|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1933 | VNG0309 | NP3160A | Hut1878 | hla1971 | HQ1156A | HVO_0790 | Hbo0745 | rrnAC1881 | Hmu0826 |
1462 | VNG0309 | 1960 | 1167 | 1226 | 1366 | 1287 | 1338 | 1234 | 1281 | 1185 |
1452 | NP3160A | 1167 | 1937 | 1207 | 1326 | 1286 | 1328 | 1327 | 1397 | 1260 |
1475 | Hut1878 | 1226 | 1207 | 1774 | 1382 | 1310 | 1377 | 1305 | 1309 | 1293 |
1686 | hla1971 | 1366 | 1326 | 1382 | 1943 | 1418 | 1526 | 1410 | 1497 | 1330 |
1558 | HQ1156A | 1287 | 1286 | 1310 | 1418 | 2017 | 1510 | 1520 | 1342 | 1255 |
1647 | HVO_0790 | 1338 | 1328 | 1377 | 1526 | 1510 | 1979 | 1574 | 1376 | 1258 |
1558 | Hbo0745 | 1234 | 1327 | 1305 | 1410 | 1520 | 1574 | 1954 | 1403 | 1263 |
1555 | rrnAC1881 | 1281 | 1397 | 1309 | 1497 | 1342 | 1376 | 1403 | 1964 | 1408 |
1469 | Hmu0826 | 1185 | 1260 | 1293 | 1330 | 1255 | 1258 | 1263 | 1408 | 1798 |
276 symbols consensus --------MDAGLSARLNRISTDGRYLIVPMDHGITLGAVDGLVDIESTIDAVTRGGADA #oth 111111233341351113122132222321....1.1.113..2.1.2.1221.41...1 VNG0309 :::::::MT:::KT:::::::::D:L:TI::::::::::I:::::::A::RE::AN:::: NP3160A :::::::::TP:IA:::D:VG:::::VV::::::::::::N::K:::::::::::::::S Hut1878 ::::::::----------------------::::L:M:P:T::E:L:::VEGI::::::: hla1971 :::::::::T::::::::::::ND::::::::::L:M::::::::::::::G:::::::: HQ1156A MNTGAGAGARS::I::::::::::::::::::::::::P:K::::L:::V::I:DN:::: HVO_0790 ::::::MNT:V::::::D::::::::::::::::::::P:T::::::::::GI::::::: Hbo0745 ::::::::::V:IT:::E::::G::::V::::::::::P:K::::L:T:V::I::::::: rrnAC1881 :::::::::T::KR:::E::G::DT:V:I:::::::M:::K::K:::A::::::S::::: Hmu0826 ::::::::----------------------::::::::::::::::::::::::T::::: consensus VLTQKGIADRVHPNKNDAGYIVHLNGSTTIGPDENDKRLTGTVEDALRAGADAVSFHINV #oth ...12.2.4...212121..11.1.1..41...34...6.111.3.2.1...1....1.1 VNG0309 ::::P:::P::::::G:::::::::A:::L:::QT:::R:::::::V::::::::::::: NP3160A ::::::::::::G:::G:::::::::::A::::S::::A::S::A::::::::::::::: Hut1878 ::::::V:::::G:L:G:::::::::::::::::E:::K:::::::V::::::::::::: hla1971 ::::::::P::::::::::::::V::::::::::S:::V:A:A:::V::::::::::::: HQ1156A ::::R:V:S:::::::TK::::::::::V::::TT:::P::S::G:::::::V::::::I HVO_0790 :::H::T:P:::::::GK:::::V::::D::::::::::::S::::::V::::::::::: Hbo0745 ::::::V:R::::K::GK::::::::::V::::S:::::::S::E:::V::::::::M:: rrnAC1881 ::::R:::G::::::::::::T::::::::::::Q:::T:::::::I::::::::::::: Hmu0826 ::::R:::::::E:T:::::V:::::::S:::::S:::P:::::::I::::::::::::: consensus GSDHEPDQITQLAELTAEAARYGLPVLAMAYARGPGIDEQDPE----SLGHAVRLAEELG #oth ..32.11.222.231255.53213.....3....2112351221221311....11..11 VNG0309 ::::::::::A::DVA:D:D:L:V::::::::::::V::H:AA::::N::::::::::V: NP3160A ::KY:RE::EA:GR::DQ::E::::::::T:::::D:EGD:::::::A:::::::G:::: Hut1878 ::EY::::L:::::V:G::E:L:M:::::::::::::::S::D::::::A::::::::V: hla1971 :::::::::EE::::::D:S:L::::::::::::::V::T:::::::::::::::::::: HQ1156A ::::::::L:::SN::E::H:::I:::::N:::::::::H:::::::::A::::I::::: HVO_0790 :::Y::::M::::D:CSR::DFSV:::::S:::::::::::::::::A:A::::::::V: Hbo0745 ::EF::::M:::G:::EK:H:F:::::::N::::QD::S::A:::::N:A:::::::::: rrnAC1881 ::QY::E::EE:S:::T::SQ::::::::::::::D::SENED:YNE:V::::::::::: Hmu0826 ::E:::E::S::S:V:SA:RE:::::::::::::HDVRDE:::LFAED:::::::::::D consensus ADVVKTAYSGDAESFERVVEATALPVVIAGGSKGTDRETLEMVRGAMDAGAAGVSMGRSI #oth ..21..2.1.3311.32.321131..2....1221.2212431.111.11.1.1.1..11 VNG0309 :::I::::::ST:::Q:::D:::K::I::::DPAG:::::QGI:D::::::::::T::TV NP3160A ::LI::G:::::::::H:C:S:S:::L:::::PDG:L:S:RD::::::::::::::::T: Hut1878 :::I::::::::D:::::AA:S:K::::::::::::E:::A::::::::::::I:::::: hla1971 ::::::G::::GD::A::T:S:R::::::::::::::D:V::::::::GD:::::::::: HQ1156A ::::::::::EP::::Q:CA::Q:::::::::R::::Q:I::::::I::::::::::::: HVO_0790 :::::::::::::::G::::::R:::::::::R::::::V:::::T:::::::::::::: Hbo0745 ::::::S:T:E::T::::C:::R:::::::::R::::Q:I::::::::G::::::::::: rrnAC1881 ::I:::G:T:S::T:QH:::S:S:::::::::::::ED:VR::::T:::::S:::::::: Hmu0826 ::L:::::::TP:T::::::S:::::L:::::::::E:::DI:::::::::::::::::: consensus FQHEDPEAITRAVSAVVHDDASVEEALRAAGLAVEA #oth ...24.14111.112.1.2133323.1641116323 VNG0309 :::AT:G:M:A:I::::::::DP:A::AR:::V:D: NP3160A ::::S::H:A::::L:::::Y:A:A::E::E:SK-- Hut1878 :::::::::::::A::I:::E:::::MGN:::R::S hla1971 :::::::G:A:::::::::::::D:::T:G:F-::: HQ1156A :::DN:GS::::::::I::G:::DT::DI:::EI:V HVO_0790 ::::N:::::::::::I::::D:DT::ER:::GI:: Hbo0745 :::D::::::::::::I:R::DT:T::HE:::GL:: rrnAC1881 :::DE::K:A:::::::::::TT:::::E::::::: Hmu0826 ::::E::K:A:::AS:::E:SEAAD:::::::::::