| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 3291 | HQ3056A | rrnAC2518 | Hmu3017 | NP1318A | VNG2110 | hla0504 | Hut2495 | HVO_0339 | Hbo1140 |
| 2322 | HQ3056A | 3576 | 1783 | 1844 | 1910 | 1819 | 1934 | 1961 | 2161 | 2137 |
| 2312 | rrnAC2518 | 1783 | 3138 | 2199 | 2002 | 1844 | 1845 | 1925 | 1929 | 2008 |
| 2346 | Hmu3017 | 1844 | 2199 | 3287 | 2000 | 1928 | 2081 | 2050 | 2064 | 2022 |
| 2344 | NP1318A | 1910 | 2002 | 2000 | 3313 | 1978 | 1969 | 2109 | 2100 | 2093 |
| 2268 | VNG2110 | 1819 | 1844 | 1928 | 1978 | 3315 | 1936 | 1973 | 2067 | 1960 |
| 2420 | hla0504 | 1934 | 1845 | 2081 | 1969 | 1936 | 4168 | 2011 | 2254 | 2128 |
| 2459 | Hut2495 | 1961 | 1925 | 2050 | 2109 | 1973 | 2011 | 3284 | 2212 | 2129 |
| 2699 | HVO_0339 | 2161 | 1929 | 2064 | 2100 | 2067 | 2254 | 2212 | 3281 | 2348 |
| 2570 | Hbo1140 | 2137 | 2008 | 2022 | 2093 | 1960 | 2128 | 2129 | 2348 | 3378 |
576 symbols consensus -----------------------------------------------------------M #oth 111111111111111111111111111111111111111111111111111111111112 HQ3056A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2518 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::- Hmu3017 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::V NP1318A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG2110 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla0504 MVEISGSPYICVVSAVCARNARPLAIFLIGVSMQLYISWSAVTPSAPRNRFVRERERAR: Hut2495 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::V HVO_0339 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo1140 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus TVIGLDDTDSRTRGMCTTYLATRIAEAIEAAGG-TVERRLLVRLNPAVEHKTRGNAALAV #oth 22223111111341....121322.3323321315.4.3..1.11...21.......2.2 HQ3056A ::::I::::::N:::::::::::::T:::H:::::::::::I:::::::::::::::I:L rrnAC2518 --------------:::::A:ATL::S:RN::::::::L::::::::::::::::::::: Hmu3017 ::::::::::::E:::::FA:::L::R:::::::S:Q:T:::::D::::::::::::::: NP1318A ::::I::::::E:::::::V:DT::R:LAD::H:E:R:V::::C:::::::::::::::: VNG2110 ::VA::::::::A::::::A:HLV::ELR:::C:::H:V:::::::::AY:::::::::: hla0504 PIVAV::::::E:::::::VGA:L::RLD:::::R:R:::::::::::K::::::::V:L Hut2495 ::::I:::::::A::::::::A:::DRLA:TDDWV:D::::::::::::Y:::::::::I HVO_0339 ::::::::::::L:::::::::LV:::V::R::::::::::::::::::::::::::::I Hbo1140 ::V::::::::E::::::::::LV::::::::::Q::::::::::::::Y:::::::::L consensus H-TDLDADAALDLAREELDALAETDDPRTNPGVVVA-------PCDPDA----------- #oth .13233245243235352356.432.11.1..2121111111154315411111111111 HQ3056A ::::I:PTD:VEISTQFI:S::IS:::N:S::::IT::::::DT:T:HS::::::::::: rrnAC2518 ::::::::T::G::EDV:-DM:::::::::::AI:::::::::D:::ED::::::::::: Hmu3017 ::C:VS::R::::GADA:-:M:-A::::::::L::::::::::D:::T:::::::::::: NP1318A ::S:APVE::SET::DIVESA:::A:D::::::::::::::::EGP:E:::::::::::: VNG2110 ::A:V:PQVGF:T::RVV::H:::::D::::::::::::::::-H:A::::::::::::: hla0504 :VSGVE:E::F:::A:TVREF:AA:::::S::::::DIDVAGD:S::S:SAPPFPPSAAS Hut2495 ::::APV::VREIVS:::-PI:::::::::::::L::::::::SESAAE::::::::::: HVO_0339 :::::P:G::F::::::::RW:VL::D::S::::::::::::::GS::T::::::::::: Hbo1140 :::N:SPEEV:AI:V:::EP::::S::::S::::::::::::::G::::::::::::::: consensus ---VPAAVADFARRAIRDFHDLADAVALADRVGYRHAGWGN----------GRGRIGALA #oth 1112244.43133412.5543543154212542174744331111111111...21.... HQ3056A ::::ADS:I::CWD:::E::TI::T:D:IEQ:::H:Q::DG::::::::::::::::::: rrnAC2518 :::::PQ::T:::ET::SIQ:PMA:TT:::V::FARCQR:::::::::::::::LV:::: Hmu3017 :::::E::::HS:A:V:ELL:VET:RRRIADA:FESTTV:::::::::::::::L::::: NP1318A ::::::S:QS:S:T:::GH:ERH::H:VI:S:::QAH::K::::::::::::::V::::: VNG2110 :::-::P::A::H::L:ADI:P:::A:::AAH:::T::::T:::::::::::::VV:::: hla0504 TAPI::D::::::::L:HRLS:DE:LT:::DH:F:::AF:SGGETNTEAVA::::::::: Hut2495 :::I:E::G::::D:V:::::V:::R::I::LE:DTLEA:::::::::::::::L::::: HVO_0339 ::::ST:::::::D:V::::::D::::::E:S:FLTE::HG::::::::::::::::::: Hbo1140 :::::D::SS:TT::::SLV:TD:::E:::SAD:F:R::DG::::::::::::::::::: consensus AVGAWAAFDDWTYEHIAYRERDRCGTPRDVDIESVFAAADRAYPEVWDTVDRVEGEAVCV #oth .1..131141..2.3.3..234.2.14.4.262..13..344..31.....232133... HQ3056A :::::::LTE::I::::::QFN::::D::::EK:::E::K:Q::A:::::::E:DD:::: rrnAC2518 :::::::LS::::::::::::::W::E:A::S:::R:::EEY::::::::::AS:YP::: Hmu3017 :::::R::G::::::::::::::W::E:S::TD::::::::H::T::::::HAS:YP::: NP1318A :::::KTL::::::::V:::PS:W:SD:::SV::::D:::SY::::::::::GT:::::: VNG2110 :::::T::S:::::C:Q::P:::W::T:R::AD:::::::D:::AA:::::H::DDL::: hla0504 ::::P:::::::V:R:S:::L::::::::::::::::::::G::T:::::::GT:::::: Hut2495 :L:::R::E:::::Y:S:::PP:R::::E:GP::::R:::AG::DA:::::H::D:L::: HVO_0339 :::::::::E::::::S:::FH::::::E::VD:::D:::A:::DA::::::E:::G::: Hbo1140 :::::::LEE::::::::::F:::::L:::::::::D::ADH:::A:::::T:::Q:::: consensus PNAPGPILYGIRGDDPDAVRAVAAAIDSEPVERRATFVTNQGTDAHLRDGTLGALRDGRA #oth .31.1.1.1......2421242123.3...332331.3......3..2313233221241 HQ3056A :::::::::::::::VA::KT:::E::::::::SS::I::::::I:::P::I:S:::N:: rrnAC2518 :RT:C:::::::::::T:C::::D::::::IA::::::::::::V::Q:A::D:VTADS: Hmu3017 :RT:C:::::::::::E:C:S:::::G::::D:TR::::::::::::QSAP:D::T::S: NP1318A :KT:::V:::::::::E:C:::::N:::::ADSER:::::::::G::Q::AV::A:::Y: VNG2110 :HT::::::::::::A:::Q::::D:::::PHA:EL:::::::::::A:AP:ADA::::G hla0504 ::::::::H::::::AN:C:EI:EE:A::::::T:::L:::::::::AP:AI:D::::AG Hut2495 :H::::::H::::::::V::G:::D:E:::I::T:L::::::::::::Q::I:T:::::: HVO_0339 ::::::::H::::::A:T::E::::::::::D:S:::R::::::::::::VVSD:::::: Hbo1140 ::::::::H:::::::::::SLS::::::::::::::L::::::I::::::::S:EADG: consensus YRVTGTVAEAPETRRGGHVFFTLEGD--------------DATV---------------- #oth ..24.1.3451..13....12324442222222222222224531111111111111111 HQ3056A :::::::ITD::::P:::::V::GKRETTEEDHIEETSSKESA:LTDTHHLRTKSSNPDI rrnAC2518 :::::::V::S:::A:::::L:::::::::::::::::::G::L:::::::::::::::: Hmu3017 ::TD:::V:P::::E::::::::ADG:::::::::::::::::::::::::::::::::: NP1318A ::LS:::::::::::::::::E:V::::::::::::::::GDGT:::::::::::::::: VNG2110 :::E:V::DH::::E:::::VPITDG::::::::::::::E::L:::::::::::::::: hla0504 :::A:V::SE:::K:::::HVDVAAPD::::::::::::::DR::::::::::::::::: Hut2495 :::::V:DAS::::E:::::L:I:::D:::::::::::::GHAL:::::::::::::::: HVO_0339 :::A::::SD:::::::::::D::AG::::::::::::::::V::::::::::::::::: Hbo1140 :::D:V:VA::::::::::::E:GSADKRGDADNGVDGDP:ESI:::::::::::::::: consensus ------A---CAAFEPTKRFRDRVRALRVGDRITVCGE-----VGD-------------- #oth 111111422311..1..11..22..4.13..42.1...1111133111111111111111 HQ3056A TDQNVSSTIT:V:::::::::QW::K:::::I::::::::::::SN:::::::::::::: rrnAC2518 ::::::D:::::::::::G::N:::S:KA:::::A:::::::::T::::::::::::::: Hmu3017 ::::::E:::::::::::::::::::::P::VL::::::::::::::::::::::::::: NP1318A :::::::TLQ:::::::::::::::K::::::::A::::::::CT::::::::::::::: VNG2110 :::::::::::V::::::::::H::N::P:::::A:::::::::A::::::::::::::: hla0504 ::::::PRLR:V::K::G::::::::::P:::V:::::HEVRLI::SGGAEDDGNDGPDS Hut2495 ::::::P::::::::::::::::::S::::::V:::::::::::S::::::::::::::: HVO_0339 ::::::::::V::::::::::N:::::::::A::A::::::::::::::::::::::::: Hbo1140 :::::::::::::::::::::::::T::C::EL::::::::::FS::::::::::::::: consensus ----GTLKLEKFAVRDLVRTEPVTPTCPDCGRTMESAGRNQGYRCRDCGTSAPGKAERSI #oth 11111........2.3122.1422.4..2.311.2...13........3.4331232452 HQ3056A :::::::::::::I:S:T::TKTA:I::G:N:::K::::::::::::::::SSTQS:K:L rrnAC2518 :::::::::::::::::::::A:::D::::::S:K:::::::::::::::::D::TAQ:: Hmu3017 :::::::::::::L::P:Q::L:::E::A:::S:S::::D::::::::D:NRD::V::PL NP1318A :::::::::::::::G:::::R:::V::::E:::::::AG::::::::::A:E::::QPL VNG2110 :::::::::::::::G:T::T:T::V:::::T::::::AT::::::::S:T:::T:H:L: hla0504 GQSTA:::::::::::::E:::AV::::::::S:S::::G::::::::::D::::V:E:: Hut2495 :::::::::::::::::::::R::::::A::::::::::G::::::::S:AVD:::::E: HVO_0339 ::::::::::::::::::::::A::V::::::::K:::::::::::::::D::::V::AV Hbo1140 :::::::::::::::E:N:::L::::::::D:::::::::::::::::R::::::T:SV: consensus DRDLEPGWYEVPPCARRHIAKPLVRGGFDAPVHPER #oth 3.41241......3....1.1..1..11.1131.11 HQ3056A ::V:SLK:::::::::::::Q::I::D::::IM::: rrnAC2518 E:G::R:::::::V:::::::::::::::::T::S: Hmu3017 A:EI:::::::::V::::V::::::::::G:C:::: NP1318A S::::I:::::::R:::::::::::::::::::::S VNG2110 E:A:D:::::::::::::::Q:::::DW::A::::: hla0504 ::E::::::::::S::::V::::::::::G:I:::: Hut2495 :::::V:::::::::::::::::::::::::::::: HVO_0339 ::::::::::::::::::::::::::::::AT:::: Hbo1140 :::::R::::::::::::V:::::::::::::::::