1101 | rrnAC0864 | Hmu1626 | HVO_1670 | Hbo3167 | hla2287 |
1326 | HQ2568A | 2136 | 1070 | 1144 | 1112 | 1166 | 1163 | 1193 | 1266 | 1116 |
1476 | VNG1174 | 1070 | 2091 | 1161 | 1224 | 1217 | 1262 | 1266 | 1336 | 1232 |
1497 | NP2064A | 1144 | 1161 | 2083 | 1266 | 1321 | 1338 | 1171 | 1283 | 1203 |
1562 | Hut1101 | 1112 | 1224 | 1266 | 2080 | 1373 | 1454 | 1228 | 1254 | 1305 |
1610 | rrnAC0864 | 1166 | 1217 | 1321 | 1373 | 2093 | 1531 | 1325 | 1276 | 1305 |
1660 | Hmu1626 | 1163 | 1262 | 1338 | 1454 | 1531 | 2089 | 1348 | 1328 | 1292 |
1582 | HVO_1670 | 1193 | 1266 | 1171 | 1228 | 1325 | 1348 | 2095 | 1446 | 1342 |
1641 | Hbo3167 | 1266 | 1336 | 1283 | 1254 | 1276 | 1328 | 1446 | 2129 | 1413 |
1599 | hla2287 | 1116 | 1232 | 1203 | 1305 | 1305 | 1292 | 1342 | 1413 | 2138 |
295 symbols consensus -MTD-------G-WFADIDPDDDEAAAAAIRDGEADEPADWPALAVESGFADDEDDYYDR #oth 1224124433411..315433.5332432144.4.33152..53..1314121433..34 HQ2568A ::SK:EQSDNPA:::S::::::ID:::T::TN:A:ED:QN::TQ::::EIVE:TTT::QL VNG1174 MT:H:::::::::::::TAVR:AD:::D:V:N:H::A:EN:::A:::D:VV::A:E:::: NP2064A :::::ERAVED::::::VP:G:V::::::::::S:ATVGE::S::::::V:A::::::EQ Hut1101 MN:E::::::::A::H:VSAG::ST:Q:R:::::::D:::::G::::T:Y:::V:A:::A rrnAC0864 ::SN::::::::::::GL:::::A::VEQ:EA:R::T:E:::QQ:::A::::::AA:::: Hmu1626 ::::::::::::::::GL::::::::V::::E:S:::::E::R:::DA:::::T:::::: HVO_1670 :::::::::::A::::GA::::P:PG:TRV:T:S:SA:T::::E::DA:::A::S:::AK Hbo3167 ::N:GTAPTGT::::E::A:::A:S:SE::A:::::::R::::::::::H::S::E:::Q hla2287 ::::::TDDNA:::::G----:ES:LR:R:V:::::::R:::G:::::::::SR:::::: consensus LHEATLAATRAAVRERERADDQQLVHAVRAMDDCERTANELAERVAEWAGSRYDDAGSGV #oth .133251.134..413.31..3..4.111212.4112...11..22..1221533335.2 HQ2568A ::D:AIT::QN::ESY:AS::R::R:CLT::::V:::::::T::LT::G:::I::SDT:: VNG1174 :RD::R:::::::::::::::::::::::TIG:LSDA:::V:::AV:::RTLF:GVDD:I NP2064A ::::AV:::::::H:A:T::::::I::::::::T::V::::::::T::::D:::AD:T:: Hut1101 ::SI:T::AET:::::::::::::K:::::::::::::::::::::::::T:LA:::::: rrnAC0864 :::V:M:::S:::A:Q:G:::::::::::::A::::::::::::::::G:::HG:S:::: Hmu1626 :RA::M::AEQ::Q:::G:::R:::::::S:A::::::::::::::::GE::SA:::::: HVO_1670 :RS:::::ASE::A:::::::V::A::::::::A:::::::::::V::::TL:EEVPR:L Hbo3167 :R::::T::::::::::::::K:::::::::::A::::::::::L:::::TL:::::V:I hla2287 :::TSV::::E:::::::::::::::::::::::::::::::::A::::::LF:::EP:I consensus EGARDLADREPSDPAEERLVSLAERVVDLADERDDLRAFIERTAPAVAPNLAALAGPVLA #oth 4211321453363452532411141342.32.114225311351133....231..11.. HQ2568A DTV:E:::IT::T:V:T::T:::TQ:LM:YE::::::TY::TQ:AT:::::T:M:::::: VNG1174 A::::V:G:SANS:T:::AIA:C::AT:::::::RAQG:V:TH::T:::::SM::::::: NP2064A :Y:AS:::ADDL:--DPQ:R:::::IR:::A:A::::SHV::VT:EI:::::R::::::: Hut1101 GY::E:VTG:T::R:DAD:::::Q:::A:D::AAE::RT::T:::D:::::S:::::::: rrnAC0864 :Y::S:::::DE:EGDRA:R::::QTAA::::A:SI::Y::::::::::::SM::::::: Hmu1626 :Y::E::AS::::::G::VQ:::Q:::::DE:A:R:::Y:D::::E:::::::::::::: HVO_1670 N:V::I:V:::KTA::::V::Y:T:A:::L:::::::::::ER::TT:::::EM:::::: Hbo3167 ::::::::KD:QT:V:D:V::Y:R::A::::::::::::V:SR:::L:::::EM:::::: hla2287 ::::AV:::::TGEL:R:A::::A::::::A:::A:AET:D:I:::::::::EM::AE:: consensus ARLIALAGGLEPLAKKPSGTVQVLGAEDALFAHLRGRAPSPKHGVIYTHEYVRGTHPEDR #oth 1..12.....25..13.1..2......1......4.2121....2.11..1121.3123. HQ2568A T:::E:::::KS::RQ:A::I:::::::::::::E:::SA::::A:F::::::::::AN: VNG1174 ::::::::::DD:::L::::::::::::::::::::H::::::::::::::::::::DQ: NP2064A ::::::::::KQ::R::A:::::::::E::::::::::::::::::::::AIQ::A:AH: Hut1101 ::::S:::::::::::::::::::::::::::::Q:S:::::::I:::::::S::V:AQ: rrnAC0864 ::::S::::::A::::::::::::::::::::::K:S:::::::::F::::::::RR::: Hmu1626 :::VS::::::S::::::::L:::::::::::::::S:::::::I:F:::A::::::DH: HVO_1670 ::::::::::::::::::::::::::::::::::K:::T:::::::F::::::::R:::: Hbo3167 :::::::::::R:::M::::::::::::::::::E::GS::::::::V::::::::::H: hla2287 ::::::::::::::::::::L:::::::::::::S:::::::::I::::::::N:R:::: consensus GSAARALAGKLTIAARIDHYSGDRRPDLHAELDDRIETIRARA--G------DDE #oth ...1..1....21...1.....242331331.32.112.11.4422111111331 HQ2568A ::::::F::::A::::::::::THKQSI:D::T:::::::::NKE-:::::::TA VNG1174 ::::::::::::::::V:::::::::::E::::A:M:R::::-::-::::::ET: NP2064A ::::::::::::::::::::::E:N:E:E:D:R::::R:Q::-::-:::::::A: Hut1101 ::::::::::::::::::::::::::E:D:::::::::::S:-:::::::::EGA rrnAC0864 ::::::F::::S::::::::::::::::QV:::E:::R:Q:::EE:::::::::: Hmu1626 :::::::::::::::::::::::L::::Q::::E:::A:QS:TG:::::::::G: HVO_1670 :::::::::::A::::V::::::Y::::::::A::M:::::::DE:::::::G:: Hbo3167 ::::::F::::A::::::::::EFKSEI:E::AE:M::::::E::-::::::VA: hla2287 :::S::::::::L:::V:::::E::ET::E::RE:MA::::::KDESDAAAEG:A