|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1349 | VNG2227 | hla0632 | HVO_0134 | Hbo1362 | HQ3051A | NP1006A | Hut1973 | rrnAC2479 | Hmu3161 |
1062 | VNG2227 | 1366 | 845 | 956 | 890 | 901 | 963 | 979 | 990 | 990 |
948 | hla0632 | 845 | 1324 | 926 | 987 | 932 | 860 | 853 | 858 | 866 |
1153 | HVO_0134 | 956 | 926 | 1341 | 1111 | 1093 | 1000 | 1008 | 1041 | 1040 |
1095 | Hbo1362 | 890 | 987 | 1111 | 1335 | 1179 | 947 | 941 | 973 | 984 |
1082 | HQ3051A | 901 | 932 | 1093 | 1179 | 1334 | 937 | 954 | 951 | 980 |
1141 | NP1006A | 963 | 860 | 1000 | 947 | 937 | 1378 | 1088 | 1099 | 1068 |
1162 | Hut1973 | 979 | 853 | 1008 | 941 | 954 | 1088 | 1355 | 1136 | 1149 |
1166 | rrnAC2479 | 990 | 858 | 1041 | 973 | 951 | 1099 | 1136 | 1355 | 1209 |
1152 | Hmu3161 | 990 | 866 | 1040 | 984 | 980 | 1068 | 1149 | 1209 | 1360 |
188 symbols consensus MQHVKIPQDRIGVLIGEGGETMREIEQRAEVRLDIDSESGSVAIESVGDPVLGLKAPDIV #oth .1..11.2.....1..2..1.1.2..53.1.1111..13.2.311321..131131.111 VNG2227 :K:::::T::::::::D::::L:R::AA:::DI:V::QD:A::::RT::::R:MQ::E:: hla0632 ::::TV:::::::V::A:::::::::E::N:::::::::::::::ELD:::AA:V::::I HVO_0134 :::::V:::::::::::::S:L::::S:::::::V:::N:::::D::::::::MV:::V: Hbo1362 :::::V::::::::::::::::::::R::::::::::::::::::E:::::T:MV:::VI HQ3051A :K:::V:::::::::::::::::::::Q:::::N::::T:::::DD:::::R:ML::::: NP1006A :K::T::E:::::::::::::::K::SE::::::::::T:::RV::::::I::::G:::: Hut1973 :::::::::::::V:::::::::::::E::::::::::T:A::V:::::::::::G:::: rrnAC2479 ::::::::::::::::::::::::::E:::::::::::D:T:KV:::::::TA::G:::: Hmu3161 ::::::::::::::::::::::::::D:::::::::::::::GV::::::IT:::G:::: consensus KAIGRGFAPEAALALLDDDMRMFELIDIDAATRNKNDLRRQKGRLIGENGRTRELMEELT #oth 2.1....4.23.131.1211231131.14322..31.23.2...1...2......121.1 VNG2227 Q::::::K:DE::T:::::::::DT:::GR:A::D:::::K::::::::::::::::::: hla0632 :::::::K::T::SI::H:L:TLD:::LSEH:::D:::Q:K:::I::::::::::I:::S HVO_0134 R:V:::::::D:M:::::::M::::::::RH::::::M:::::::::::::::::::::: Hbo1362 R:V::::T:::::S::::E::A:::::LQQH:::::::Q::::::::::::::::::::: HQ3051A R::::::T:T:::SI:::E::T:::::L::H:::::::Q::::::::::::::::::::: NP1006A ::::::::::E::R::E:::QL::IV:::::::::K::::K:::::::S:::::::A::S Hut1973 :::::::S:::::R:::G::M::DV:::::VA::P:::K:L::::::::::::::::D:: rrnAC2479 :::::::::DD:::::E:::M:::::::E::S:::::F::::::::::G:::::::Q::S Hmu3161 :::::::N::D:::::::E:M::DVV:::::S::Q::FT:::::::::G::::::::::: consensus GADVVIYGSTLGIIGQPEEVDAVRRAAEMILDGAPHGAVYSFLERKHN-ELKTQGLEYHQ #oth ..4..11.1.2121.2.111111.2.21.1.1.....2..11...2211.1244143333 VNG2227 ::S:::::::F:V::::S:::VA:S::::L:::::::S::::::::RSE:::Q::M:::E hla0632 ::N::V::::V:AV:::::LEV::::VG:L:::::::::::Y:::MS::::-DDDVSFNA HVO_0134 ::::::::T:::::::::::EV::::V::::::::::::::::::::::::-:::FNVR: Hbo1362 ::E:::R:T:::::::::::E:::::TG:::::::::::::::::::::::-:RDFDIQP HQ3051A ::E:::R:T:::V:::::::E:::::TG:L:::::::T::A::::::::::-:R:FNVQ: NP1006A :::::::::::::::A::Q:::::S::::::::::::::::::::R::::MQSNDI:::: Hut1973 :::::::::::S:::G::Q:::::E::::::E:::::S:::::::R::::M:H::::::: rrnAC2479 ::A::::::::::::G::Q:::::E::::::::::::S::::::::::::M:HK:::::: Hmu3161 ::S::::::::::::G::Q:::::E::::L:E:::::S::::::::::::M:QK::N::: consensus FPG----- #oth 36211111 VNG2227 :::::::: hla0632 PQ-::::: HVO_0134 NN-::::: Hbo1362 SD-::::: HQ3051A SG-::::: NP1006A ::DGSRSA Hut1973 :T:::::: rrnAC2479 :T:::::: Hmu3161 :H::::::