Home |  Text search
9 genomes BUD0350 9 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG1417

rrnAC0994

HVO_2867

Hbo2632

Hmu1651

Hut0597

hla1724

NP2996A

HQ2408A

Pairwise sequence scores
Consensus score1813 HQ2408A VNG1417 Hbo2632 HVO_2867 hla1724 NP2996A Hut0597 rrnAC0994 Hmu1651
859HQ2408A 1976 636 673 797 676 637 570 610 617
1030VNG1417 636 2045 501 687 797 672 733 813 783
936Hbo2632 673 501 1524 778 681 606 503 524 642
1092HVO_2867 797 687 778 1793 824 730 811 684 769
1177hla1724 676 797 681 824 2061 811 794 856 865
1122NP2996A 637 672 606 730 811 1854 831 853 987
1094Hut0597 570 733 503 811 794 831 1821 945 991
1158rrnAC0994 610 813 524 684 856 853 945 1853 1169
1252Hmu1651 617 783 642 769 865 987 991 1169 1820

304 symbols
consensus       -------------------------------MKVRGERECKECGTRWSYYETGSVECPDC
#oth            111111111111111111111111111111114211412145124213123123331141
HQ2408A         :::::::::::::::::::::::::::::::::I::Q:Q:S:::HE:::FD::Q:A::A:
VNG1417         MPGFPTPREIGRWSVRRRATGVIPPPGQRRS:D::::::::S:::::::F::::::::S:
Hbo2632         :::::::::::::::::::::::::::::::-----------------------------
HVO_2867        ::::::::::::::::::::::::::::::::EI:::::::::DH::::::::::S::Q:
hla1724         ::::::::::::::::::::::::::::::::::::::::R:::V:::::K:::::::::
NP2996A         ::::::::::::::::::::::::::::::::::::R::::A::::::::D::DTA::S:
Hut0597         ::::::::::::::::::::::::::::::::RI::::::QN::S::T::::::::::::
rrnAC0994       ::::::::::::::::::::::::::::::::::::::::QD:::::R::::::IA::::
Hmu1651         ::::::::::::::::::::::::::::::::::::H::::A::S:::::::A:::::::

consensus       GSLRSVGVDD-RTRHTDAAATLDLTPHREAIDDEP---LRDVADAAAERLREYVRRRGFI
#oth            1143...3121135..2225311.212163423542114434344143442215.53.12
HQ2408A         :::K:::RGE::KT:::S:IE:::SA:QQ:L:A:TD::VSMI:EGLTTT::D:I:Q:::L
VNG1417         ::R:::::GE::ET:::T:DA::::AAQR:GSED-:::VL:ALEP:T:AC:::C:S:::V
Hbo2632         --MQ:::IG:::MQ:::S:EE:::A:::N:L:::S::::T::TAGLQSD::A:L:A::::
HVO_2867        ::::::::GG::E:::ATQTD:::SA::S:VG:GS:::I::A:P:LKSD::D:::QT:Y:
hla1724         :::::::::::::A::::P:::::SA::ARFG:ARGTLPEEGV:DLKDD::::A::::::
NP2996A         :::H:::T::E:KL::AT::::::::V:::V::V::::::RL:TR:I::T::FT:GY:::
Hut0597         ::V::::::E::::::ASPV::E:::A::M::V:::::PER:::R:::CAA:F:::D:::
rrnAC0994       ::IH:::I:E:H:E::::P:::::::V:SR::ADT:::T:E::::::::C:::T:K::::
Hmu1651         ::::::::::::::::N:PVEY::::V:GS::EQ:::::EEI:TD::::SS::::::::V

consensus       DGGELLPLDDTYLAAAELLHVADVLARLRDPTDDEQLYVLALLRGADDGDRPAPDAVPSS
#oth            31.3.22213.31215..43125433165533144322244.163.24.4.14264..45
HQ2408A         N::T:Q:P:::L:S::::::AV:::D:C:H:::EAR:::TK::GV:N::H::T:NS::T:
VNG1417         S::T::D:::::::::::WR:GV:::GQHAIS::::RH:V:::H::A:::::T:A:::A:
Hbo2632         R::D:RDI:::::TVR::::A::::S:::::DEET:::::S::::::Q:E::K:E::::V
HVO_2867        R:::::::G::P:::H::::AV::V::SNR:::::::::IS::QR::E:E:L:::P::D:
hla1724         R::::::::::::::R:::EAV:LYD:::::::RDRE:L::::A:::::::::TK:::D:
NP2996A         :::S:Q:::E:::::M::RY::GE:E:RF::::E:T::LTT:FK-::K:V::DVGD:::E
Hut0597         :A:D:Q::GA:FV::M::K::GRAI::SMTV::::ERFL::::D::AS:Q:::::S::ET
rrnAC0994       :A:::R:::P:FV::V::Q::GAH:::ELRSG:PAER:FYE::G:::::::::V:E:::A
Hmu1651         :::S::A::E:FV::T::R:::SEI::TLQ:::AQE::FVT::::::E:E::E:R::::G

consensus       LREARGLAYAAAVDAYRRDLRAYLDDNPD--------------------------PEARQ
#oth            13641.1.2333233133.24332335351222222222122222111111111146326
HQ2408A         :TT::::::TEVLSTFHQ:FTKWITEESSVMDGSVQSVTEMQESD::::::::::VSIH:
VNG1417         ::GP::::A::::::::T:V:::CGGDVP::::::::::::::::::::::::::MPE:D
Hbo2632         :S::::::::ESLA:::::FSTW:E:H::::::::::::::::::::::::::::::::K
HVO_2867        MTD:::::::E:I:::C:::STW:::::N::::::::::::::::::::::::::::V:T
hla1724         ::::::M:AVR:::E::T::L:F::ELAGVDTVEAVGESETASVSVTGDDLLARIDP::A
NP2996A         ::AM::::::D::::::S::K:::::Q:::::::::::::::::::::::::::::VVGG
Hut0597         :VPV::::A::T:SE::::::Q::::D::::::::::::::::::::::::::::ER::T
rrnAC0994       ::VPY:::MS::::S:Q::V:T:::A:SE:::::::::::::::::::::::::::T:::
Hmu1651         ::PSY:::MT:::E::Q:::::H:::E:::::::::::::::::::::::::::::Q::S

consensus       LLERLRDHRKRVEALDGDVPPADAERLVAAARDLGRYLRDGDEDALARARDRLNALD---
#oth            3322353252.23..2.212363133115311422633443.441252.244.4535434
HQ2408A         :R:::DTYLT:S:::Q::I:VETS::F:II::K:HHGVVNH:T:::ET::MK::SVSFDS
VNG1417         ::::A:E:GR::D::::E:D:Q:SA:::::V:AI:DA::-:::AGIE:::T:::::G:::
Hbo2632         T:AT:GE:I::::::Q::::VEES:T::RT::E:AA:A:::::S::TT:::::SR:A:::
HVO_2867        T::T:SN::::::::::A:SLSES:A::E:::EIHTA:I:N:L::::S:::T:A::F:::
hla1724         :::::::RT::::::T:::::H::DA::D::NS::E:V:T::KT::N::::::SDTSDTE
NP2996A         HV:::A:RVR:IQ:::::::SRQ::S:::V:::I:::IA::::N:::::DE::-DT:PTR
Hut0597         V:GAVE:::T::A::::::S::Q::A:IE:::AV:TH:IED:P:::D::::H:SE::PER
rrnAC0994       :SG:I::::::::::::::D::::N:::H::::::S:IT-:::S:FV::ENW:TGIEDDT
Hmu1651         :SG:I::::::I:::::::D:K::D:::H:::::::::AE:::S::VT:DNW::G::G::

consensus       ----
#oth            4333
HQ2408A         PAAE
VNG1417         ::::
Hbo2632         ::::
HVO_2867        ::::
hla1724         TNHH
NP2996A         AEEF
Hut0597         ::::
rrnAC0994       V:::
Hmu1651         ::::