|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1915 | HQ2853A | VNG1766 | Hut0234 | rrnAC1923 | NP4756A | hla1105 | Hmu2169 | HVO_2298 | Hbo1983 |
1254 | HQ2853A | 1926 | 1001 | 1074 | 1045 | 1141 | 1133 | 1128 | 1076 | 1115 |
1283 | VNG1766 | 1001 | 1911 | 1121 | 1098 | 1183 | 1103 | 1064 | 1143 | 1129 |
1450 | Hut0234 | 1074 | 1121 | 1932 | 1250 | 1199 | 1149 | 1231 | 1146 | 1218 |
1382 | rrnAC1923 | 1045 | 1098 | 1250 | 1910 | 1151 | 1106 | 1288 | 1152 | 1261 |
1490 | NP4756A | 1141 | 1183 | 1199 | 1151 | 1939 | 1199 | 1263 | 1215 | 1307 |
1421 | hla1105 | 1133 | 1103 | 1149 | 1106 | 1199 | 1963 | 1256 | 1284 | 1323 |
1515 | Hmu2169 | 1128 | 1064 | 1231 | 1288 | 1263 | 1256 | 1907 | 1191 | 1350 |
1413 | HVO_2298 | 1076 | 1143 | 1146 | 1152 | 1215 | 1284 | 1191 | 1897 | 1354 |
1513 | Hbo1983 | 1115 | 1129 | 1218 | 1261 | 1307 | 1323 | 1350 | 1354 | 1918 |
265 symbols consensus --MDLQDLCARLDDRLDTAAYADVDASANGLQVGPDSREVERVAFAVDAAEATIDAAAEA #oth 11.3542444.2112.33311.23..14.....1354451131.1...1141.124.413 HQ2853A :::EE:TFIT:::::::::::::::::M::::::TTNGHINT::V:::::M::::I:I:R VNG1766 ::::VS:VTS:YN:::RVTD::--::AT:::::::GD:S:::I:::::::A:::SD:V:W Hut0234 ::::C:E::S:F:::::V::::GI:::E:::::::EE:D:::::::::::VE::EG:::: rrnAC1923 :::NAG:IA::::::::IE::::I:::P:::::::A:QP::H::::::::VE:::R:D:V NP4756A :::Q:ET::S::::::NHDD::::::::::::::D:D:T:::::V:::GV:::V:::::: hla1105 :::ERSEYVR::::::::::::::::::::::::S:RG:I::::::::::D:::E:::D: Hmu2169 ::::::T:TD:::E:::::::::L:::P:::::ETR:T:I:H::V::::::::VE:::D: HVO_2298 :::Q:S:IV::::ET:A:DDF::::::::::::::GEKS::K:::::::::::::::LD: Hbo1983 MT::RA:VI::Y:EK:A:D:::::::::::::::SE:GT::H::::::::::::E::V:: consensus GADLLVVHHGLVWGGLDRVTGREYDRIAPLIDNDLALYVSHLPLDGHQELGNAAGVADLL #oth 11.1.11...34...3211.1351212131433243..12.......23.....11.261 HQ2853A DV:::LT::::S:::I::::::::AQ:ES:MSA:ID:::::::::::CQ::::::L::YI VNG1766 ::::::::::VA:::::A::::::::::A:V:GEC:::AA:::::::P::::::H:::V: Hut0234 :::::::::::L:::DG:::DLR:R::ER:L:A:M:::AV::::::::D::::::L::V: rrnAC1923 ::::::T:::I::::ME::::TN:R:V::::::::::::A::::::::S::::::::::: NP4756A ::::::::::F:::::::::::::::::AC:E::VP:::::::::::P:::::::L:EF: hla1105 D::V::::::IS:::I::::D:T:::V:A:A:H::::::::::::::PD::::::::AE: Hmu2169 ::::::T:::I::::ME:L::TH:R:M::::EHG:G:::::::::::P:::::::::::: HVO_2298 D:::::::::::::::::::::DF:::E::VRG:::::::::::::::::::::::::H: Hbo1983 ::::::T::::I:::::::::Q::::::::VE::IG::::::::::::S:::::::::Q: consensus DL--DDREPFGEIGGETIGQRGQADDPYTAEELRESL-DEL------DTGGQPVQVLDFG #oth 211145131..352223..33152551522551344.244111111133334211.111. HQ2853A ::NP:S:TA:::L:SV:::C::YL::SVAT:TIQSR::ET:::::::H:DD:S::::P:: VNG1766 G:::TQ:S:::DHS::Q::LQ::LP::TS:PA:SK::AAA:::::::P::D:::::::V: Hut0234 ::::GN:A:::::D::Y:::::R:RE:F:VG::::L:SS::::::::::::ES::::::: rrnAC1923 ::::NN:A:::AM:::Y:::::TLSE:Q:VS::AG:::EG:::::::::::::::::::: NP4756A :C::TVT::::DY::V::::QA::ET:::VAT:::R::GD:::::::::::::::::::: hla1105 G::::::::::D::PV:::TI:E::A:RS:AS:::T:::GFEGQPDGEDEES:T::I::: Hmu2169 E::::::A::::V:P:Y:::::R:ASS::::D::S::A:::::::::::A:::::::::: HVO_2298 G:::G:T::::SL:PIH:::A:SFES:Q::D:I:AA::::::::::::-:SAGTT::::: Hbo1983 E:::EA::::::M:PVH:::::::SQ::SV:K:::A::::F:::::::N::T:T:::::: consensus PDEIEDIAIVTGSGTDWLDEAAAAGVDALVTGEGKQKVYHEAREAGLSVFLAGHYATETF #oth .32243111.....3..14..32511.111.....1131.2...3.33.1.........2 HQ2853A ::S::S::::::::A::::::::TD:::FI:::::::I::::::L:VT:::::::::::: VNG1766 :A:LT:V:V:::::A:::R::E:N:::::::::::G:L::::::::V::::::::::::G Hut0234 ::::R:V:V::::::::I:::::KD:::::::::::Q:::R:::H:IH:::::::::::: rrnAC1923 :STV::V:::::::V:::Q::VE:DA:V:I::::::QAF:::::Q:MH:V:::::::::: NP4756A :ET::::::::::::::IR::E:::::::::::::::A::::::::I::::::::::::: hla1105 ::::QR::V::::::::::::VD::A:::::::::GQ:::D::::::T:::::::::::: Hmu2169 ::::::::::::::S::IG:::E::::::::::::::A:::::::::T:V:::::::::V HVO_2298 ::::SSVGV:::::V::::::IDR::::::::::::::::::::::V::::::::::::: Hbo1983 ::::SE::::::::V:::S::E:V:A::::::::::Q::::::::::N:::::::::::: consensus GVRSLAALAEEWGLETTYVDHPTGL #oth ..1423434221111.21232..1. HQ2853A :::HV:EII:S::V:::FIN::::: VNG1766 :::A:E:V:DD::V::RFIS::::: Hut0234 :::A::G:::::D::::F:E:::S: rrnAC1923 ::Q::QTVV:DL::::::I:C:::: NP4756A :::RI:EPI::::::::FL:::::: hla1105 :::::Q::T::::::::::S::::: Hmu2169 ::::::::L:::::T:::::::::: HVO_2298 :::::RD::D::::::E::S::::: Hbo1983 :::N:::::Q::::::::L:F::::