|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2719 | VNG0789 | HQ2360A | Hbo0410 | NP3206A | HVO_1147 | Hut1413 | hla2681 | rrnAC1427 | Hmu1735 |
1245 | VNG0789 | 2714 | 687 | 904 | 748 | 889 | 919 | 987 | 1009 | 819 |
1235 | HQ2360A | 687 | 4083 | 1224 | 789 | 972 | 799 | 875 | 976 | 888 |
1629 | Hbo0410 | 904 | 1224 | 2948 | 1052 | 1157 | 986 | 1263 | 1158 | 1088 |
1465 | NP3206A | 748 | 789 | 1052 | 2624 | 1020 | 996 | 1038 | 1147 | 1170 |
1635 | HVO_1147 | 889 | 972 | 1157 | 1020 | 2726 | 1032 | 1136 | 1161 | 1001 |
1486 | Hut1413 | 919 | 799 | 986 | 996 | 1032 | 2765 | 1067 | 1306 | 1143 |
1717 | hla2681 | 987 | 875 | 1263 | 1038 | 1136 | 1067 | 3133 | 1176 | 1063 |
1773 | rrnAC1427 | 1009 | 976 | 1158 | 1147 | 1161 | 1306 | 1176 | 2722 | 1462 |
1690 | Hmu1735 | 819 | 888 | 1088 | 1170 | 1001 | 1143 | 1063 | 1462 | 2672 |
580 symbols consensus MSAAGREQPAA-DA---DVAGTLRDAAFVRLVARADGDALAAAGLLARALRAVGVPFQVR #oth .243345464512523422.4414215111144543.3221.2.11122124731.2221 VNG0789 :ATT::SSNDS::G:VR::::VVSG:E:::VT:APT:GCVV::::::GVCDE::::S::: HQ2360A :TIST:SEMPTI:GSAES::T::T:T::::VIC:SN:::I:::::::::::REST:::I: Hbo0410 :::QIDPTQ:P:::PAES::SA:A::::::V:C:::::::::G::::::::RTS:::H:: NP3206A :::::HPE::R::R:::-::A:::::E::::::T:::::::::::::SG:D:AE::Y::S HVO_1147 ::VSPA::TP::A-::::A:A:::E:T::::RVHGC:A:V::::VVG::::TLD:::RI: Hut1413 ::TT::QSGEG:AR::::A:SR::E:GL:H:APV:T:::I::T:V:::::D:I:::::IS hla2681 :TE:TSAT::P::::::-L:DV:A::P:A::::TD::::V::::::::::::::T::::: rrnAC1427 :::T:::PTP::TS:PG:L::S::E:::::::SD:T:E::::T:::::::D--DT:::AS Hmu1735 ::T:::D:AS::TP:PS:L::::DG:D:::::::::::G:::T:::::::T:RET:::AS consensus VVRFPDAPDRATDADVT-------VAVGADGGDADATL--SDRPASTAAFEVARALGTDP #oth 254545454533243542211111332.54763223543163445443233322213353 VNG0789 ::SE:PSHSG:A:GSQAATPTASH:T::CEAVA:::SV::---TGVAD::AL::EV::H: HQ2360A ADQ:GH:NPTV::Q:DGCC:::::I:L:LSHPA::ININPVE:SVTRSVYA:TE::T:PT Hbo0410 AGS:VSM::APD:DG:L:::::::L:::T:VS:::::VAPD:GAT:RR:Y:::A::TPAG NP3206A LAAV::P:--:::::C::::::::::::T::::VTV--:::ES:LAV::A:IV:S:AAEA HVO_1147 AT---::::TVAHD::V:::::::AV::LSDA:::LE:::----DPND:VS:V:E::V:: Hut1413 ::QT:ADAA:::E::R:::::::::TL:PASQ:::L::G:::::::V:::G:::S:DAPT hla2681 :S:--:PVPD:G:DA:A::::::::TI:::R:PHAIPG::LG:::::D::AI:::::V:: rrnAC1427 :::PFED:::T:ET:I::::::::I:I:RTQLT::V::::T::A:A::-::T::E:::-A Hmu1735 :A:TGE:GA:T::::::::::::::S:::E:V::T:::::A:E:L::::V:TV:::::E: consensus D-------------------------PALALAGAVAAGV--------------------- #oth 4111111111111111111112233243111..443216111111111111111114221 VNG0789 :::::::::::::::::::::::::::VVTA:::::D::::::::::::::::::::::: HQ2360A HASESGVDTTDDVSGEDVNITIPPTDTL:::::IITT::SLETKSASNNQEQTQAQSQTT Hbo0410 E:::::::::::::::::::::PGPD:V:::::I::::E:::::::::::::::::HPG: NP3206A V::::::::::::::::::::::::DAT::::::YC::Y::::::::::::::::::::: HVO_1147 ::::::::::::::::::::::::::::V::::LH:::T:::::::::::::::::TP:: Hut1413 T::::::::::::::::::::DATDVV:::A::V::::D::::::::::::::::::::: hla2681 :::::::::::::::::::::::::::VV::::V::::S:::::::::::::::::VPGT rrnAC1427 :::::::::::::::::::::::::::::::::TI:::-::::::::::::::::::::: Hmu1735 ::::::::::::::::::::::::::L:::::::TV:--::::::::::::::::::::: consensus DGDGDLADAAE-----DAG-VERRPGVAVPTADLADGLAHSTLVHAPFSGDREAARAALA #oth 344353453111111152334323..113.352322...311.42121.11632261531 VNG0789 EPPA:VRA::::::::---AWT:::::G:::::::A::::::::::S::::EQ::G:F:: HQ2360A ::S:FATSLL:TLTTT:TVS:DQQ:::GI:ISNVV::::::::M::S::::VD:TH:MM: Hbo0410 AT::G:LSV:::::::ET:A::::::I:A:V:::::::::T::A::S:::::::VT:V:: NP3206A EPE:W:---L::::::Q:::L::A::I:I::D:SIE:::G:::L::G::::G:::A::V: HVO_1147 KE:T::::::A:::::::::::AG:::::::G:::::::::::::::::A:::R:Q:D:: Hut1413 EPT:A::::L::::::E:D:I::::::::::::::::::Y:::::::::::P:::::T:: hla2681 ::S::ALE::::::::HTDR:R::::::L::V:::::::A:M::RTSY:::S:::::::: rrnAC1427 :V::TV:E::::::::Q:::LDQ:::::::GT:::::::::::FV::::::ADE:::T:: Hmu1735 :::SGE:TL:::::::A:::F:::::::::VSEYV::::::::L::::::E:A:VED:IE consensus ELDLPAD----------------------LDDDAHRRLASLVALDAAEDE-ATPRAAEAV #oth 22344332211111111111111111111323333123..21123236243135212512 VNG0789 ::G::PE::::::::::::::::::::::P:AA:R:::::A:::::TA:-::P:C::D:: HQ2360A :I::DV:IDAHSSEGDDQGEFTDAVSLIN:S:EDQ:TI::A:TI:VIKASTP:VGT:ISL Hbo0410 D:::::E::::::::::::::::::::::P::A:::T::::::::V:G:DD::V::::S: NP3206A D:ETADG::::::::::::::::::::::------:S::::A::S:V::-::P::::N:: HVO_1147 ::S:::E::::::::::::::::::::::::A::R::V:::::I::TSG::::A:::T:: Hut1413 :R:ALDP::::::::::::::::::::::K::E:RL:A::I:::T:V:GAD:DS::S::: hla2681 D:G::::::::::::::::::::::::::::::::::::::::V:V:DA:G:ST:::S:: rrnAC1427 :::ISP:GP::::::::::::::::::::PSA:D::::::::::TVTT:-::P::::D:: Hmu1735 A:GSDD:::::::::::::::::::::::--T:R:::V::::::AI:G::T::D::T::I consensus ERALRPYATPGG--PFETVGGYADVLDAVARERPGTGVALAL----GH-DVREAALDAWR #oth 22213.54223211222.21.11...2.32114..411.1111111122453451.31.1 VNG0789 HD::::R:::D:::MMA::E::::::N:::WAA::H::::G::::::V:AD:T:V:A::Q HQ2360A :Q::H:QYL:D::::MT:IE::::::R::S::::::AI:F:I::::S:::ASD:::S::: Hbo0410 :::FK:::::DA::::T:L::::::::::::::::::::::::::::::ET:VP::E::: NP3206A Q:F:H:HS--VD::R:::L::F::::::::::H::S:I::::::::::::IE:T::E::: HVO_1147 ::V:G:ET::N::::::::::F::::::TV::S:::A:::::::::::::::D::::::: Hut1413 :DV:::::--:::::LT:I:::::::::A:::Q::VA:::::::::::EPAI:G::S::: hla2681 :::::::::V:DAA::::::::::::::L:::A:::::::::DSDP:D:EL:A::::::: rrnAC1427 Q:::::T:--::::::::::::::::::::::Q:::A:::::::::::EA:S:D::A::: Hmu1735 ::::H::V--::::::::I:::G::::::::::::L::::::::::::DG:::Q:::V:: consensus SHAQAAHAALRDATTGRYDGLFVAR----------------------------------G #oth 4.1523.532351244.1312522321111111111111111111111222222222234 VNG0789 A::APS:::V:A:SLA:HR:VV::D::::::::::::::::::::::::::::::::::- HQ2360A E::::V:HI:QT:H::::::VYLL:CRDHDEFQDSSTTSGPDETSNTTESGRTETDSSV: Hbo0410 D::A:::RT:SEGH::::E:VH:V::::::::::::::::::::::::::::::::::AT NP3206A ::G:R::E:V:S:SSS::::VS:V:::::::::::::::::::::::::::::::::::V HVO_1147 D::::T:::::G::::::ES:SALS::::::::::::::::::::::::::::::::::C Hut1413 T::ER::D:V::::VR:HA::V::E::::::::::::::::::::::::::::::::::- hla2681 ::GL:::R::D:::I:::::CL:::V::::::::::::::::::::::ALAGGDRSEED: rrnAC1427 :::TR::D:VSE:::::::::::::::::::::::::::::::::::::::::::::::: Hmu1735 T::SR::TGI:T:S:Q:::::::V:::::::::::::::::::::::::::::::::::: consensus DAAPTG---L-TVARLARDFRSPEPVVLAVGDGAAALAATDDRD------------VAEA #oth 24433422324...1.4321121.142112344322233546443222222111114445 VNG0789 --V::A:::SP:::::L::Y:AT::A:::::TET::::T::---::::::::::::---- HQ2360A :ISTP:::R:L:::E::SRYQT::SL:::I:EEVV:V:TQPT::TQSTSTTVDAVV:::: Hbo0410 ::VA:HPGR:A::::::::::::::MA:VI:::V:::::VEHGAAR::::::::::A:S: NP3206A :G:APD::T:G:::::WFHY:::::T:V::T:::::VT:EGA--:::::::::::::ESP HVO_1147 :LSSP:::R:A::::::::::::::T:::::V:::::VS:GPAG::::::::::::LD:D Hut1413 T:G::::::-::::::V::::::::LA:VADGDR:T:::IA:H:::::::::::::ARAI hla2681 ::::DAAAV:P:::::V:::::::::AV::DEA:GR:::AATGGGRAAGGA:::::T::P rrnAC1427 ::M::::::-::::::FA:Y:A::::T:V:T:DR::AR:::G:::::::::::::::::T Hmu1735 ::M:VE:::-::::::VAR:::::::T:V:AGNR::VRG::::S::::::::::::::P: consensus LA--------------------------AAASAV--GG----------------AVGTAD #oth 452222221111111111111111111132365234144111111111111111551345 VNG0789 --:::::::::::::::::::::::::::D:H::LP:-::::::::::::::::S:::RR HQ2360A :RTNIDIETTDIPAENNAVSQMDSTTTP:ESDD:DD:ANAGDTGNDEINQMQDGW::D:N Hbo0410 V:::::::::::::::::::::::::::DEFGG:DA:A::::::::::::::::WS:D:R NP3206A :R::::::::::::::::::::::::::E:TT:L::::R:::::::::::::::STARNG HVO_1147 ::::::::::::::::::::::::::::::::DLPAAS:::::::::::::::::T:SPS Hut1413 :D::::::::::::::::::::::::::S:TASIDHAEA:::::::::::::::VA:D:: hla2681 IGLGDACR::::::::::::::::::::S:::E:::::D:::::::::::::::GW:::: rrnAC1427 MH:::::::::::::::::::::::::::::ET:::::D:::::::::::::::::::G: Hmu1735 :D::::::::::::::::::::::::::::TT:::::-::::::::::::::::--:::T consensus RATARFDAAAE--DI-------------IAAVREAL---- #oth 32652245344334311111111111113133.1353211 VNG0789 ::VTTLGDSSDADAV::::::::::::::ET::GG::::: HQ2360A Q:LV:VNSTVPPAE::::::::::::::::V:::LTREES Hbo0410 ::VV::::DTPEAE:::::::::::::::::::::ST::: NP3206A HG::T:::S:T:::F:::::::::::::T::I:::::::: HVO_1147 E::MT::S:::PS:V:::::::::::::V:::::VRR::: Hut1413 ::HLTVSG:T:::TL:::::::::::::V:::::VIADE: hla2681 :GGIAVGT:D:ADR:EEREATDGDITGAL::L:::::::: rrnAC1427 ::R::::VSTA:::F::::::::::::::E:F:::V:::: Hmu1735 :TN:::EGD:D:::L:::::::::::::VEQ:::::::::