Home |  Text search
[L] (GyrA) COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
9 genomes BUD0342 9 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG0889

rrnAC0455

HVO_1573

Hbo3474

Hmu1129

Hut0820

hla2339

NP3500A

HQ2651A

Pairwise sequence scores
Consensus score6144 NP3500A VNG0889 Hut0820 rrnAC0455 Hmu1129 hla2339 HQ2651A HVO_1573 Hbo3474
4762NP3500A 6135 4319 4428 4307 4458 4220 4191 4324 4369
4725VNG0889 4319 6112 4440 4280 4488 4339 4103 4263 4431
5137Hut0820 4428 4440 6149 4802 4927 4518 4257 4562 4541
5086rrnAC0455 4307 4280 4802 6095 5088 4433 4214 4480 4442
5161Hmu1129 4458 4488 4927 5088 6114 4501 4226 4426 4438
5103hla2339 4220 4339 4518 4433 4501 6155 4537 4780 4756
4894HQ2651A 4191 4103 4257 4214 4226 4537 6403 4706 5035
5184HVO_1573 4324 4263 4562 4480 4426 4780 4706 6434 5179
5261Hbo3474 4369 4431 4541 4442 4438 4756 5035 5179 6450

876 symbols
consensus       MSSDAPD--PDDPG-AARVENVRIEDEMEQSYIDYAMSVIAGRALPDVRDGLKPVHRRIL
#oth            ...121172454333.321441.113..............1......1.......1....
NP3500A         ::::V::T:::V:-::EEI:P:::::::::::::::::::V::::::A:::::::Q::::
VNG0889         :::ES::V::::V-::D::K:::VDE::::::::::::::::::::::::::::::::::
Hut0820         ::::V:EG::GVTAD:::::H:::::::::::::::::::::::::::::::::::::::
rrnAC0455       :::::N:::ANA:-::E:I:H:::::::::::::::::::::::::::::::::::::::
Hmu1129         :::E:::::::::QA:S::DR:::::::::::::::::::::::::::::::::::::::
hla2339         ::::V::AD:S:V::::Q:T:A::::::::::::::::::::::::::::::::::::::
HQ2651A         ::::::ERFDPET:I::E::TA:::R:::::::::::::::::::::A::::::::::::
HVO_1573        :::::::SFEPGA:I::E:K:A::::::::::::::::::::::::::::::::::::::
Hbo3474         :::::::KFQK:A:I::E:Q:A:::Q::::::::::::::::::::::::::::::::::

consensus       YAMHEMGVSSRSAHRKSSSIVGETMGDYHPHGDSAIYDTLARMAQDFSMRYPLVDGQGNF
#oth            ...212.111212.....11..11..1.....1.1..11.1....1..1.1..1......
NP3500A         :::E::::T:::G:::::::::::::N:::::::::::A:::::::::L:::::::::::
VNG0889         :::::S::T:G:G:::::N:::D:::::::::::P:::A:V:::::::::::::::::::
Hut0820         ::::::::::G:S::::::V:::V::::::::::::::::V:::::::::::::::::::
rrnAC0455       ::::::::::NT::::::::::D:::::::::G:::::::V::::::::::::I::::::
Hmu1129         ::::::::::::::::::::::::::::::::::::::::V::::P::::::::::::::
hla2339         :::::A::T:N::::::::V::::::::::::::::::::::::::::::::::::::::
HQ2651A         ::::QS:I:A:::::::::::::::::::::::::::NA:::::::::::N:::::::::
HVO_1573        ::::QA::T:N:S:::::::::::::::::::::::::::::::::::::::::::::::
Hbo3474         :::N:A:::A::S:::::::::::::::::::::::::A:::::::::::::::::::::

consensus       GSVDGDPPAAMRYTEARMAPIAEELLADIEKDTVDFQSNYDDRLQEPEVLPSAFPNLLVN
#oth            ..1....1..........2.11....41.12...2.31.....14..4...132....1.
NP3500A         :::::::::::::::::::::::::::::D::::::E:::::::T::V:::ARV::::::
VNG0889         :::::::A::::::::::::::::::T:::::::A::A::::::T::A::::S:::::::
Hut0820         ::M::::A:::::::::::::::::::::::::::::A::::::E:::::::::::::::
rrnAC0455       ::M::::A::::::::::D:L:::::K:::::::::S::::::::::D::::KV::::L:
Hmu1129         ::M::::A::::::::::S::S::::::::::::::::::::::R::::::::M::::::
hla2339         ::::::::::::::::::S:::::::::::R:::::T:::::::E::::::A::::::::
HQ2651A         ::::::::::::::::::S:::::::DN::M:::E:TA::::::S::A:::A::::::::
HVO_1573        ::::::::::::::::::S:::::::D::D:::::::::::::K:::T::::S:::::::
Hbo3474         ::::::::::::::::::::::::::E::D:::::::::::::K:::V::::S:::::::

consensus       GSSGIAVGMSTNIPPHNLGEVIDATIHLIDNPDCTVEDLME------HVKGPDFPTGANI
#oth            .1..........1.......11..122.143.112.3..12111111111......11..
NP3500A         :A::::::::::::::::::::::A:::::::::A:A::IDTPDSDGYI:::::::::::
VNG0889         ::::::::::::V:::::::::::::::::T:::::L::::::::::Y::::::::A:::
Hut0820         :::::::::::::::::::::::::::::::::AE:T::::::::::Y::::::::::::
rrnAC0455       ::::::::::::::::::::LV:::V::LG::::::::::::::::::I::::::::G::
Hmu1129         :::::::::::::::::::::::::V::::::::E:::::D::::::::::::::::G::
hla2339         :::::::::::::::::::::::::VA::KE:::::::::::::::::::::::::::::
HQ2651A         :::::::::::::::::::::::::::::HH:E:::::::N::::::::Q::::::::::
HVO_1573        :::::::::::::::::::::V:::VE::E:::A::A:::::::::::I:::::::::::
Hbo3474         :::::::::::::::::::::::::T:::E:::::::::::::::::Y::::::::::::

consensus       VGRNAIHKAYKTGRGRLRVRAEYEVDEEEG---RIVITELPYQENKARLVERIADDVNEG
#oth            .1232134..31....211..1222343351222..12.1.1.2..1131....11.22.
NP3500A         :N:EG:WD::TE::::::::::MDIERTDRGGD:::V:::::::::::RI::::E::Q::
VNG0889         :::ADVKQ::Q:::::V:M::::H:ESNGR:RDS:::::::::Q::ST:::::::::RD:
Hut0820         ::K::::A::A::::::T::::::FE:TDSGRP::::::I:F::::::M:::::::::::
rrnAC0455       :::D::YS::A:::::::::::::::P::::::::::S::::::::::V:::::::::::
Hmu1129         ::KD::YS::A::::::::::D::::P::N::::::V::I::::::::M:::::E:::::
hla2339         :::::V::::::::::V:::::F::::::::::::::S:::F:Q::S:::::::E:::D:
HQ2651A         ::Q:::Y:::::::::V:::::FD:QDD--:::::::::::F:T:::::::::::N::A:
HVO_1573        :::::V::::::::::V::::D:D:F:::::::::::N:::::::::::I::::::::::
Hbo3474         ::K::V::::::::::I:::::F::::DGD:::N:::::::::::::::I::::::::D:

consensus       KIEGIRDLRDESDRDGVRVVVELKRGANADVVKNQLLEHHLESTFGVINLALVDGQPRVL
#oth            41..13.1......1.1.1.111.1221411.1.1..12...3..11.1.....12.2..
NP3500A         :::::::I::::::::::::I:C:::S:::::::::::::::N::SI:S:::::D:::::
VNG0889         :L:::T::::::::N:::I:ID::QK::T:::E:R:::S:::K::S:::::::::E:K::
Hut0820         I:::VS::::::::::::::I:C:::::V:::E::::D:::::::::::::::::E::::
rrnAC0455       :::::S::::::::N:::I:::::::::I:::E:R::D:::::::::::::::::::K::
Hmu1129         V::::A::::::::N:::I:::::::::V:::E:::::S:::::::::::::::DE::::
hla2339         S:::::::::::::::I::::::::D:M:E::::::::S:::R::::::::::::S:Q::
HQ2651A         T:::::::::::::::I:::::::::::P:I::::::::::::::::::::::::::Q::
HVO_1573        :::::::I::::::::I:::I:::::VM:E:::::::DN::::::::::::::::::Q::
Hbo3474         ::::::::::::::::I:::::::::::P:::::::::::::::::::::::::::::::

consensus       TLKETLEEYVDHRREVVRRRSEYELAEAEDRAHILEGRLKALENVDDVVELIRNSEDRDA
#oth            3..12.43124..12......121.3.23......2...3..31212..13.11221..3
NP3500A         N:::L::AF:G::::::::::QF::Q::K::::::::::V::D::::::DH:Q::D::::
VNG0889         ::::L:A:::S::K::::::::HD:G:::::::::D:::T::::A:E:::::QDA:::::
Hut0820         ::::::::::A::K::::::::FD::::::::::::::::::G:::S::D:::D:::::E
rrnAC0455       S:::S:QH:I:::::::::::::D:::::::::::::::::::::E::::::::R:::::
Hmu1129         :::::::H::A::K:::::::QF::D::Q:::::::::::::Q:::::::::QD:::::E
hla2339         D::Q:::Y::E:::D:::::::H::::R:::::::K:::::::Q::::::T:Q::D::::
HQ2651A         ::::::H::LE:::T::::::Q:::D:KR::::::::::R:::Q:::::DI::::T:::N
HVO_1573        :::::::H:L::::D::::::::::::::::::::D::::::D:I:::::T:::::S::D
Hbo3474         ::::::K::L:::::::::::::::G::::::::::::::::::I:::::T:::::S::D

consensus       AKAALR--------------PTFDFSEDQANHIVRMQLGSLTSMEAAEIEDEYEDVQARI
#oth            .223.31133112211112144111.22..4...2........1.231113...2.232.
NP3500A         :M::::::::::::::::::KAY:L:::::E:::::::::::::::G:::T:::::::E:
VNG0889         ::ET:K::::::::::::::SA::::Q:::D::::::::::::::::D::S:::::T:::
Hut0820         :::::E::::::::::::::E:::::TE::Q:::::::::::::::::V:::::E:E:E:
rrnAC0455       :RTG:Q::::::::::::::ES:::::E::A::::::::::::::::::::::::::NT:
Hmu1129         :RTE::::::::::::::::SQ:::::E::A::::::::::::::T::::S:::::::::
hla2339         :::::E::::::::::::::ADYE:::A::E::::::::::::::TQ:::S:::::T:::
HQ2651A         ::::::GEHVVESDERGESL::::::::::::::A::::::::L:SD:::::::S::E::
HVO_1573        ::::::GEVEVEVG::GEPL:::::::E::::::S:::::::::::::::A:::::::T:
Hbo3474         ::::::GEMTVEVD::GEPL::::::::::::::A::::::::::::::K::::E::D::

consensus       ERLETILNDEDELDAVIKDELREIKDEYDDERRTSIIEDTGTVTHEDLIPEEDCVVVVTE
#oth            11.221.22331.15.132..431123.1.1.2.222124.4.121...11.121..31.
NP3500A         ::::::::::S::LG:::::::D::A::A:::Q:DV:::A:S::R::::A::EV::::::
VNG0889         ::::E::GS:Q::LD::::::::::TQ:A::::::F:::::::AD::::::::T:::LS:
Hut0820         ::::::::::S::LD:::::::AV::::::D:::::V::D::::R:::::::E:L:::::
rrnAC0455       DY::SV::SREK::S::A:::Q:V::D:::D::::::::E:Q:::::::::::::::I::
Hmu1129         :::Q:::DS::::LT::::::::::A::::D:K:::L:AE:E:::::::::::::::I::
hla2339         :::::::G:P::::Q::IT::::::::::::::::F:::V:D::::::::::E::::MS:
HQ2651A         :::Q::::NP::::::VE:::AT:R:K:A:::::R::::D:::::::::AQ::V::::::
HVO_1573        :::::::G:QS::::::ES::LD:::::A:D::::FVAN::E::RA:::::::V::::S:
Hbo3474         D::NE:::NP::::::::S::TA::::::::::::F:::::::::::::A:::V::::::

consensus       DDYIKRMPLDTFDAQHRGGKGIIGTDLKEGDRVSSVFRANTHDYLLCFTNHGQVYRLKTY
#oth            2..1..11225.13.1........221.11.2..2.13111..1..3..21..1.3.121
NP3500A         E::V:::::SE::P::::::::::SRP:::::::T::T:S::::::::::Q:::::::VF
VNG0889         G:::::V:AE::::::::::::::S:::D:::::T::T:S:::::::::DQ:::::::V:
Hut0820         ::::::::A:R:::::::::::::A:P:::::::T:::::::::::A::::::::::R::
rrnAC0455       ::::::::VEN::P:N::::::::A:P::N::::K:::::S:::::::::Q:::::::::
Hmu1129         ::::::::V:A::::N::::::::S:P:D:::::K:::::S:::::::::Q:::::::::
hla2339         :::::::S::::R::N:::::::::::::::::::::A::S:::::V::::::I:E::::
HQ2651A         :::::::S:ED:RS:::::::::::S::D::T::::YV::::::::Y::S:::::Q::::
HVO_1573        ::::::::VSR:RD:::::::::::::::::N:::::VT::::D:::::::::::Q::A:
Hbo3474         ::::::::::::R::::::::::::::::::::::::V:S::::::Y::::::::K::::

consensus       EIPEMSRTARGKSAVNLLDLDDGEEITAVVNTD--DFDD--DEYLTMVTRNGYVKRTCVD
#oth            12...1.....1..1.21212.1.112...2312212332413221.1.24..1...324
NP3500A         :L:::G:::::T::::V:::N:::::::::::::::I:-::EG::A:A:EA::::::A:S
VNG0889         QV:::::::::T::::I:::::::::S:::TA:DL::KA:D::::::A:::::::::S:G
Hut0820         :::::::::::::::::INF::::::::::SM:::E:::::::CI::A::Q:::::::CS
rrnAC0455       ::::::::::::::I::I:::::::L::::S::::E:G:::::CI:::::::::::::CS
Hmu1129         ::::::::::::::::II::G:D:::::::S::::::EE::::C::::::::::::::::
hla2339         :::::::::::::::::I::::::::E:::::::::L::::::F::::::D::I:::A::
HQ2651A         Q:::::::::::::::::E:::::Q:::::::AEM:I::DEER:F::::QS::I:::S:N
HVO_1573        QV:::::::::::::::::F:::::::::::C::::LE::IEG::::::::::I:::GT:
Hbo3474         Q:::::::::::::::::E:::::::::::::A:::IE:ET:K::::A:Q:::::::S:E

consensus       EFENILSTGIIAAKLEDGDELVDVEVTDGSGDLVIGTEAGMAIRFDESEVRAMGRSARGV
#oth            4.2.1221..1.33.222.3.2.12..2154.2221126..2...3.311141..2....
NP3500A         ::::VHAG::R:VS:::D:S:::::::::D:::LV::KH::T::::::DA:P::::::::
VNG0889         ::G:::::::::ID:::::A:A::::::::H:VIL:S::::::::::GD::::::N::::
Hut0820         :::::::::::::::::::::::AV::::ES::::A::D::T:::::T:A:Q:::T::::
rrnAC0455       :::::::::::::::::S:::I::D::::T:::::A:::::T:::S::::SE::::::::
Hmu1129         :::::::::::::::::::A::::::::D:::::VA::G::T:::::::::E::::::::
hla2339         Q:G::R::::R:IR:::::::::::::N:GT:I:::SRN::::::A:::A:::::T::::
HQ2651A         S:Q::R::::::IS:GAD:K:I:::::::NR:IIL::RK::::::N:GD::SV:::::::
HVO_1573        R:Q:::::::::T::DE::::::::::G:ES:::::::R::S:::::D::::::::::::
Hbo3474         K:Q:::T:::::T::DED:::A::::::::H:::LASRD:::::::::D:::::::::::

consensus       RGIKLEDDDAVAGVAATDEDDDRWLLTVTENGYGKRTDLDEYRTQSRNGKGLIDIKTNDR
#oth            3.11.333.532121.322233332....23.1...14242.15...1....1...121.
NP3500A         N:::::G::RAT:LV:ASS::::D:::::K:::::::P:S:::R:::Y::::V::::DE:
VNG0889         ::MD:DAA:RI:::::VESE:::S::::::F::::::RVG:::S::::::::V::::G::
Hut0820         :::D:R:G:N::::V::::H:E:A::::::R::::::P:S:::::::Y:::::::::G::
rrnAC0455       N::::Q:::K::AMV:::D::P:S::::::H:F::::K:::::::::Y:::::::::D::
Hmu1129         :::D:Q:G:K::AMV:::DH:::A:::::::::::::L:A::SK:::Y:::::::::D::
hla2339         I::D:REG::::::::I:::RHN:V:::::::::::S::::::L:::::::::::::G::
HQ2651A         H::::::T::::AL::V:D:Q:D:V:::::H:::::::I:R::Q::::::::::::::E:
HVO_1573        ::::::G::V::::::I:::HHS:I:::::::::::::::A:::::::::::::::A:E:
Hbo3474         ::M:::G::ELV::::V:::RHN:V::::Q::::::S:IER::R::::::::::::::::

consensus       NGPVCAVEAVGEDDHLVVMSESGQIMRTPVEDISTVGRNTKGVIVMDLDEDDTVASVDVV
#oth            ..5143431.433.3133..36...21321211.1.....1..41.42353.51.11225
NP3500A         :::::SLD::S:::G::I::::::::::T:DE:::::::::::V::SV:D::RI:GI::D
VNG0889         ::D:VS:D:::D::S:::::AD:::IQM::DE:::::::::::NI:AVGSG:E::G:S:R
Hut0820         ::G:T::N::A::::VI:::AT:::::C::::V:::::::M::TI::VAA:::::::::I
rrnAC0455       ::R:STAK::TDE::::I:::Q:::::IRAG:V:Q::::::::TI:G:E:::R::::T::
Hmu1129         ::R:ATAK::R::::::I:::::::::I:AG:V:Q::::::::KI:A::GV:N::::T::
hla2339         ::EAV:I:::TYG:::LA::DN::::::R::E::::::::::::::N::P::::::::I:
HQ2651A         ::H::E::T::IS:E:FM::RK:::L::::D:::::::::M:::::::EDT:::::::TH
HVO_1573        ::::::INT:::G:::::::DE:::L::::::::::::::M:::::::::G:D::::::I
Hbo3474         ::::::M:T::YG:::F::::::::L::::::::::::::M::T:::M::G:H::::::Y

consensus       PAEVDEDE----------------------------
#oth            345766543244242233232333332111212221
NP3500A         S::-----::::::::::::::::::::::::::::
VNG0889         A:DQADG:E:::::::::::::::::::::::::::
Hut0820         :GTAI::S::::::::::::::::::::::::::::
rrnAC0455       :::TE---::::::::::::::::::::::::::::
Hmu1129         ::::EN::::::::::::::::::::::::::::::
hla2339         SES:HGG:TDVEGDE:::::::::::::::::::::
HQ2651A         :RTD:SS:ADSGDGESESENATATTPS:::::::::
HVO_1573        ::AMTTEGEELDDADSVEEDAETDAKADAKADADDE
Hbo3474         NVGS::VDEEASDEEAPDDETSDEDTSD::EDTSTE