Home |  Text search
9 genomes BUD0356 9 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG0789

rrnAC1427

HVO_1147

Hbo0410

Hmu1735

Hut1413

hla2681

NP3206A

HQ2360A

Pairwise sequence scores
Consensus score2719 VNG0789 HQ2360A Hbo0410 NP3206A HVO_1147 Hut1413 hla2681 rrnAC1427 Hmu1735
1245VNG0789 2714 687 904 748 889 919 987 1009 819
1235HQ2360A 687 4083 1224 789 972 799 875 976 888
1629Hbo0410 904 1224 2948 1052 1157 986 1263 1158 1088
1465NP3206A 748 789 1052 2624 1020 996 1038 1147 1170
1635HVO_1147 889 972 1157 1020 2726 1032 1136 1161 1001
1486Hut1413 919 799 986 996 1032 2765 1067 1306 1143
1717hla2681 987 875 1263 1038 1136 1067 3133 1176 1063
1773rrnAC1427 1009 976 1158 1147 1161 1306 1176 2722 1462
1690Hmu1735 819 888 1088 1170 1001 1143 1063 1462 2672

580 symbols
consensus       MSAAGREQPAA-DA---DVAGTLRDAAFVRLVARADGDALAAAGLLARALRAVGVPFQVR
#oth            .243345464512523422.4414215111144543.3221.2.11122124731.2221
VNG0789         :ATT::SSNDS::G:VR::::VVSG:E:::VT:APT:GCVV::::::GVCDE::::S:::
HQ2360A         :TIST:SEMPTI:GSAES::T::T:T::::VIC:SN:::I:::::::::::REST:::I:
Hbo0410         :::QIDPTQ:P:::PAES::SA:A::::::V:C:::::::::G::::::::RTS:::H::
NP3206A         :::::HPE::R::R:::-::A:::::E::::::T:::::::::::::SG:D:AE::Y::S
HVO_1147        ::VSPA::TP::A-::::A:A:::E:T::::RVHGC:A:V::::VVG::::TLD:::RI:
Hut1413         ::TT::QSGEG:AR::::A:SR::E:GL:H:APV:T:::I::T:V:::::D:I:::::IS
hla2681         :TE:TSAT::P::::::-L:DV:A::P:A::::TD::::V::::::::::::::T:::::
rrnAC1427       :::T:::PTP::TS:PG:L::S::E:::::::SD:T:E::::T:::::::D--DT:::AS
Hmu1735         ::T:::D:AS::TP:PS:L::::DG:D:::::::::::G:::T:::::::T:RET:::AS

consensus       VVRFPDAPDRATDADVT-------VAVGADGGDADATL--SDRPASTAAFEVARALGTDP
#oth            254545454533243542211111332.54763223543163445443233322213353
VNG0789         ::SE:PSHSG:A:GSQAATPTASH:T::CEAVA:::SV::---TGVAD::AL::EV::H:
HQ2360A         ADQ:GH:NPTV::Q:DGCC:::::I:L:LSHPA::ININPVE:SVTRSVYA:TE::T:PT
Hbo0410         AGS:VSM::APD:DG:L:::::::L:::T:VS:::::VAPD:GAT:RR:Y:::A::TPAG
NP3206A         LAAV::P:--:::::C::::::::::::T::::VTV--:::ES:LAV::A:IV:S:AAEA
HVO_1147        AT---::::TVAHD::V:::::::AV::LSDA:::LE:::----DPND:VS:V:E::V::
Hut1413         ::QT:ADAA:::E::R:::::::::TL:PASQ:::L::G:::::::V:::G:::S:DAPT
hla2681         :S:--:PVPD:G:DA:A::::::::TI:::R:PHAIPG::LG:::::D::AI:::::V::
rrnAC1427       :::PFED:::T:ET:I::::::::I:I:RTQLT::V::::T::A:A::-::T::E:::-A
Hmu1735         :A:TGE:GA:T::::::::::::::S:::E:V::T:::::A:E:L::::V:TV:::::E:

consensus       D-------------------------PALALAGAVAAGV---------------------
#oth            4111111111111111111112233243111..443216111111111111111114221
VNG0789         :::::::::::::::::::::::::::VVTA:::::D:::::::::::::::::::::::
HQ2360A         HASESGVDTTDDVSGEDVNITIPPTDTL:::::IITT::SLETKSASNNQEQTQAQSQTT
Hbo0410         E:::::::::::::::::::::PGPD:V:::::I::::E:::::::::::::::::HPG:
NP3206A         V::::::::::::::::::::::::DAT::::::YC::Y:::::::::::::::::::::
HVO_1147        ::::::::::::::::::::::::::::V::::LH:::T:::::::::::::::::TP::
Hut1413         T::::::::::::::::::::DATDVV:::A::V::::D:::::::::::::::::::::
hla2681         :::::::::::::::::::::::::::VV::::V::::S:::::::::::::::::VPGT
rrnAC1427       :::::::::::::::::::::::::::::::::TI:::-:::::::::::::::::::::
Hmu1735         ::::::::::::::::::::::::::L:::::::TV:--:::::::::::::::::::::

consensus       DGDGDLADAAE-----DAG-VERRPGVAVPTADLADGLAHSTLVHAPFSGDREAARAALA
#oth            344353453111111152334323..113.352322...311.42121.11632261531
VNG0789         EPPA:VRA::::::::---AWT:::::G:::::::A::::::::::S::::EQ::G:F::
HQ2360A         ::S:FATSLL:TLTTT:TVS:DQQ:::GI:ISNVV::::::::M::S::::VD:TH:MM:
Hbo0410         AT::G:LSV:::::::ET:A::::::I:A:V:::::::::T::A::S:::::::VT:V::
NP3206A         EPE:W:---L::::::Q:::L::A::I:I::D:SIE:::G:::L::G::::G:::A::V:
HVO_1147        KE:T::::::A:::::::::::AG:::::::G:::::::::::::::::A:::R:Q:D::
Hut1413         EPT:A::::L::::::E:D:I::::::::::::::::::Y:::::::::::P:::::T::
hla2681         ::S::ALE::::::::HTDR:R::::::L::V:::::::A:M::RTSY:::S::::::::
rrnAC1427       :V::TV:E::::::::Q:::LDQ:::::::GT:::::::::::FV::::::ADE:::T::
Hmu1735         :::SGE:TL:::::::A:::F:::::::::VSEYV::::::::L::::::E:A:VED:IE

consensus       ELDLPAD----------------------LDDDAHRRLASLVALDAAEDE-ATPRAAEAV
#oth            22344332211111111111111111111323333123..21123236243135212512
VNG0789         ::G::PE::::::::::::::::::::::P:AA:R:::::A:::::TA:-::P:C::D::
HQ2360A         :I::DV:IDAHSSEGDDQGEFTDAVSLIN:S:EDQ:TI::A:TI:VIKASTP:VGT:ISL
Hbo0410         D:::::E::::::::::::::::::::::P::A:::T::::::::V:G:DD::V::::S:
NP3206A         D:ETADG::::::::::::::::::::::------:S::::A::S:V::-::P::::N::
HVO_1147        ::S:::E::::::::::::::::::::::::A::R::V:::::I::TSG::::A:::T::
Hut1413         :R:ALDP::::::::::::::::::::::K::E:RL:A::I:::T:V:GAD:DS::S:::
hla2681         D:G::::::::::::::::::::::::::::::::::::::::V:V:DA:G:ST:::S::
rrnAC1427       :::ISP:GP::::::::::::::::::::PSA:D::::::::::TVTT:-::P::::D::
Hmu1735         A:GSDD:::::::::::::::::::::::--T:R:::V::::::AI:G::T::D::T::I

consensus       ERALRPYATPGG--PFETVGGYADVLDAVARERPGTGVALAL----GH-DVREAALDAWR
#oth            22213.54223211222.21.11...2.32114..411.1111111122453451.31.1
VNG0789         HD::::R:::D:::MMA::E::::::N:::WAA::H::::G::::::V:AD:T:V:A::Q
HQ2360A         :Q::H:QYL:D::::MT:IE::::::R::S::::::AI:F:I::::S:::ASD:::S:::
Hbo0410         :::FK:::::DA::::T:L::::::::::::::::::::::::::::::ET:VP::E:::
NP3206A         Q:F:H:HS--VD::R:::L::F::::::::::H::S:I::::::::::::IE:T::E:::
HVO_1147        ::V:G:ET::N::::::::::F::::::TV::S:::A:::::::::::::::D:::::::
Hut1413         :DV:::::--:::::LT:I:::::::::A:::Q::VA:::::::::::EPAI:G::S:::
hla2681         :::::::::V:DAA::::::::::::::L:::A:::::::::DSDP:D:EL:A:::::::
rrnAC1427       Q:::::T:--::::::::::::::::::::::Q:::A:::::::::::EA:S:D::A:::
Hmu1735         ::::H::V--::::::::I:::G::::::::::::L::::::::::::DG:::Q:::V::

consensus       SHAQAAHAALRDATTGRYDGLFVAR----------------------------------G
#oth            4.1523.532351244.1312522321111111111111111111111222222222234
VNG0789         A::APS:::V:A:SLA:HR:VV::D::::::::::::::::::::::::::::::::::-
HQ2360A         E::::V:HI:QT:H::::::VYLL:CRDHDEFQDSSTTSGPDETSNTTESGRTETDSSV:
Hbo0410         D::A:::RT:SEGH::::E:VH:V::::::::::::::::::::::::::::::::::AT
NP3206A         ::G:R::E:V:S:SSS::::VS:V:::::::::::::::::::::::::::::::::::V
HVO_1147        D::::T:::::G::::::ES:SALS::::::::::::::::::::::::::::::::::C
Hut1413         T::ER::D:V::::VR:HA::V::E::::::::::::::::::::::::::::::::::-
hla2681         ::GL:::R::D:::I:::::CL:::V::::::::::::::::::::::ALAGGDRSEED:
rrnAC1427       :::TR::D:VSE::::::::::::::::::::::::::::::::::::::::::::::::
Hmu1735         T::SR::TGI:T:S:Q:::::::V::::::::::::::::::::::::::::::::::::

consensus       DAAPTG---L-TVARLARDFRSPEPVVLAVGDGAAALAATDDRD------------VAEA
#oth            24433422324...1.4321121.142112344322233546443222222111114445
VNG0789         --V::A:::SP:::::L::Y:AT::A:::::TET::::T::---::::::::::::----
HQ2360A         :ISTP:::R:L:::E::SRYQT::SL:::I:EEVV:V:TQPT::TQSTSTTVDAVV::::
Hbo0410         ::VA:HPGR:A::::::::::::::MA:VI:::V:::::VEHGAAR::::::::::A:S:
NP3206A         :G:APD::T:G:::::WFHY:::::T:V::T:::::VT:EGA--:::::::::::::ESP
HVO_1147        :LSSP:::R:A::::::::::::::T:::::V:::::VS:GPAG::::::::::::LD:D
Hut1413         T:G::::::-::::::V::::::::LA:VADGDR:T:::IA:H:::::::::::::ARAI
hla2681         ::::DAAAV:P:::::V:::::::::AV::DEA:GR:::AATGGGRAAGGA:::::T::P
rrnAC1427       ::M::::::-::::::FA:Y:A::::T:V:T:DR::AR:::G:::::::::::::::::T
Hmu1735         ::M:VE:::-::::::VAR:::::::T:V:AGNR::VRG::::S::::::::::::::P:

consensus       LA--------------------------AAASAV--GG----------------AVGTAD
#oth            452222221111111111111111111132365234144111111111111111551345
VNG0789         --:::::::::::::::::::::::::::D:H::LP:-::::::::::::::::S:::RR
HQ2360A         :RTNIDIETTDIPAENNAVSQMDSTTTP:ESDD:DD:ANAGDTGNDEINQMQDGW::D:N
Hbo0410         V:::::::::::::::::::::::::::DEFGG:DA:A::::::::::::::::WS:D:R
NP3206A         :R::::::::::::::::::::::::::E:TT:L::::R:::::::::::::::STARNG
HVO_1147        ::::::::::::::::::::::::::::::::DLPAAS:::::::::::::::::T:SPS
Hut1413         :D::::::::::::::::::::::::::S:TASIDHAEA:::::::::::::::VA:D::
hla2681         IGLGDACR::::::::::::::::::::S:::E:::::D:::::::::::::::GW::::
rrnAC1427       MH:::::::::::::::::::::::::::::ET:::::D:::::::::::::::::::G:
Hmu1735         :D::::::::::::::::::::::::::::TT:::::-::::::::::::::::--:::T

consensus       RATARFDAAAE--DI-------------IAAVREAL----
#oth            32652245344334311111111111113133.1353211
VNG0789         ::VTTLGDSSDADAV::::::::::::::ET::GG:::::
HQ2360A         Q:LV:VNSTVPPAE::::::::::::::::V:::LTREES
Hbo0410         ::VV::::DTPEAE:::::::::::::::::::::ST:::
NP3206A         HG::T:::S:T:::F:::::::::::::T::I::::::::
HVO_1147        E::MT::S:::PS:V:::::::::::::V:::::VRR:::
Hut1413         ::HLTVSG:T:::TL:::::::::::::V:::::VIADE:
hla2681         :GGIAVGT:D:ADR:EEREATDGDITGAL::L::::::::
rrnAC1427       ::R::::VSTA:::F::::::::::::::E:F:::V::::
Hmu1735         :TN:::EGD:D:::L:::::::::::::VEQ:::::::::