|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1465 | VNG0711 | NP4154A | HQ1809A | Hut0511 | HVO_1250 | Hbo0295 | hla1900 | rrnAC1254 | Hmu1716 |
1027 | VNG0711 | 1500 | 848 | 724 | 960 | 881 | 839 | 928 | 892 | 872 |
1041 | NP4154A | 848 | 1505 | 781 | 901 | 871 | 846 | 924 | 893 | 889 |
916 | HQ1809A | 724 | 781 | 1431 | 719 | 932 | 929 | 810 | 771 | 737 |
1148 | Hut0511 | 960 | 901 | 719 | 1504 | 986 | 936 | 977 | 970 | 1021 |
1200 | HVO_1250 | 881 | 871 | 932 | 986 | 1447 | 1155 | 982 | 955 | 955 |
1144 | Hbo0295 | 839 | 846 | 929 | 936 | 1155 | 1457 | 973 | 918 | 948 |
1147 | hla1900 | 928 | 924 | 810 | 977 | 982 | 973 | 2513 | 921 | 1002 |
1127 | rrnAC1254 | 892 | 893 | 771 | 970 | 955 | 918 | 921 | 1543 | 1242 |
1151 | Hmu1716 | 872 | 889 | 737 | 1021 | 955 | 948 | 1002 | 1242 | 1547 |
337 symbols consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 VNG0711 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP4154A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ1809A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut0511 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_1250 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo0295 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla1900 MARPAAPCDRETIRLSGGDDRAPGSRRVLTEERDGDGAASSPERRYRRRSFRERRSSRSR rrnAC1254 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu1716 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 VNG0711 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP4154A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ1809A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut0511 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_1250 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo0295 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla1900 PSRRYGRRADSSGSGPSRSRCSSSRRGAGWAPSSSRTSRPGSRPGLRIAPGRVDDSHRRE rrnAC1254 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu1716 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus --------------MVALESDSE-LERGDPAPDFELPGTDGETYSLDDFADYDALLVVFT #oth 1111111111111112331.2323142.23..5.1..121.2222.22142511112..1 VNG0711 ::::::::::::::::Q:D:EP::::V:A:::G:S:::A::::H::AS:T:V::VV:::: NP4154A ::::::::::::::-M::::A:DE:DV:::::A:::::V::DQH:::::GG::::::::M HQ1809A ::::::::::::::::LV:::::::S::::::Y::::AAA:D:VT:::LLS:::V:I::: Hut0511 :::::::::::::::T::D:ER:AI:::EV:::::::::::::HA:A::T:HE:V::::: HVO_1250 ::::::::::::::::L::::::::::::A::::::::::::::::SS::::::V::::: Hbo0295 ::::::::::::::::LK::::N::SH::V::::S:::::::::T::S:::::::::::: hla1900 TRGTILGSAPEWAC:::M:::::::D:::A::A:::::::::::T::S:-:A:T::L::: rrnAC1254 ::::::::::::::::S:D:E:DV:G:::E::T:::::A::A::::S::::K::::I::: Hmu1716 ::::::::::::::::::D:EDDV:Q:::E::V:::::::::S:T::A:::RE::::::: consensus CNHCPYAQAKFDELNHLAAEYDDLAVVGINPNDAEEYPDDSFERMQELVADGTIQYDAYL #oth ......13..2131.51153.131......1..2221.2..323.212132121411... VNG0711 :::::::K::V:T::AI::D::RV::::::::::D:::A::MA:::A::::::::::::: NP4154A ::::::V::::ETM:R::DD::::::::::::::D:::E::::T:V:YADR:D:DIT::: HQ1809A :::::::E::VE:::::TET:PS::::::::::::A::E::LD::R:R:SADEVR:T::: Hut0511 :::::::V::::P::E::::::::::::::A::SD::::::::K:V:::E::::A::::: HVO_1250 :::::::K:::E::::::SA:::::::::::::::DR:E:::::::::::::::G:T::: Hbo0295 :::::::::::::::Y::RT::E:::::::::::::::::::D::::::E::::::T::: hla1900 ::::::::::::L::D::::::::::::::::::T::::::V:A:R:R::::::A::::: rrnAC1254 :::::::K::I::::R::T:::::::::::A::P:::::::::::::::ER:E::::::: Hmu1716 ::::::::::::::::::::::EV::::::A::P:::::::::K:R:::D:::VD::::: consensus RDESQAVAAAYGAVCTPDPFLFEN----DGGAFRLAYHGRIDDAMSPDDEPTE---FEMR #oth 1.12143132...2.......15422212334.313111.2...33.1121342113212 VNG0711 ::AT::T:R::::T:::::::LRTADT::DA:::V:::::L:::LG::ED::RD:GGD:: NP4154A :::P:ST:E:::::::::::::H::::::::::::V::::F:::LA:::::S:APG:::: HQ1809A :::::::TDE::::::::::::NRRSSG:ESQ:E:VF:S::::::::NEAVNA:::Y::: Hut0511 :::::DI:R::::::::::::L::::::::::::::::::::::::::E::ET::::::: HVO_1250 :::::::::D:::::::::::L::::::T:DG:E::F:S:::::::::::VSD:::Y::: Hbo0295 :::::D::RE:::::::::::::K::::E:DE:V:RFQS:::::::::::V:D:::Y::: hla1900 :::TGEA:D:::::::::::::GR::::::D::::Q::::L:::LN:::::::::::YI: rrnAC1254 F::::N:::::::R::::::::R::::::N:::K::::::L:::PN:::::S::::R::A Hmu1716 F::::EI::::::R::::::::VD:::::::T::::::::L:::TN::::::::::R::K consensus TAVEAVLAGDEIEAEERPSRGCSIKWKDG-------- #oth 43112113133325546..1..1..153232232112 VNG0711 D:ID::::::PV:TAFL:::::::::T::E::::::: NP4154A A:I::::N:A:P:PAPG:::::::::LE-:::::::: HQ1809A R::::::NDEP:PLT:T::Q:::::----:::::::: Hut0511 NV::DL:::R:LTD:F::::::N:::T::SVRPE::: HVO_1250 :::::L::::D:PV::Y::Q::::::::E:::::::: Hbo0295 :S::::IG::::PLD:I::Q::::::R:-:::::::: hla1900 D::D:::::E:V:VPD::::::::::P:E:::::::: rrnAC1254 :H::TL:D::Q:T:V:K::::::::::P:NEPAYWDV Hmu1716 AHI:TL:::E::T::AK::::::::::P:NEPDYWDA