|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1981 | hla0535 | Hut2641 | NP0722A | VNG2493 | rrnAC2920 | Hmu2753 | HQ3441A | HVO_0091 | Hbo1405 |
1344 | hla0535 | 2292 | 1001 | 1054 | 1127 | 1067 | 1071 | 1056 | 1088 | 1118 |
1318 | Hut2641 | 1001 | 1999 | 1037 | 1092 | 1138 | 1171 | 883 | 1069 | 950 |
1353 | NP0722A | 1054 | 1037 | 1929 | 1180 | 1170 | 1154 | 977 | 1053 | 1021 |
1484 | VNG2493 | 1127 | 1092 | 1180 | 2081 | 1239 | 1255 | 965 | 1048 | 1077 |
1408 | rrnAC2920 | 1067 | 1138 | 1170 | 1239 | 2001 | 1370 | 962 | 1047 | 997 |
1454 | Hmu2753 | 1071 | 1171 | 1154 | 1255 | 1370 | 2002 | 995 | 1052 | 999 |
1189 | HQ3441A | 1056 | 883 | 977 | 965 | 962 | 995 | 2041 | 1101 | 1229 |
1345 | HVO_0091 | 1088 | 1069 | 1053 | 1048 | 1047 | 1052 | 1101 | 2017 | 1239 |
1302 | Hbo1405 | 1118 | 950 | 1021 | 1077 | 997 | 999 | 1229 | 1239 | 2196 |
311 symbols consensus --------------------------------------MPVADLHVHTTASDGTLTIDEV #oth 11111111111122222222222222122322333232432....3..13...4124212 hla0535 MYNLSPENHIIFPYIPLSRAIDRRRLVRGHRTAGMDTDRI:::::A:::V::::M:A::L Hut2641 :::::::::::::::::::::::::::::::::::::::I:::::::::R:::::PP:A: NP0722A :::::::::::::::::::::::::::::::::::::::V::::::::QN:::S::LGAI VNG2493 :::::::::::::::::::::::::::::::::::::::VH::::::::N::::::::A: rrnAC2920 :::::::::::::::::::::::::::::::::::::::V:::::::::R:::::SF::: Hmu2753 :::::::::::::::::::::::::::::::::::::::T::::::::QR:::::SL::: HQ3441A :::::::::::::::::::::::::::::MTTNSAETDA:S::::I:::::::L:::::L HVO_0091 ::::::::::::::::::::::::::::::::::MDESP::::::L:::::::R::::AL Hbo1405 ::::::::::::MTENAFTDDRPLTAVIRDRNGDFDGDE::::::L:::::::V:::A:: consensus PDAARAAGLDAVAVTDHDRLHPDLDAPVTERDGVTVIRGIELRVEAGDQRLDLLGYGVRP #oth 221.3421243..1.....33.3232.13322221322.1....3135211.....1145 hla0535 V:V::ET:::W::I:::::V::::S:::V:::DLR:V:::::::D::FE:::::::A:GH Hut2641 S::::::D:R::::::::::-:PF::::V::::::::A:V::::T::::Q::::::::D: NP0722A :E::K::::ST:::::::::::EMRT::A:L::I::VH::::::::D:::V::::::::R VNG2493 ::::HD::VT:::I::::::::A::::::V::DI:::H::::::DT:P::V:::::::HG rrnAC2920 :A:::R::VEV:::::::::Q:A::G:A:Q:::::LLH:::::::TET::::::::::D: Hmu2753 :A:::RG:::::::::::::S::::::::T:E:I::VH:::::::::Q::::::::::S: HQ3441A :EV:HK::I:T::::::::I::E:AT::STKGA::I::::::::S:::::::::::A::R HVO_0091 ::::::G:V:V::::::::Y::E:::::V:::::::V:::::::D:::R:V::::::L:E Hbo1405 ::::V:G:VEV::::::::V:::::::::::::::M:::V:::::TPE::::::::A::D consensus TDALRAECERIQRDRKERGAAIVDAVEARLGVSLPIEPRPGLGRPHIARAIAE-SDADYD #oth 12215233311.21.53.11311231.431223.321315.2...21.211441243212 hla0535 :E::D::I::L:T::EQ::::::::::D::::D:GV:::S:::::::::::D:::S:P:: Hut2641 :P:::::T::L::::I::ARE:::C::G:::ID:GLDVH::V::::::Q:V:D::HGH:T NP0722A :E::S:LVD:L:T:::::::::I:R:::E::TE::V:::A::::::::A::EQ:-VS::S VNG2493 ::::T:::D::::::RD::RR:I:R::::::::::L:::::::::::::::TAHP:T::: rrnAC2920 ::E::T::A::::N:R::::R:IEC::D:::::::V:::D:::::::::G::::-VS:HT Hmu2753 ::::V::::::::N:A::::::::C::E::S:::::::::::::::::::::::-VS::: HQ3441A ::S:IELTTS::QN::K::::M:::::SY:DI::D:DI:K:::::D:::::H:::::P:: HVO_0091 RP::VETV::L::N:V::ARE::A:I:EET::R:E:DIHD:V::::V::::DA::E:P:: Hbo1405 :P:I:EVT::::T::::::RK::EN::SH:D:E:D::L:E:I:::N:::::EG::::P:: consensus YQDA-FDELIGNDGPCYVARDVPDFERGVALLRDACGLVGLAHPFRYDDPAAALALCADL #oth 363.1.331..424..113.2213212.342.42113111....2..3.243..44145. hla0535 :AG:::::::::::::::::E:TKL::::E::::::A::::::::::::VG:::DVARE: Hut2641 V::::::Q:::T:Q:::::::L:TV:::RE::D::AA:::::::L:::::D::::HAGS: NP0722A :GA:::E::::DGR::::::::::::T::SV:DA:::V:S::::H::A:TE:::S::::: VNG2493 TM::V::S::::::::F:::::::::T::D::T:::::::::::L:::::QH::::::A: rrnAC2920 F:S::::::::D:C::::P:E::S::::C:V:S::::::::::::::P:T::::SK::S: Hmu2753 VDG:::AH:::D:C::::S:E::S::::RE::A:::::::::::L:::::ES:::::DT: HQ3441A :S::::S:V::SEN:::IQ::I:S:DT:AGV:A:::SVI::::::::P::::::KRAEK: HVO_0091 ::G::::::::A::::::::EL:T:DD:::A:::::DV:::::::::R:::G::E::::: Hbo1405 :E::::AH::::::::::Q:Y:::::T:::A::ES:AV:::::::::P::E:::ERA:E: consensus DAVERHYPY----GRAVDD--ALVERAIERHDLLLTGGSDAHDETLGIAGLDRAAFARFR #oth ..1.25...32333433161163122223441.231..1...3311.61.1355333313 hla0535 :::::F::::::::::::::::::::VAAES:::::::T:::ER:::E:::TAE:::PV: Hut2641 ::I::E:::::::E::::R::TPIDD:::A::::A:::::::G::::::::G::TSE::C NP0722A :::::::::::::D::::H::RP:::::::Y:::V:::T:::G::::V::::GRDYRT:: VNG2493 ::::A::::DRPV:T:P::GA:::AD::DT:::IP:::T::::H:::T:::::D:Y:AV: rrnAC2920 :::::W:::::::::::::::S::DD::::Y::VP:::::::G::::DT:::SP:WD:VE Hmu2753 ::::GP:::::::ADDP:L::SA:D:::::::::V::::::::DR::L::::S:QWE:V: HQ3441A :::::Y:::SGQNADRA:P::VVI:DVATNA::::I::::::NR:V::T:PPP:D:EP:A HVO_0091 :::::Y::::::::FD:EA::D:::E:V::YG::A::::::::::::R::PPETD::::A Hbo1405 :::::F:::GGGSAAKE:V::E::::IAAAN::::::::::::R:::V::PTED:::A:A consensus TALDG------ #oth 31154533221 hla0535 ER:PNPIAESP Hut2641 ::::AALSTV: NP0722A :::--:::::: VNG2493 :R:A::::::: rrnAC2920 :::NV:::::: Hmu2753 D:::VSPE::: HQ3441A :RVS-:::::: HVO_0091 A:V::L::::: Hbo1405 ARVP:V:::::