|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 3593 | VNG0650 | HQ1649A | hla0218 | HVO_0990 | Hbo0451 | NP2316A | Hut0500 | rrnAC1272 | Hmu1704 |
2135 | VNG0650 | 3551 | 1509 | 1571 | 1780 | 1666 | 1573 | 1704 | 1680 | 1749 |
2087 | HQ1649A | 1509 | 3659 | 1512 | 1763 | 1956 | 1465 | 1548 | 1586 | 1598 |
2238 | hla0218 | 1571 | 1512 | 3557 | 1853 | 1934 | 1635 | 1593 | 1672 | 1703 |
2529 | HVO_0990 | 1780 | 1763 | 1853 | 3625 | 2249 | 1673 | 1786 | 1876 | 1848 |
2553 | Hbo0451 | 1666 | 1956 | 1934 | 2249 | 3660 | 1694 | 1826 | 1755 | 1811 |
2190 | NP2316A | 1573 | 1465 | 1635 | 1673 | 1694 | 3595 | 1666 | 1751 | 1838 |
2284 | Hut0500 | 1704 | 1548 | 1593 | 1786 | 1826 | 1666 | 4057 | 1902 | 2062 |
2297 | rrnAC1272 | 1680 | 1586 | 1672 | 1876 | 1755 | 1751 | 1902 | 4269 | 2413 |
2409 | Hmu1704 | 1749 | 1598 | 1703 | 1848 | 1811 | 1838 | 2062 | 2413 | 3679 |
595 symbols consensus MVRRLVLGCGPAARALVEQLAERRGELTVLTQDEGRADSLRDDG-IAAREADPTDPSALP #oth 173..21.3235356322434353141424442352322116441153554222133334 VNG0650 ::S:::::::TVGH:VIGS::D:::::F:FDG::S:V::::NES:V::EVR:V:::A:IT HQ1649A :N:::L::::::VHDA:::FID:S:H::IV::H:TVFE:FNGED::DHTQ:N:D:STVY: hla0218 :A:::L:::SAVGNT:::RTR:A::::IAI:D:T:W:ST:::RN:V:TV:::::::ATY: HVO_0990 :::::I::::SLGGG::G:::G:G:TV::V:DRQ:::ED::S::::::::G::A:::TY: Hbo0451 :Q::::::::S::QRA::R:::WP:T::::S:RS:VV::F:::::VS:ERCA:::HE:F: NP2316A -MD::::::A:GT:QF::::::QPAS:L::VG::A:::T:::S:::DT:VV:::::A:IR Hut0500 :RT:::V:S:SI:::VIGS:C::P:R:LATGS::-:E::::EN:AVEVLAV:::VH:Q:A rrnAC1272 :LS:::::L::T:AD:LDAISDD::::A:V::::H::ET::A::::NVL:::QA:::V:A Hmu1704 :TS:::::A::LV:S:LDE::AG:::V::::E::H:V:T::T:A::TVQL:::A:R:V:S consensus E---DVDMVVVASDD-AARNAAAARAARRAFPDAFLLAYVGADADPD-------VREALD #oth 53354224131132512431343.6111552.2151223417533641111111534325 VNG0650 LPDRS:::::::GER::D::RL::I::DA:H:::G:VV:L:F::T:K:::::::D:HRI: HQ1649A P:::TA::IFI:::E::KQ::IT:ET::TE::NTHITSF:P:T:SQK:::::::I::RIN hla0218 ::::SAAV:L::::::P:::V:::E::::HY:::MIV:H::TNPTAA:::::::QQ:::E HVO_0990 D:::E::L:::GGGQSPQ::LD::::::DHY:::P:VV:L:D::::S:::::::::ADIY Hbo0451 ::::E::V:F::::::::A:LDV:LT::ER::::Y::::::S:::H::::::::T::::: NP2316A TVAG:AAS::::PEA:SPEA::I:D:::S:Y::T::::CF:RQPSEP:::::::::SEVA Hut0500 :VEA::ET::::::N:P:E:LVV:::::::::S::::V:A::TVQD:RIGQRAERLAE:R rrnAC1272 DLDFHPESII:::E::PKQ::D::T:::DC:::::::::A:HG:TT::::::::Q:DR:: Hmu1704 SLDVTPET:F::VG:::K::::V:Q:V:SV::S:M:V::S:LET::A::::::::DD::E consensus SVADRVVDPRAALTDRLNDAVGEGGA-RLRRLRRVLRDIDGPLAVVMHDNPDPDAIASAL #oth 51112111244334234544326525434441531.342213.2111..1......1112 VNG0650 :::::::::G:E:LSHA:SLTES:ASQ::QA::QT:QG:::R:G:F:::::::::::A:V HQ1649A C:SNH:I:A:Q::VS:F::ILTHP::RQ:HQ:FTT:::::DT::I::::A:::::::::: hla0218 A::::::::VE:VVS:VCE:T:VDADEEPV::L::::SLT:::L::A::::::::::::: HVO_0990 DL::E:I:::RVV:E:IL::::TSHTE::N::M::::NV::R:::::::::::::::A:: Hbo0451 EL:::L::G:RI:::::TELTEGAA:D::H::F:::KSLS:::::::::::::::::::: NP2316A A:::::::GL:ETR:K:LA::::::L::T:K:QH:::T::::::::A:::::::::G::I Hut0500 :::::::::GTV:DSY:E:RIET::I:SIHEF::::E:V::T:::::::::::::::::I rrnAC1272 :::::L:T:ETVV::YVTQS::DE:T::A:Q:HQ::::::DH:::::::::::::::::V Hmu1704 H::::::::G::I::H:MER:::A:L::T:Q:Q:::::V::T::::::::::::::::GV consensus ALARIAERAGCDADACYYGEISHQENRALVNLLEFDLRNLDADA--DLDEYDGFALVDHS #oth 1.531.242133334..2.2.3..1...2....121.43215461134341222.....1 VNG0650 G:Q::::D::V:SQ:::F::::::::::F::::::::::VETQS::-DA:F:AV:::::: HQ1649A :::EL:DN:DI:::L::::S:::::::::::::DI::L:FERET:::VE:::SI:::::: hla0218 G::::::SV:IP:::::G:::A::::::M::::DLS::TF:-GI:::::D:G:V:::::: HVO_0990 ::QA::::::V:::V::F:D::::::::::::::L:::V::EVP::AD:::A:::::::: Hbo0451 ::V::::SV:L:::P::F:D:::::::::::::DI::V::ERGE:::T:D:G:I:::::: NP2316A G:K::::A::VE:T:::::D:N::::::::::::::::S::::C:::PSSFG:I:::::: Hut0500 ::VQ::::L::S:E:::::S:N::Q:::F::::DL::TS:EP:::::::V:G:::::::A rrnAC1272 ::GAL::::D:EVTI:::::::::::::F::::::::::::::SPDE:EAF:A::::::: Hmu1704 ::S:L:QAV::ETEL::::::T::::::F::::::::Q:::::::::::A:::::::::: consensus RPGVNDGLPPDTPVDIVIDHHPPRAPVEARFVDLRSDVGATSTLLADYLRRLGIDPDETV #oth 11.2..3.132241.1.1.....142141412.1.232...1.1433..32423524352 VNG0650 G:::::Q:A:::D::::::::::TTD:D:G:T:I:P:T:::::I:VE:::GY:::VRTA: HQ1649A ::::::::A:::T::::V:::::::T:::S:::I:RN::::::IF::::::INAA:T:S: hla0218 :A:I::S::EGH:::::V::::::G::AGE:::I:P::::::::IEE::S:V::E::RDL HVO_0990 ::::::R:::E:TI:V:::::::::::::AY::::RG:::::::::E::E::::V::T:: Hbo0451 :::::::::K::E::::V::::::::::::YL:::REL::::::MTN:::::::E::A:: NP2316A :::A::::::EADI::::::::::Q:IQ:::::::::::::C::V:G:::E:::PI::NL Hut0500 :::::::::G::A:::::::::::G::T:A:T:::::::::::::V:::::FDV:IE::: rrnAC1272 :A::::Q:::E::I::::::::::V:I:::::::::G::::::::V:::Q:FNV:IPTPI Hmu1704 ::::::Q:::E::I:::V:::::::::::::::::::::::::::::::::FDSLVE:A: consensus ATALLFGIRVDTNDFTREVSAADFEAAAWLLPHADLDTLQRIESPSMSAETLETIARAIQ #oth .11..1..32..42.3.22263..1.1.5.34411545.211.3.122221231234116 VNG0650 :::::Y::::::D::A::ITPR::T:::::::N::T:V:E:::A::L::D:FD:::AG:R HQ1649A :::::::::T:::::A:::::::::::::::T::N:S::DNV:::Q:TSGV:::LSS::: hla0218 :::::Y:::I::K::::AT:IP::::::S:S::::ES::E:V::::V:P:::RVL::::E HVO_0990 ::::::::Q:::::::::::T:::::::F:I::V:V:L:E:V:T::LTS::M::L:::VS Hbo0451 :::::::::I::R:::::::SD::::::::VSY:::S::::V:::::GP:V:D:L::::: NP2316A :SG::Y::WT::QS:S:G:AR:::::::A:IET::REA::::::::VT:G::::VQ:::S Hut0500 :::::::::::::E:S::::V:::::G:F::RE:::GM:E:::D::::SD:F::::D::H rrnAC1272 ::G:::::Q:::K::R:::A::::::::H:VTN::MA::::::D::V:P:::SV:G:::T Hmu1704 ::G:::::S:::RE:R::::VD::::::Y::::::::I:::::D:::::D::D::GH::A consensus NRDVRGSVLASCVGEIRDRDALAQAADRLLNMEGVATTLVYGYKDGTIYVSARARGADLD #oth 1.2331321312..3233..2.1.11121.314117414.2.56121114.1.1.2322. VNG0650 ::QLN:::::::::Q:TA::T:::T:::::A:R:::V:F::::F:::::::::S:RK::: HQ1649A ::::::NA:::N::S:T:::S::::::HV::LK::KIAI:::WI:D:V:L:G::::V:I: hla0218 G::::::TV:::::::G:::::S:::E:::DLD:I:V:F:F::M::V::G:::::::::: HVO_0990 ::::::N::TTN::D::E:::::::::H::G::::EV:V:::LM:::V:::G:::::RV: Hbo0451 ::::::D:::TN:::::N:::::::S:H::::::IRL:V:::F::::V:::G::::T:V: NP2316A ::T::DD::VT:::QVS:::::S::::K::::QDIS::::C::T:E:VFI:::::A:::: Hut0500 :::RH:T::L:G:::L::::T:::::::::A:D::T::::::INA::::I:::S::T::: rrnAC1272 :::QE::::LTG::::S:::::::::::::DL:::Q::M:::VV::::::::::::::I: Hmu1704 ::QRE::::L:::::LS:::::::::::::DLQ:INS:::::V::::::A::::::TEI: consensus LGETLRDAFGQIGSAGGHADMAGAQIPLGILDDVGDDS-ESLEEVVEDVVAGRFFEALE- #oth 1.131.3.1242.......11....221143664422353326531323135.2122245 VNG0650 ::AV::S::DDL:::::::::::::L:::LF:A::E:AATT:T:MI:E:::S::::EVHG HQ1649A ::::::S:L:TV::::::::L:::::::DA:NLAQEE:TDDHYATIS:A:ST:V:G::DN hla0218 V::L::::LDPV:::::::T:::::V:::::QE:SES-:::::D:::AF:::::::::DD HVO_0990 :::AF:E:L:S:::::::::::::::::::::::::::R:::ATI:T:I::::V::T::H Hbo0451 ::::::::LSP::::::::::::::::::::A:::PE:R:::SR::T::IS::L::T::D NP2316A ::::::E::::::::::::::::::::V:::L:DA:E-:RERRS:I:::ITE:::::VG: Hut0500 ::::::A::::::::::::::::::LD::VMETIS::-:DD::AI::EI:TD::LD:M:V rrnAC1272 :::A::::::::::::::::::::::DV:MITV--::RE:::::I:RAI:SN::LD:VQ: Hmu1704 :::V::E:::::::::::::::::::T::V:ESI-E:RD:::H:::RA::DD::LD:VQ: consensus AT-----PSPE----TDLAFEYPRDE---------------------------------- #oth 424431154451111454543346665314222212222222222222222222222211 VNG0650 G:SGI::QQG:::::-----------:::::::::::::::::::::::::::::::::: HQ1649A K:TV:::LE::ESGS:VEP:QF:QKTQ::::::::::::::::::::::::::::::::: hla0218 :-::::::::P:::::GPLP:FS:E-:::::::::::::::::::::::::::::::::: HVO_0990 ::PT:::::LD::::::V:::::L:::::::::::::::::::::::::::::::::::: Hbo0451 ::RTFGASES:::::R:::::F:P::W::::::::::::::::::::::::::::::::: NP2316A --:::::MT:D::::-YVP:V:ADTFGGVE:::::::::::::::::::::::::::::: Hut0500 YPSQL::::ES::::YGEGT:L:D:AAPVSPQLGSGRRNGVAENRPEDTVDRYRVDDTDG rrnAC1272 --:::::SRSH::::RL:GRV:A:ADYDVAAFTESTALSQDSDDTSATAEGASGEAGDDG Hmu1704 --:::::AR:N::::HL:SPV:TAPRYGVT::::::::::::::::::::::::::::DG consensus ------------------------------------------------------- #oth 3322212222323122221211111111111111111111111111111111111 VNG0650 ::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ1649A ::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla0218 ::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_0990 ::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo0451 ::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP2316A ::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut0500 ETETRSTDGSDTVGDDNDGT::::::::::::::::::::::::::::::::::: rrnAC1272 TADWNSDVMFLENGDEDGGDEPDQAADAAEPTDDEAEQGEDSPETLVEPDDGEPL Hmu1704 YLD:::::::VEDGEE:::::::::::::::::::::::::::::::::::::::