|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2255 | rrnAC1732 | NP4528A | HQ3323A | hla1046 | HVO_2336 | Hbo2018 | VNG1793 | Hut0742 | Hmu2215 |
1941 | rrnAC1732 | 2256 | 2036 | 1838 | 1783 | 1755 | 1828 | 1864 | 1844 | 1874 |
1933 | NP4528A | 2036 | 2248 | 1810 | 1790 | 1754 | 1820 | 1874 | 1838 | 1889 |
1998 | HQ3323A | 1838 | 1810 | 2267 | 1871 | 1846 | 1923 | 1872 | 1879 | 1910 |
1949 | hla1046 | 1783 | 1790 | 1871 | 2275 | 1939 | 1923 | 1822 | 1861 | 1880 |
1942 | HVO_2336 | 1755 | 1754 | 1846 | 1939 | 2262 | 2008 | 1772 | 1859 | 1840 |
2058 | Hbo2018 | 1828 | 1820 | 1923 | 1923 | 2008 | 2266 | 1855 | 1956 | 1951 |
2022 | VNG1793 | 1864 | 1874 | 1872 | 1822 | 1772 | 1855 | 2272 | 1931 | 1993 |
2064 | Hut0742 | 1844 | 1838 | 1879 | 1861 | 1859 | 1956 | 1931 | 2253 | 2015 |
2108 | Hmu2215 | 1874 | 1889 | 1910 | 1880 | 1840 | 1951 | 1993 | 2015 | 2257 |
302 symbols consensus MMEETDLEELRRGTELVKRGFAKMQKGGVIMDVVNREQARIAEDAGAVAVMALEAVPADI #oth 1424...11.1..11.......2...........32...1...12......2..1..... rrnAC1732 :T::::::D:::::D::::::::::::::::::::::::::::::::::::H::S::::: NP4528A -:SN::::::::::D:::::::::::::::::::T::::::::::::::::H::S::::: HQ3323A :S:K:::S::::::::::::::R:::::::::::DA::::::::::::::::::S::::: hla1046 :P:A::::::K:::D:::::::R:::::::::::T:::::::::T::::::::::::::: HVO_2336 :P::::::::::::::::::::Q::::::::::::A:::K:::E:::::::::::::::: Hbo2018 :P::::::::::::::::::::Q:::::::::::DA:::::::E:::::::::::::::: VNG1793 :AT::::::::::S::::::::::::::::::::::::::::::V::::::N:::::::: Hut0742 -:T:::::D:::::D:::::::::::::::::::SP:::::::::::::::::::::::: Hmu2215 -:SD::::::K:::::::::::::::::::::::D:::::::::V::::::N:::::::: consensus RKRGGVARMADPASLTEIIDEVSIPVMGKSRIGHTKEAQILEAIGVDMIDESEVLTPADD #oth ......1..1..462431.11....1...1....22..1..114.1..1.......2..1 rrnAC1732 ::::::::::::SK:E:::E:::::::::A:::::A:::::::A:A::V:::::::Q::: NP4528A ::::::::::::GG:EDV:::::::::::A:::::A:::::::T:A::::::::::Q::: HQ3323A :::::::::P::DIVP:::::::::A::::::::::::E:::SL:::::::::::::::: hla1046 :::::::::P::ENV:::::::::::::::::::R:::E:::SL:::::::::::::::: HVO_2336 ::::::S:::::ETV:::::A::::::::A::::HT::::::S::::::::::::::::N Hbo2018 ::::::S:::::ETVK::::A::::::::A::::HT::::::S:::::::::::::M::: VNG1793 ::::::::::::::::G::E::::::::::::::R:::E::Q:V:A:::::::::::::: Hut0742 :::::::::::::DIQ::::::::::::::::::::::::::::::::V::::::::::: Hmu2215 ::::::S::::::::QA::::::::::::::::::::::::::A:A::V::::::::::: consensus RYHIDKREFTAPFVCGARNLGEALRRIDEGAAMIRTKGEAGTGDVNQAVHHQRNIKGSIR #oth 3..1...2.12.......1.3......2.....................2...2.142.1 rrnAC1732 ::::::::::::::::::::A::::::::::::::::::::::::::::T:::::QR::G NP4528A :::::::::::::::::::::::::::::::::::::::::::::::::T:::::QR::: HQ3323A :::::::H::::::::::::Q:::::::::::::::::::::::::::::::::::S::: hla1046 E::T:::D:AS:::::::D:P::::::R:::::::::::::::::::::K:::T::TQ:: HVO_2336 D:::::::::S:::::::::P::::::N:::::::::::::::::::::T:::T::HQ:: Hbo2018 :::::::D:::::::::::::::::::N:::::::::::::::::::::::::::::::: VNG1793 E:::::::::::::::::::::::::::::::::::::::::::::::::::::::SA:: Hut0742 A::::::D::T::::::::::::::::::::::::::::::::::::::::::T:::A:: Hmu2215 :::::::::::::::::::::::::::::::::::::::::::::::::::::S:::A:: consensus KLEGMSYEEREKWAREHEAPAELVHETAEMGRLPVVNFAAGGIATPADAALMMHHGCDGI #oth 4.5.2422..14...1.1..12......12.......................211.... rrnAC1732 :::::A::::DE:::::G::RR::::::DR:::::::::::::::::::::::Q:::::: NP4528A ::S::D::::DE:::::G::R::::::::::::::::::::::::::::::::QL::::: HQ3323A E:V:K::::::R:::D:::::::::::::::::::::::::::::::::::::::::::: hla1046 T:T:LNH::::::::::G::RD:::::::A:::::::::::::::::::::::Y:::::: HVO_2336 S:T:LNFD:::::::::::::::::::::::::::::::::::::::::::::Y:E:::: Hbo2018 ::Q::THQ:::::::::::::::::::::::::::::::::::::::::::::::E:::: VNG1793 :::::D::::DM:::D::::R::::::::::::::::::::::::::::::::::::::: Hut0742 Q:::::H::::A:::::::::::::::::::::::::::::::::::::::::::E:::: Hmu2215 Q:D::::::::::::::::::D:::::::::::::::::::::::::::::::::::::: consensus FVGSGIFGAEDPEAMGRAIVEAVNNWDDPERLAEIASGIGKGMKGQANADLPEEEKLQGR #oth .....1...11.21..311.2....2.1.13.12..232.3..1.22.321312121.2. rrnAC1732 ::::::::::N:Q:::ESV:A::::Y::::Q:K:::KNP::::::::::::D:::Q:::: NP4528A ::::::::::N:Q:::E:V:A::::Y::::T:K:::KSP:::::::::ET::::::::D: HQ3323A :::::V::::N:R::::::::::::::::DE::Q:::NP::::::E:::::S:G::::T: hla1046 ::::::::::::::::T::::::::::::DE::D::::::::::::S:E:::D::::::: HVO_2336 :::::::::::::R::E::::::::::::DT::D::A::::::::E::VGMAD:D::::: Hbo2018 ::::::::::::::::K::::::::::N:DQ:::::::::::::::S:Q:M::::::::: VNG1793 ::::::::::N:::::::V:D::::H:::::::::::N::E::Q:DP::::::D:RM:D: Hut0742 :::::::::A:::::::::::::::Y::::::::::A:T:S::::D::V::::D:Q:::: Hmu2215 ::::::::::::::::T::::::::::::::::::::D::G::::D::::::::::M::: consensus GV #oth .2 rrnAC1732 :: NP4528A :I HQ3323A :: hla1046 :: HVO_2336 :: Hbo2018 :: VNG1793 :N Hut0742 :: Hmu2215 ::