|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1943 | Hmu1913 | rrnAC1406 | Hut0931 | VNG1118 | HQ1603A | NP1884A | hla2430 | HVO_0916 | Hbo0624 |
1400 | Hmu1913 | 1928 | 1303 | 1307 | 1234 | 1174 | 1259 | 1299 | 1243 | 1270 |
1422 | rrnAC1406 | 1303 | 1942 | 1311 | 1303 | 1150 | 1255 | 1265 | 1269 | 1269 |
1543 | Hut0931 | 1307 | 1311 | 1956 | 1364 | 1230 | 1356 | 1353 | 1401 | 1355 |
1521 | VNG1118 | 1234 | 1303 | 1364 | 2116 | 1327 | 1350 | 1411 | 1387 | 1381 |
1431 | HQ1603A | 1174 | 1150 | 1230 | 1327 | 1920 | 1273 | 1331 | 1313 | 1420 |
1567 | NP1884A | 1259 | 1255 | 1356 | 1350 | 1273 | 1989 | 1504 | 1438 | 1380 |
1666 | hla2430 | 1299 | 1265 | 1353 | 1411 | 1331 | 1504 | 1977 | 1476 | 1508 |
1651 | HVO_0916 | 1243 | 1269 | 1401 | 1387 | 1313 | 1438 | 1476 | 2041 | 1606 |
1656 | Hbo0624 | 1270 | 1269 | 1355 | 1381 | 1420 | 1380 | 1508 | 1606 | 1936 |
293 symbols consensus ----------------------MLTFVGLGLYDERSITVAGREALRDADRVFAEFYTSRL #oth 1111111111111111111111....1.......1.1221.11.123.1222......4. Hmu1913 :::::::::::::::::::::::::::::::::::::::E:K:::QT:TDIY::::::K: rrnAC1406 ::::::::::::::::::::::::::::::::::::V:::::D:I::::::::::::::: Hut0931 ::::::::::::::::::::::::::::::::::::V:L:::D:I:T:::::::::::Q: VNG1118 MLTGVVLAATRNPYDAARPTRG::::::::::::A:V:::::D:IAA::::::::::::: HQ1603A ::::::::::::::::::::::::::I::::::::::SI:::D::QA::Y:A::::::Y: NP1884A ::::::::::::::::::::::::::::::::::::::::::::::S:::::::::::K: hla2430 ::::::::::::::::::::::::::I::::::::::::E::::::S::::::::::::: HVO_0916 ::::::::::::::::::::::::::I:::::::::VP:E:::::A::::A:::::::H: Hbo0624 ::::::::::::::::::::::::::I::::::::::::E:::::A::::A:::::::H: consensus VGATVEDLEAYHDIDIEVRDRAGVEQDPEPILDAAEDEHVVFLTAGDTMISTTHVDLRLR #oth 21121441154111312211.111..3.231.31.332321.2......1....2...1. Hmu1913 I:T:IQK::Y:::::::LL:::A:::T:DEL:A::::GD:A:V::::::V:::::::::: rrnAC1406 I:TDI:T::DTLETS::R:::::I::::::::E:::S:::::C::::::V::::A::::: Hut0931 A::SI:EI::F::T:::::::::I::::D::::::LEDE::::::::::::::::::::: VNG1118 I:TD:AA:::H::TT::R::::::::H::::::::A:GDA::::::::::::::::::M: HQ1603A :D:::S:::TA:::::D::::E::::H::D::RK:QS:D:A:::::::::::::T::::: NP1884A A:::::E:QNH:::::::::::::::E:G:::::::AGGA:::::::::::::::::::: hla2430 :::D:D:::::::TE::::A:E:::::::A::A::::G:TA:::::::::::::T::::: HVO_0916 ::::::E:::::::::::::::::::::G::::::::::::::::::::::::::::::: Hbo0624 :::::::::S:::::VA:::::::::H::D:::::::::::::::::::::::::::::: consensus AEDRGIDTRVIHGTTAQSAASSLTGLQNYRFGKATTLPFPYAHGGDGVPDSVIDTIEANR #oth .43...2.121.12..22..21.1.........11....132..112..3..321121.. Hmu1913 ::E:::H::::::::::T:::::::::::::::::::::ED:::::::::::VE::T::: rrnAC1406 :A::::E::IV::::::T::G::::::::::::::::::ED:::::::::::VA:::D:: Hut0931 ::Q:::E:Q::::::::A:::::::::::::::::::::ERS:::::::::::E:::::: VNG1118 :A::::::::::AP::A:::AG::::::::::::::::::W:::A::::G::T::::::: HQ1603A :I:::::::::::V:::T:::G:::::::::::SV:::::::::AE:::T::T:S:A::: NP1884A :DN:::E:QI::::::GA::A::S:::::::::::::::::::::E:::G::L:::AD:: hla2430 ::E::::::::::V::::::::::::::::::::::::::::::::D::G:::::::::: HVO_0916 ::::::E::L:::V:::::::G::::::::::::V::::::V::::P::K::V:SL:::: Hbo0624 :VE::::::::::V:::::::G::::::::::::V:::::::::A::::K::::S::::: consensus ERGLHTLVYLDIKVD-----GP-ADRDEYMTADQAAELLADHWE-DALGVVVARAGSPDP #oth 211...1.1...1131213323343433112114..41113424213111111...1211 Hmu1913 ::::::::::::::::::DPHW:EGEQ:F::::H::G:::::F-::T::::::::::AN: rrnAC1406 D:D:::::::::::::::DPHWEESD:T::::S:::TM:SEPFP::T::::::::::::: Hut0931 D:::::::F:::T:E:::::--:S:DGT::RG::::S:::K::RPN:::::::::::::: VNG1118 ::::::::::::::::::::H:RV:G:A::::S:::D:::TN:DA:::::::::::A::A HQ1603A ::::::V::::::--:::::--::N::::LR:SD:::M::TDL:::M:AIA::::::::: NP1884A K:::::::::::::G:TGPR::DP:HE::::::Y::::::EDL-::TV::AI:::::::: hla2430 ::::::V:::::::G:TGPT::DP:HE::::::V::G::::G::::::A::::::::::A HVO_0916 DL:::::::::::::WEGRR:VEV:G:Q:::::Y::::F:E::DA:::::A:C::::::: Hbo0624 :::::::::::::--:::::--::::::::SG:Y:::M:::G::::V::I:::::::E:: consensus VVAADRLSALADRDFGDPLHLLVIPGDLHHVEADALAALAGAPAEAL-E---- #oth 213.12.21..2531.3...1.12.121.43.311.54211.13353534522 Hmu1913 ::E::S:D::::G:Y:G::::::V:A:::EM:R:::TT::D::LAD-:-:::: rrnAC1406 L::::T:DE::TQT::::::::::::S::PL:::T:ESV:::AL:--:-:::: Hut0931 ::Q:G::::::EM:::G::::::V::S::YI:R:::::IGD:::D::D:NIVD VNG1118 T:R::::G::::A:::S::::::V::S:::I:R:::RE::::::D:::-:::: HQ1603A T:R::::::::EK::::::::::L::E:::L:EE::::::D:::DM:NAVDSQ NP1884A :L:::::::::::S::::::::IV:::::V::H:::V::::::ES::PDPV:: hla2430 :::::::::::::E::::::::::::::::::::::VG:::::::LVE::::: HVO_0916 :::::::::::E::::A:::M:::::EV::::::::S::G:::E:LFDDEN:: Hbo0624 L:::::::E::E::::::::M::::::V::::::::RT:G:::D:V:S:NEV: