|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1486 | VNG1646 | HQ3166A | Hut1985 | NP3344A | rrnAC1517 | Hmu2096 | hla1309 | HVO_2453 | Hbo2343 |
1070 | VNG1646 | 1538 | 923 | 1000 | 979 | 946 | 1006 | 982 | 991 | 967 |
1122 | HQ3166A | 923 | 1933 | 1057 | 990 | 1012 | 1054 | 986 | 1092 | 1132 |
1228 | Hut1985 | 1000 | 1057 | 1576 | 1077 | 1227 | 1212 | 1108 | 1078 | 1076 |
1252 | NP3344A | 979 | 990 | 1077 | 1513 | 1147 | 1182 | 1116 | 1181 | 1128 |
1240 | rrnAC1517 | 946 | 1012 | 1227 | 1147 | 1578 | 1256 | 1116 | 1097 | 1091 |
1269 | Hmu2096 | 1006 | 1054 | 1212 | 1182 | 1256 | 1584 | 1144 | 1120 | 1096 |
1243 | hla1309 | 982 | 986 | 1108 | 1116 | 1116 | 1144 | 1507 | 1165 | 1162 |
1276 | HVO_2453 | 991 | 1092 | 1078 | 1181 | 1097 | 1120 | 1165 | 1577 | 1231 |
1254 | Hbo2343 | 967 | 1132 | 1076 | 1128 | 1091 | 1096 | 1162 | 1231 | 1583 |
266 symbols consensus ---------------DLRVVVVDNFDSFTYNLVEYLSEQ----E-ADTEVRKNTASLDEI #oth 1222233333323324451111..1..........4.323443344323.31...1.431 VNG1646 :::::::::::::::-MN::::::Y::::::::::::A:PRDDHAP:VT:L::::::AAV HQ3166A ::::::::::::::MT:S:L:I:::::::::::::::::RINN:PL:VH::::::::KQ: Hut1985 MSESTSANATETPTD::E:LF::::::::::::::T::Y::::-::N:T:V::::::SDV NP3344A :::::::::::::::MT:::FI:::::::::::::V:QH::::DGTE:A::R:::::S:: rrnAC1517 :MSTAQPAGADAVRD::::LF::::::::::::::V::H::::-::E:::VR::::::DV Hmu2096 :::::MSGDEAAGDDRPL:LFI:::::::::::::V::H::::-::::::LR:::T:A:V hla1309 :::::::::::::::-MK:::::::::::::::::I:D:PLDG:EIAV::F::::::V:: HVO_2453 :::::::::::::::MI:L::::::::::::::::F:::TVEG:PL:I:::::::::::: Hbo2343 ::::::::::::::MT:::::::::::::::::::::::RIGDDEIAV:::::::::::: consensus RAADPDAIVISPGPGHPKNDRDVGVTMDVLRELSPEVPTLGVCLGLEAAVYAYGGTVGRA #oth 124....121.......213.....132.1232.341........1.1..121..2111. VNG1646 :::::::V:::::::::DTP::::::T::::AV::R:::::::::M::::HE:::::::: HQ3166A ETI::::::::::::::::A::::::N:::TTI:QT:::::::::::::::::::N:::: Hut1985 :::::::::::::::::R:::::::ST:::::I::D:::::::::::::::E::::::H: NP3344A E:L::::::::::::::::::::::::::VS:::T:::::::::::::::::H:::IS:: rrnAC1517 E:F:::::IL:::::::::E::::::L:::::V::D:::::::::::S::::::::I::: Hmu2096 ::V:::::::::::::::::::::::::::::V::::::::::::::::::E:::::::: hla1309 :D::::::L::::::::::E:::::::P:::D::::I::::::::::::::E::::::H: HVO_2453 :DL:::::::::::::::::::::::N:::T:::T:I:::::::::::::::::::I:H: Hbo2343 :DL:::::::::::::::::::::::TE::TT::KSI::::::::::::::V:::S::H: consensus PEPIHGKAFPVDHDGEGVFAGLDQGFQAGRYHSLVATDVPDCFEVTATT----------- #oth 11.2...23213..26.11211223.311.....21321122.411.1.21111111111 VNG1646 A::M:::TT::S::ET:I::DIQ:D:P:A::::::C:SI:S::A:::::::::::::::: HQ3166A :A:V:::SSTIA:::Y:I:D:::KT:E:::::::I:::::E:::IS:A:RVSGTLSATDD Hut1985 ::::::::ASIS:::K:::::::::::G::::::::G::::::::::::::::::::::: NP3344A ::::::::::::::::::Y:::E:::R:::::::::ES:::::A:::::::::::::::: rrnAC1517 ::::::::::I::::K::::::E::::G::::::I:D:::EE:V:S:::::::::::::: Hmu2096 ::::::::::I::::Q::::::::::::::::::I:DE:::::D:::::GV::::::::: hla1309 :::::::::::::::::::V::::::R:::::::A::E:S:D:S:::::::::::::::: HVO_2453 :::::::::::::::A::::::ED::P::::::::::::::::D:S:::::::::::::: Hbo2343 :::::::::::E::SH::::::E:Q::::::::::::E::E::::S:::::::::::::: consensus -----------------DHDGE-ELVMGVRHREHPIEAVQFHPESVLTGVGHDVIRNFLD #oth 11111111111111113332232312.11...21.111..........11..1214...5 VNG1646 :::::::::::::::::-R::-:S:P:AI:::D::LAC:::::::::::::::::G:::: HQ3166A SPQSITTREDPDTDADSND:VDDD:I::I::::Y:::::::::::::::::::L:K:::N Hut1985 ::::::::::::::::ETD:A-:D::::I:::::::::::::::::::A::::::::::V NP3344A :::::::::::::::::::E::::::::::::A::L:C:::::::::::::::I:A:::: rrnAC1517 ::::::::::::::::ETE::T::::::::::::::::::::::::::A::::::::::A Hmu2096 ::::::::::::::::ATD::TV::::::::::Y::::::::::::::A::::L:E:::: hla1309 :::::::::::::::::::E::::I:::I:::D:::::::::::::::A::::L:::::A HVO_2453 :::::::::::::::::::::::A::::::::DY:::C:::::::::::S::G:V::::T Hbo2343 :::::::::::::::::::F:D:::::::::::Y::::::::::::::::::::V::::Q consensus AV------------------------ #oth 43345233222111111111111111 VNG1646 :AAAH::::::::::::::::::::: HQ3166A RCGRVDDDNCDNSSDAQKKPTTTPSD Hut1985 S::::::::::::::::::::::::: NP3344A T:RGQ::::::::::::::::::::: rrnAC1517 GL:::::::::::::::::::::::: Hmu2096 GL:::::::::::::::::::::::: hla1309 S::::::::::::::::::::::::: HVO_2453 ::AGFDVA:::::::::::::::::: Hbo2343 ::GNERAVASP:::::::::::::::