|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2366 | VNG2239 | Hut2906 | rrnAC2500 | Hmu2800 | NP2254A | hla0442 | HVO_0144 | HQ3403A | Hbo1274 |
1692 | VNG2239 | 2356 | 1400 | 1396 | 1484 | 1526 | 1478 | 1444 | 1469 | 1494 |
1742 | Hut2906 | 1400 | 2344 | 1565 | 1745 | 1488 | 1469 | 1476 | 1445 | 1527 |
1709 | rrnAC2500 | 1396 | 1565 | 2361 | 1773 | 1439 | 1480 | 1455 | 1405 | 1470 |
1859 | Hmu2800 | 1484 | 1745 | 1773 | 2364 | 1547 | 1613 | 1526 | 1503 | 1605 |
1835 | NP2254A | 1526 | 1488 | 1439 | 1547 | 2338 | 1561 | 1498 | 1595 | 1638 |
1844 | hla0442 | 1478 | 1469 | 1480 | 1613 | 1561 | 2402 | 1602 | 1539 | 1692 |
1862 | HVO_0144 | 1444 | 1476 | 1455 | 1526 | 1498 | 1602 | 2420 | 1662 | 1756 |
1839 | HQ3403A | 1469 | 1445 | 1405 | 1503 | 1595 | 1539 | 1662 | 2440 | 1802 |
1954 | Hbo1274 | 1494 | 1527 | 1470 | 1605 | 1638 | 1692 | 1756 | 1802 | 2408 |
323 symbols consensus M-MRVTFLGTSGAVPTTERNPSAFFVNRDGDRLLFDCGEGTQRQMMRFGTGFAVSHLFVT #oth 12111.....1......3.21.13212.2.132...1..1...1..111...42223.11 VNG2239 :TLE::::::::::::::::::SV::R:N::AF:::A::A:::::::YK:::G::DV:I: Hut2906 -::::::::::::::::::::::VM:R:E:E:::::::::::::::H:::::D:A:I::S rrnAC2500 :T:::::::::::::::Q::T:SI:::::::Y:::::::::::::::Y:::::ID::::: Hmu2800 -::::::::::::::::::::::L:::::::K::::::::::::::::::::::D:V::: NP2254A :SL::::::::::::::R::T::V:LR:E:::M::::::::::::::::::::::KA:I: hla0442 :SL:::::::G::::::::A:::L::::E::::::::::::::G::::::::GID::::S HVO_0144 -:::A:::::G::::::A:A::::L:::::E::::::::::::::::Y::::G::::::: HQ3403A -:::A:::::G::::::::G::::::E:::E:::::::::::::::::::::SL::I::: Hbo1274 :S::::::::G::::::::G::::L:::::E:::::::::::::::::::::T::::::: consensus HLHGDHVLGIPGLLQTLDFNDREEPLAIHAPPGTRGHLEDLVHAAGYRPSFPVRITEVSP #oth .3....11.1...21.31..1.32212114.4.3355144.1734144121223143352 VNG2239 :G:::::F:L:::VH:W:::::TD::T::V:R:L::DI::::FS::GDVGY::::::AT: Hut2906 :M::::::::::::::M:::E::::::::::H:::SQ::A:IG:T:D:::Y:L:::QNG: rrnAC2500 ::::::::::::::::W:::E::RAI:::T:A::::NIKQ:IQ:N:TT:::::::N:::A Hmu2800 :T::::::::::::::F::::::::::::::A::::TI::::SVT:DT::::::::Q::A NP2254A ::::::I::L::::::M:::::::::SVYV:S:KQAE:R::IDT:AGA:::::HVNG::D hla0442 :::::::::::::V:::G::::A:::T::C::::EDD:H:::::V:HD:A:QI::ES:A: HVO_0144 ::::::I::::::I::::::::DDS::::G:::SK::::Q::::G::Q:G:H:SVH::R: HQ3403A ::::::I::::::I::::::::TDA::::G:::SKP::RH::ET:::::GY:IN:R:IR: Hbo1274 :::::::::::::I::W::::::::I:::::::SKR::QS::N:G::::::::N:H::K: consensus GDVVLDADDYEVRAFETAHR-TASVGYALVEDDRKGRFDREKAE-ELGVPVGPKFGRLHA #oth .51132433.111212.5.2234.4.1113.21.2.1.1.32..221.111..2123..3 VNG2239 :A::RSH::::::::::::S::::::::::::::T:::::AR:::::::::::::ST::D Hut2906 :::::::NE:::Q:I::E::::Q:L::::::::::::::::T::N:::IEP:::YSK::: rrnAC2500 ::::::RSE::I::I::::::C:::::V:D::::::K:::::::E:F:I:P:::YSK::R Hmu2800 ::T:::G:G:::::IR:Q:::CQ:::::V:::::::::::::::E:::IEP:::YSK::R NP2254A :Q::V::::::I:::::D:D:AR:L::::I:AS::::::::R:::::::::::::QQ::: hla0442 :E:A::::G::::::::V::::K:Q::V:E::::P:::::P::::::::::::::::::E HVO_0144 :N:AYR:::::::::D:E::::::::::::::::P::::::::::::::::::A:::::: HQ3403A :S:AV:TEE:II:S:::S::GVT:I::::I:S::::::N:DR:::S:::::::::::::D Hbo1274 :N:A:SG:S::::T:::D::NVR:M:F:::::::P:::N::::::A:::::::D:::::E consensus GEAVELEDGTVVQPEQVVGDPRPGRRVVYTGDTRPTDSTVEAAEDADLLVHDATFADDRA #oth .13.1231.3214112...13....22...1..1.42512512321...1..1..24153 VNG2239 :QP:::D:::::S::::::::::::TL::::::::H:PV:S::::::::I::::::N:AS Hut2906 :::::-H::RTI:::E:::P:::::T:::::::::VEAVRR:S::::::I::G::G:::: rrnAC2500 :::::-HE:ETI:::A:::PA:::::F::::::L::E:VI::S:::::::::::::E::K Hmu2800 ::P::-HE:RTI:::A:::PD::::TL:::::::::::V:::S:::::::::::::::W: NP2254A ::::::::::::E::::::::::::::::::::::::R::TV::N::::I::::::T:N: hla0442 ::P::A:::SI:E:D::::P:::::KF:::A::::REG::AV::::::::::::::::ME HVO_0144 ::D:::::::::RS:::::::::::T:::::::::LN::::V:C:::::::::::T:EE: HQ3403A ::S:K:A::SI:H:::::::S:::::::::::::::ET:::::NN:::::::::::A::: Hbo1274 ::S::::::::IH:::::::::::::L::::::::V:A::DVVDEP:::I::::::E::: consensus ERARRTAHSTAREAADVARRAGARRLALTHISSRYAGDASPIEREAREAFDGE-AFVPDD #oth 3..36.1.1.13..142.63.11231..1.1.2..1133221443.4321112122114. VNG2239 :::AE:G::::G::::::TE:::KA:::::V:::::::::E:SAG:-SG::::::::AH: Hut2906 A:::::G:::::::GSL:AE:::K::::::::T::::RSDQLLE::::::GEA::::AA: rrnAC2500 :::KA::::::::::::::Q:::ST:::::::T:::AS:DELVD:::D::::::VVLAE: Hmu2800 ::::K:::A:G::::E::QE:::K::::::::T::G:NPT::LSD:::::::::V::::: NP2254A D::A:::::::A::::I:S::D::::::V:::::::::P:::::::DD::G:::::::E: hla0442 D:::D:::::G:::GS::E::::K::::V:::::::A:::::R:::::::::::CLL::: HVO_0144 :::KQ::::::::::R:::D:DV::F::::::A:::A:P::LLEQ:::VY:::::::AE: HQ3403A S::KQ:G::::Q:::QI:T::D::Q:::::V:::::::VT:L:SD:TA::::QR:::::: Hbo1274 :::HG:G:::G::::EI:N:::::::::::::::::::::::::::QA::::::::::Q: consensus G--QTIDIPFPDAD--------- #oth .1144312121.33322222221 VNG2239 :::L:HE:::::::::::::::: Hut2906 ::::S::V:Y::DG::::::::: rrnAC2500 :MERRVEF:DA:EY::::::::: Hmu2800 :::RR::V::::E-::::::::: NP2254A :::D:V::::::E-::::::::: hla0442 :::DL:EV::::::E:::::::: HVO_0144 ::::KLEV:YA:S:GGGAETGE: HQ3403A :::Y:L::::::::DNHLSDNIP Hbo1274 ::::K:::Q:::::E::::::::