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[K] (RPB9) COG1594 DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS
9 genomes BUD0347 9 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG1743

rrnAC0313

HVO_2632

Hbo2210

Hmu2517

Hut0021

hla1254

NP4938A

HQ3190A

Pairwise sequence scores
Consensus score879 VNG1743 HQ3190A Hbo2210 Hut0021 rrnAC0313 Hmu2517 NP4938A HVO_2632 hla1254
634VNG1743 1794 567 647 562 586 630 594 562 560
644HQ3190A 567 875 617 653 601 591 617 613 608
759Hbo2210 647 617 878 659 665 698 668 665 677
745Hut0021 562 653 659 889 727 677 700 600 648
749rrnAC0313 586 601 665 727 882 775 692 654 667
737Hmu2517 630 591 698 677 775 880 665 649 639
758NP4938A 594 617 668 700 692 665 879 630 689
690HVO_2632 562 613 665 600 654 649 630 891 718
746hla1254 560 608 677 648 667 639 689 718 914

224 symbols
consensus       ------------------------------------------------------------
#oth            111111111111111111111111111111111111111111111111111111111111
VNG1743         MSRRCSRRCRSPRSTRTRCGRRSRRTPTARRRHRGVQPRPTARRPTTGRRPSWSRVSVMA
HQ3190A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hbo2210         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hut0021         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
rrnAC0313       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hmu2517         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP4938A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
HVO_2632        ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
hla1254         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       -------------------------------------------------------MQFCD
#oth            1111111111111111111111111111111111111111111111111111222....1
VNG1743         VRTLPRRRRWAAPTRARRSRRWWTWIISGWLTVRSSPGGRETTRVIFPPTTSNRG:::::
HQ3190A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hbo2210         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hut0021         :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::E
rrnAC0313       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hmu2517         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP4938A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
HVO_2632        ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
hla1254         ::::::::::::::::::::::::::::::::::::::::::::::::::::VAY:::::

consensus       ECGSMMHAQGGEMVCQS--CGATTEKDEDLAAEFVSTAAQTDDDVIETEEGANFEGKPTA
#oth            1.....242222.1.5111..334331434134.11.44.22212..1111131.....1
VNG1743         :::::::K:D:::::A::::::SADSEGSEG--::E::S:DTS:::::S:D:AS::::::
HQ3190A         ::::::KKRNEQ:::G:::::YQ:DQ:SAIG-N::::QK:::E:I:::::::E::::::D
Hbo2210         :::::::N:D:Q:::S:::::::Q:Q:S:::S:::::E::D:S:::::::::::::::::
Hut0021         ::::::::D:E::::::::::YREA::Q:::DD::::QD:::::L:::::D:::::::::
rrnAC0313       D:::::::D:D:::::::::::RVA::::R::A::::DE:S::EL::::::S::::::::
Hmu2517         D::::::TD:D::::K:::::SRVQ::A:R::::::::::S:::::::::::::::::::
NP4938A         D:::::::::EA:::S::::::::::::AK:::::::D:::::::::SSPD:D:::::::
HVO_2632        ::::::VS:N:A:T:TNDD::G:A:R::E::::::::E::SG:EL:::::::E:::::::
hla1254         D:::::VSRD::::::NDD::::::R::A:::::E::TE::G:E::::::::::::::::

consensus       DDVTCDECGHGEAWYTIKQTGSADEPPTRFFKCKECGHRWRGYN
#oth            3223.32.1.12.........1...........12..3...2.1
VNG1743         EE-::P:::::::::::::::::::::::::::QD::N:::D::
HQ3190A         :N:I::::E:TV:::::::::::::::::::::::::Y:::D::
Hbo2210         T::::ED:::::::::::::::::::::::::::N::R::::::
Hut0021         :::V:::::::V:::::::::::::::::::::::::::::::S
rrnAC0313       :::::E:::::K:::::::::::::::::::::Q:::::::E::
Hmu2517         E::::AD::::K:::::::::::::::::::::QD::N:::E::
NP4938A         ::II:::::::::::::::::A:::::::::::::::::::::S
HVO_2632        K::H::D:::TK:::::::::::::::::::::Q:::Y:::E::
hla1254         K:IV::K::::::::::::::A::::::::::::::::::::::