|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1573 | VNG1027 | NP2182A | rrnAC0537 | Hmu1493 | HQ3360A | Hut1049 | hla2618 | HVO_1300 | Hbo0242 |
1264 | VNG1027 | 1570 | 1161 | 1171 | 1233 | 1073 | 1139 | 1215 | 1140 | 1122 |
1227 | NP2182A | 1161 | 1560 | 1253 | 1244 | 1079 | 1158 | 1131 | 1138 | 1141 |
1330 | rrnAC0537 | 1171 | 1253 | 1566 | 1374 | 1132 | 1191 | 1174 | 1198 | 1163 |
1327 | Hmu1493 | 1233 | 1244 | 1374 | 1635 | 1110 | 1182 | 1212 | 1199 | 1186 |
1266 | HQ3360A | 1073 | 1079 | 1132 | 1110 | 1565 | 1190 | 1194 | 1230 | 1238 |
1380 | Hut1049 | 1139 | 1158 | 1191 | 1182 | 1190 | 1578 | 1213 | 1309 | 1301 |
1355 | hla2618 | 1215 | 1131 | 1174 | 1212 | 1194 | 1213 | 1655 | 1329 | 1268 |
1388 | HVO_1300 | 1140 | 1138 | 1198 | 1199 | 1230 | 1309 | 1329 | 1564 | 1383 |
1376 | Hbo0242 | 1122 | 1141 | 1163 | 1186 | 1238 | 1301 | 1268 | 1383 | 1577 |
228 symbols consensus ------------MFVLVNLKAYPCDPVEVATAAADVADESGVRIAVAPQAADIARVADTG #oth 1112212222221.111...1.....211.3..31.123111111.11.2.2241.11.. VNG1027 :::::::::::::::::::::::::::AI:E::::::ETTPAT::::::P:::G:::::: NP2182A :::::::::::::::V:::::::::::A::E::::::::T:::::::::::::S:::E:: rrnAC0537 ::::::::::::::::::::::::::::::::::::S:D::::V:::::::Q:SA::E:: Hmu1493 :::MIPASGGLC::::::::::::::I:::::::::S::T:::V:::::::HLDA::E:: HQ3360A ::::::::::::::I:I:::::::::L:I:N::R:::ND:::::::S:::::::::S::: Hut1049 ::::::::::::::::::::T:::::::::K::K::S:::::::G::A:D:::::::::: hla2618 MKLFAPRTPSVG::I:::::::::::I::::::R:::EA::A::::S::::::::::::: HVO_1300 ::::::::::::V:I:::::::::::I::::::R:::EA:::::::S::::::S:::::: Hbo0242 ::::::::::::V:I:::::::::::L::::::HE::E::::::::::::::VR:::::: consensus VETWAQHVSPNEHGSHTGSTLAEAVADAGAVGTLINHSENRLKLADIDGSVDAAERAGLE #oth 11.1....12341..2..11...21121..3...1....3.12.....1216..3.22.1 VNG1027 AT:Y::::::T::::::::V:::S:::N::::::L::::H:RR::::::::A:::::::D NP2182A ::::::::DAVD::::::::::::A:E:::E:::L::::K::R::::::GLR::::V::: rrnAC0537 :::::::::AV:::::::::::::A:::::::::L::::::::::::::AL:::D::D:: Hmu1493 ::::::::::V:::::::::::::AV::::T:::L:::::::::::::::L:::D::D:: HQ3360A :::::::::A:NY::Y::::::::::N:::T::::::::R::T:::::TA:N::S:VD:D Hut1049 ::::::::DSI:Y::N::H::::T:::::::::::::::::::::::::::E:::::::: hla2618 :::::::::::A:::::::::::::::N::E::::::::::::::::::::H::::TE:: HVO_1300 ::::::::D::G::::::::::::::E::::::::::::K:::::::::::Q:::::::: Hbo0242 ::::::::D::GY:::::::::::::E:::D::::::::K:::::::::::Q::A::::: consensus TCVCANNPAQIGAAAALGPDAVAVEPPELIGGDTSVSTADPDIVTDAVEAAAAVDEDVDV #oth 12......2.11.12..3..2......1...1131.121..21.321.311331233.1. VNG1027 :V::::::::VA:::::::::::::::A:::TG:P::Q::::::S:::A::E:::PS::: NP2182A SI::::::R::A:::::E:::::::::A:::TG:P::Q:::EV:::S::::D::-G:::: rrnAC0537 :I:::::::::::::::D::G::::::::::TG:P::K:::::::G::D:::R:NG:::: Hmu1493 :I::::::E::A:::::::::::::::A:::TG:P::K:::E::::::S:::S:::S::: HQ3360A :::::::::::::VT::S::S::::::A:::::A::A:::::::SN:::STNSI:KT::: Hut1049 :::::::::::::VT:::::S::::::::::::V::A:G::::::::::::E::::::E: hla2618 :I::::::::V::::::::::::::::::::::V:::::::G::E:::A::E:::PA::: HVO_1300 :::::::::::::VS:::::S::::::::::::V::A::::G::::::D:::N:::::E: Hbo0242 :::::::::::::V::::::S::::::::::::D::A:::::::R:::::::N:::S:E: consensus YCGAGISTGDDVVAAGDLGASGVLLASGVAKADDPRAALEDLVEPL-- #oth 2....112.1.132.41...3.1..........2.111.2...31131 VNG1027 ::::::T::E:::S:::::::::::::::::::::::::A:::A:::: NP2182A L::::::::::LE::AE:::E::::::::::::A:K:::R:::::IAE rrnAC0537 L::::::::E:L:S:S::::::::::::::::::::::::::::::L: Hmu1493 L::::::::E:::S::E::::::::::::::::::::::::::A::E: HQ3360A :::::::A::::I::R::::::I::::::::::N::K::::::V:I:: Hut1049 ::::::::::::ES::E:::T:::::::::::::::::::::::::A: hla2618 F::::V::::::::::::::A::::::::::::::K:V:::::SGI:: HVO_1300 :::::::::::::T:EE:::::I::::::::::::::::::::SG::: Hbo0242 F::::::S::::D:::::::T:I:::::::::::::::::::::::::