| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 3160 | hla1443 | Hmu0277 | HVO_1797 | Hbo1699 | HQ1121A | NP0670A | VNG2512 | rrnAC2133 | Hut2600 |
| 2410 | hla1443 | 3167 | 2191 | 2213 | 2270 | 2106 | 2195 | 2085 | 2225 | 2198 |
| 2566 | Hmu0277 | 2191 | 3250 | 2272 | 2339 | 2222 | 2370 | 2271 | 2401 | 2433 |
| 2582 | HVO_1797 | 2213 | 2272 | 3163 | 2446 | 2285 | 2378 | 2264 | 2419 | 2407 |
| 2812 | Hbo1699 | 2270 | 2339 | 2446 | 3344 | 2720 | 2425 | 2367 | 2537 | 2514 |
| 2617 | HQ1121A | 2106 | 2222 | 2285 | 2720 | 3156 | 2327 | 2276 | 2430 | 2370 |
| 2641 | NP0670A | 2195 | 2370 | 2378 | 2425 | 2327 | 3170 | 2404 | 2531 | 2542 |
| 2611 | VNG2512 | 2085 | 2271 | 2264 | 2367 | 2276 | 2404 | 3177 | 2537 | 2444 |
| 2742 | rrnAC2133 | 2225 | 2401 | 2419 | 2537 | 2430 | 2531 | 2537 | 3177 | 2541 |
| 2744 | Hut2600 | 2198 | 2433 | 2407 | 2514 | 2370 | 2542 | 2444 | 2541 | 3152 |
446 symbols consensus ------------MDLRFLGGAREVGRSAILVNDSLLLDYGMLTGNPPQFPVGTPEPDAVV #oth 111122222222.322.....3.1....2.1222..1.1.33233...1.24214.1... hla1443 :::::::::::::EVE::::::::::::V::D:A::I:::L::AD:::Y:LRD::::::: Hmu0277 MDKKRQRCDGRS:QVE:::::D:I::::V:IDG::::::::ASES:::Y:::DVD::::: HVO_1797 :::::::::::::K:Q:::::E::::::::::::::::::::::::::::::SV:::::: Hbo1699 ::::VRLAIKSN::I::::::::::::::::::R:::::::::::::::::D:::::::: HQ1121A ::::::::::::::I::::::E::::::::I::R::::::::::::::::IE::R::::: NP0670A :::::::::::::E:Q:::::G:I::::V:::G:::::::IQ:AT:::Y:::DV:::::: VNG2512 ::::::::::::::::::::::::::::L::GE:::::F:TKADT::::::S::T::::: rrnAC2133 ::::::::::::::VQ:::::D:I::::V:IDE:::::F::::DS::::::R::S::::: Hut2600 :::::::::::::K:::::::G::::::::::E::::::::K:ET::::::::VD:E::: consensus VSHGHLDHVGAVPSLLSGDRRPPIHWTPPTRELALTLARDTLKLH--------------- #oth 1.......1.21.1.11.242.21...1..411.21..1.....1111111111111111 hla1443 :::::::::::::A::K:::::T:::::::AAI:RV:::::::::::::::::::::::: Hmu0277 :::::::::::::A::::TEQ:TV::::::::::::::E::::::::::::::::::::: HVO_1797 ::::::::::T::::::::DW:AV::::::D:::R::::::::::::::::::::::::: Hbo1699 ::::::::::::::::::::::::::::::::::::::::::::RGISGRGATGGSQGQR HQ1121A :::::::::::I:::::::::::::::A::Q::::::::::::::::::::::::::::: NP0670A ::::::::A::::::::::::::::::::::::::::::::::::::::::::::::::: VNG2512 A:::::::::TI:A::::TH::::::::::Y::::::::::::::::::::::::::::: rrnAC2133 ::::::::::TI:A:V:::A::::::::::Y:::M::::::::::::::::::::::::: Hut2600 A:::::::::SI::::::S::::::::::::::::::::::::::::::::::::::::: consensus --GGTYDCPFTEEDVRRVTQVSETHGYREPF--EAAG--HEVTFYNAGHIPGSAHVLVDD #oth 11.1124...213423.3111123.3.212.11111111111.111...1.......11. hla1443 :::NSPL:::S::H:A:LGE:E:R:T:A:::VV::G:TAY:::LF::::::::::::::: Hmu0277 ::::SPR:::::N::::IGE::A::::::::::::::::Y::::::::::::::::::S: HVO_1797 ::::S:N:::::TH:::M::Q:AH:D:G:S:::::::::::::::::::::::::::::: Hbo1699 RR:::::::::::EI::::::::::S:::T:::::::::::::::::::::::::::I:: HQ1121A :::::::::::Q:ELH:::::::::::::T:::DV:D:::SI:::::::::::::::I:: NP0670A ::::S:R:::::TA:K:::::::S:::::S:::::::::::::LFD:::::::::::::: VNG2512 ::::::H:::I:N:IK:::E::R::::GV::::D:::::Y:::::::::V:::::::::: rrnAC2133 :::::VN:::::TN:::::::::::::::S:::::::::Y:::::::::::::::::::: Hut2600 ::::::::::::V:::::::::::::::::::::V:::::::::F::::::::::::::: consensus GDTRLLYTGDFHTDDQRLVSGTTARPDADVVICESTYSDVDHEDRATVEARFVESVRTTL #oth .2...1..1....21....11111..2..1121....1..4.12.652.51111212.12 hla1443 :N:::::::::::::::::::::D:::::::::::::A::T::::RV::D:W::R::::: Hmu0277 :E::::::::::::::::::A:SD::A::A::::::::::S::::GD:::S:::TL:::V HVO_1797 :E::::::A:::::::::::::::::::::::::::::::E::::::::E:::::::::V Hbo1699 :::::F::A:::::::::::AS::::::::I:::::::::E::R:QRI:K::::::::AV HQ1121A :::::F::A::::EN:::::AS::::E:::::::::::::Q:DP:KQI:T:::::::::M NP0670A :E:::::::::::::::::A::S::::::::V:::::A::::DP::D::D::AQ::K::: VNG2512 :::::::::::::T::::::::::::E::::V::::::::T:D::DS:::::A:::K::: rrnAC2133 :::::::::::::::::::A:::::::::A::::::::::::DP:E:::G::::::E::: Hut2600 :E::::::::::::N::::A:::::::::::LT:::::::S::::::L:E::A:::K::: consensus WEGGTVVVPAFAIGRTQELLLVCEAHDIDCYVDGMGKRVTEMLRRHPEFVRDADALRRAK #oth .1....12..........211122.12121......22.1221351.412.142.132.2 hla1443 :::::::A:::::::::::M::A::N:LTP::::::VE::RLV::::::L::PE:::::T Hmu0277 :Q::::::::::::::::IM:::A::G:::::::::Q::::Q::H::A:L:::::F:G:V HVO_1797 ::::::::::::::::::::M:LD::::::::::::V::L:::GN::DY::::A::K::: Hbo1699 :::::::I::::::::::M::::A:N:::::::::::Q::K:::::::::::E::::::: HQ1121A :Q::::I::::::::::::::::A:NN::::::::::Q::K::KE::Q:I:GEE::GH:: NP0670A ::::::::::::::::::M:::::::::P::::::::Q::::::GY:G::::DE:F:::: VNG2512 :::::::::::::::::::::::D::::P::::::::::::::L:Y:G::::G::::::: rrnAC2133 ::::::::::::::::::M:::::::::P::::::::Q:::::GQY::::::::::Q::: Hut2600 :::::::I::::::::::M:MI::::::P:::::::::::K:::::::::::P:::Q::: consensus SNARFVTGRDGQRKRIADQNAAIVTTSGMLSGGPAMTYIPEIRSNPTNKIALTGYQVEGT #oth 12..1.2.1....1..15222211......1...111.2.1.133.2.2121.....1.. hla1443 GA:::::::::::::::GD::L:I::::::A:::VHS:L:::::::::TVT::::::::: Hmu0277 ::::::D::::::R:::::::VV:::::::::::::::V:A:ADR:V:T::M:::::::: HVO_1797 ::::V:S::::::::::RE:SV:::::::::::::::::::::DD:::::C::::::::: Hbo1699 :::::::::::::R:::K::TV::::::::::::::::V:::::::::::T::::::::: HQ1121A :::::::::::::::::E::TV::::::::::::::::::::::::::::T::::::::: NP0670A :H:::::::::::::::EE::::::::::::::::::::::::AH:::MV:::::::::: VNG2512 :H:::::::::::::::::Q::::::::::::::::::::::::::V::::M:::::A:: rrnAC2133 :H::::::K:::::::T::K:::::::::::::::::::::::G::M:::TM:::::::: Hut2600 :H::::D::::::::::A::T::::::::::::::::::::::DR:V::::::::::::: consensus PGRDLLETGRAEIDGRVMPVSAQVEQYDFSAHADRDGLLAFLDAYR--DTRVLVNHGDRC #oth ...3.312.121112323.11.12.41.......24..622.34.1112243111...1. hla1443 :::E:Q:R::LA:N:T:R::::R::SF::::::::G::E:::ES::::GS:::::::::: Hmu0277 :::::::::S:::::::::::::::A:::::::::E:::S:::::::::S:L:I:::::: HVO_1797 :::E:V:R::C:LN:G:V::A:RA:M:::::::::H:::S:::D:::::AP:F::::::: Hbo1699 :::::::R::::::E::::::::::W:::::::::::::EL:S:::::EAPI:::::::: HQ1121A :::S:::::::::ND:I::I:::::W::::::::K:::MEL:NE:K:::::::I:::::: NP0670A :::R:V:::::::::::::::::I:::::::::::E::VS:::P::GG::EA::V::::: VNG2512 :::S:IDS:::::::::L::::::::::::::::HA::R::::D:::::AT:::::::D: rrnAC2133 :::::::::S::::::I:::::R:::::::::::::::F:Y::S::::::P::::::::: Hut2600 :::::::::S:::::QR:::A::::S:::::::::A::D:::::::::E:QL:::::::: consensus EAFAAELRDDGFDASAPELGETVEV- #oth 25..43.333133.3..231332624 hla1443 :::::D::G::::::::::::R::L: Hmu0277 :S::R::::::H:::::T:::::RLS HVO_1797 A:::G::SA::YE:A:::I:A::::: Hbo1699 :L::D::N:::::::::::::K:T:N HQ1121A QR::D::NASE:::T::T::QEISI: NP0670A AD:::T:SER:LP:::::V::::HI: VNG2512 A:::DA:::A::T:R:::RDD:CP:: rrnAC2133 ::::TT::E::Y::T:::::A::AIQ Hut2600 :Q:::::AG:::::T::SI::::::R