Home |  Text search
[S] (-) COG1849 Uncharacterized protein conserved in archaea
9 genomes BUD0383 9 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG1260

rrnAC1128

HVO_1124

Hbo0435

Hmu1449

Hut1245

hla2754

NP4324A

HQ1653A

Pairwise sequence scores
Consensus score722 HQ1653A VNG1260 NP4324A Hut1245 rrnAC1128 Hmu1449 HVO_1124 Hbo0435 hla2754
493HQ1653A 710 452 450 469 445 454 446 482 479
595VNG1260 452 718 519 548 521 561 457 461 519
603NP4324A 450 519 722 579 557 562 428 480 502
618Hut1245 469 548 579 722 594 547 462 500 496
596rrnAC1128 445 521 557 594 722 621 484 446 448
633Hmu1449 454 561 562 547 621 731 474 484 473
520HVO_1124 446 457 428 462 484 474 735 483 501
526Hbo0435 482 461 480 500 446 484 483 733 520
545hla2754 479 519 502 496 448 473 501 520 930

122 symbols
consensus       ---------------------------MAADLAEKTDRYERLLADALAAAEIAPPEGTPL
#oth            111111111111111111111111111.3.1141..11.111.21.122.4321143111
HQ1653A         ::::::::::::::::::::::::::::T:E:IA:::Q:::M:::::EV::::V:KT:::
VNG1260         ::::::::::::::::::::::::::::::::::::::::G:::::::::DPV::A:S::
NP4324A         ::::::::::::::::::::::::::::S:::E:::::::::::E:::::::::Q:::::
Hut1245         ::::::::::::::::::::::::::::P::::::::::::::TE::E::TVR:::::::
rrnAC1128       :::::::::::::::::::::::::::::::IE:::::::G:::E::D::SV:::::::M
Hmu1449         ::::::::::::::::::::::::::::::E:W:::::::G:::::V::::::::::::M
HVO_1124        ::::::::::::::::::::::::::::::::Q:::N:::GM:::::DE:VQ:V:DE:H:
Hbo0435         ::::::::::::::::::::::::::::P:E::::::::G:M:E::::::T::V:PE:::
hla2754         MPVGFGSGGIGVALRRRLFERLPGTGR:T:::E::::::::M::::::V::PR::AD:::

consensus       GEAAAECEEMAESYLEDGRHFRADDDPVNALASFSYGHGWLDAGARIGLFDVPTDGHLFT
#oth            24..3154...51..1..1..1331.2.....11...11.1...1.2.1.31.3222...
HQ1653A         :R::H:TR:::R::::::::::TV::L:::::A::::Y::::::V:::::NI:AESD:::
VNG1260         ::::::YF:::::::::::::::H::::::::A:::::A::::::::::::::AA:E:::
NP4324A         Y:::V:FR:::Q::::::::::DN::::::::::::::::M:::::V:I:E:::::::::
Hut1245         ::::::F::::Q::::::::::D:::L:::::A:::::A:::::::V:::::::::::::
rrnAC1128       HN::L::::::SA:::::::::D:::L:::::::::::A:::::::::::::::E:::::
Hmu1449         HD::V::A:::A::::::::::::::::::::::::::A:::::::::::::::E:::::
HVO_1124        :A:::D:L:::::::D:::::K::::W::::::::::Y::::::V:M::::I:D:S::::
Hbo0435         :D::VDI::::I::::::H:::EN:::::::::::::Y::::::V:M::::::E:TD:::
hla2754         :::::DVL::::::::::::::E:G::::::::Y:::Y::::::V:M:::A::D:TE:::

consensus       V-
#oth            32
HQ1653A         TS
VNG1260         ::
NP4324A         Q:
Hut1245         ::
rrnAC1128       ::
Hmu1449         ::
HVO_1124        M:
Hbo0435         ME
hla2754         T: