|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2760 | rrnAC0246 | Hmu1089 | NP3770A | HQ2465A | hla1870 | VNG1344 | Hut0303 | HVO_2908 | Hbo2688 |
1418 | rrnAC0246 | 2883 | 1212 | 1215 | 1236 | 1238 | 1163 | 1089 | 1198 | 1175 |
1954 | Hmu1089 | 1212 | 2938 | 1690 | 1765 | 1754 | 1674 | 1615 | 1774 | 1750 |
1965 | NP3770A | 1215 | 1690 | 2849 | 1749 | 1823 | 1724 | 1540 | 1802 | 1781 |
2055 | HQ2465A | 1236 | 1765 | 1749 | 2941 | 1857 | 1771 | 1556 | 1863 | 1852 |
2288 | hla1870 | 1238 | 1754 | 1823 | 1857 | 3000 | 1891 | 1579 | 2042 | 2037 |
2106 | VNG1344 | 1163 | 1674 | 1724 | 1771 | 1891 | 2842 | 1588 | 1896 | 1852 |
1714 | Hut0303 | 1089 | 1615 | 1540 | 1556 | 1579 | 1588 | 2431 | 1558 | 1604 |
2250 | HVO_2908 | 1198 | 1774 | 1802 | 1863 | 2042 | 1896 | 1558 | 2804 | 2127 |
2225 | Hbo2688 | 1175 | 1750 | 1781 | 1852 | 2037 | 1852 | 1604 | 2127 | 2871 |
464 symbols consensus -----------------------------MRTVDAAGLEIGDDHPPRIMGVLNVSKESPY #oth 11111111111111111111221122222.22.111..41..22.1.1.1...2.51.1. rrnAC0246 :::::::::::::::::::::::::::::::::EID::PV::G::T:V:S:::M:SN:G: Hmu1089 ::::::::::::::::::::::::::::::QN::::::G::::::T:::::::::R:::: NP3770A ::::::::::::::::::::::::::::::::::::::Q::::::::::::::::E:::: HQ2465A :::::::::::::::::::::::::::::::S::::::S:::ES:::::::::I:::::: hla1870 :::::::::::::::::::::::::::::::N:::::::::::::::::::::::A:::: VNG1344 ::::::::::::::::::::MSVPPSSRD:::::::::P::::Y:::::::::::::::: Hut0303 MSMGSDETIRPSAFAGDQPFLAVPVVAPT:HN::::::G::::::::::::::I:Q:::: HVO_2908 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo2688 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus DPSVFDDPDEAAAYVDEELIDEGADIVDVGLESANKRLDVLSAEQELDRLDTAIETLESV #oth 2...131241..4111431121....1.1..1...1221111113.22..2113433332 rrnAC0246 K:::YL::A:::EAIE:N:VPA::::I::::Q:::PKYESKPV:M:K:::EEVAPLVDEL Hmu1089 :::::::H:::::::E:::VG::::::::::::::::F::::::::::::::::Q:M::: NP3770A ::::::E:::::R::::D::G:::::::::::::::KFE::::D:::::::::V:::R:T HQ2465A ::::::E::A::T:::S:::::::::::I::::::::F:::::::::T::E::::AIQ:: hla1870 ::::Y:::G:::E:::::::G:::::::::::::::D::::::::::::::::::::::T VNG1344 ::::Y:::EA::::::S:::G:::::::::::::::D::::::D::RE::Q:::D:I:R: Hut0303 :::::A:::::::::E-DM::A::::::::::::::::::::::E:RE::::::::IDA: HVO_2908 K::::N::S:::E:::R:::::::::::I:::::::::::::::D::::::::LSV:D:: Hbo2688 E::::N:AG:::K:::TA:::::::::::::::::::FE:::::E::::::::V:V:::: consensus SGDAVFSIETRYHEVADEALSRGFDMVNDICGFADPEMPRVCEEHDAAVAKMASPPDLER #oth 211122.1....2...12.143...11..1......2.2411432.21.3........21 rrnAC0246 DA:VPL:L::::A:::E::IGH:::VI::V::::::::KG:V:D::MP:V::::::::AS Hmu1089 ::::I:::::::::::EA:IEA::::::::::::::::::I:R:Y:V::G:::::::::: NP3770A :::::W::::::::::EA::DA::::::::::::::::TT::A:Y:V::S:::::::::: HQ2465A :::::::::::::::::T::::::::::::::::::K::E::S:Y:V::G::::::::T: hla1870 :::::W::::::::::::::A:::::::::::::::::::::R::::::S:::::::::: VNG1344 E:E:::::::::S:::::::AA:::::::::::::::::A:::A::V::::::::::::: Hut0303 D:::::::::::S::::::::::::::::V:::::::::A:::S:::::V:::::::::: HVO_2908 ::::::::::::::::EA::DG::::::::::::::V:::::::F:::::::::::::T: Hbo2688 :::::::::::::::::::::::::::::::::::::::T::TD:::::::::::::::: consensus PGAIEE-----------------VDDIYEALAQNGFTDKTIVDPAFGGWSEAKTLEDDRE #oth ...234111221222211221111.2112..533.1.1...2.......1341131211. rrnAC0246 :::LKT:::::::::::::::::I:::F:::QRD:::::::I:::::::YDG:EF::NW: Hmu1089 :::V::TDWAARKSPSWAQQADY::QV::::G:::L:::::::::::::::::::AN::: NP3770A ::::DD::::::::::::::::::::::A::E:::::E:::L:::::::::T::I::::: HQ2465A :::::N:::::::::::::::::::::::::::::::E:::I:::::::::E:::A:::: hla1870 :::::D:::::::::::::::::::E:::::SM::L:::::L::::::::K:::HA:::: VNG1344 :::::S::::::::::::::::::::::D::SLH::::::::::::::::TE:::A:::: Hut0303 :::VG:TDWTERCDAEWAADADY::QV::::K:G:::E:::::::::::::SQ::::::: HVO_2908 ::::::::::::::::::::::::::::D::EL::::::::L::::::::::::::H::: Hbo2688 ::::::::::::::::::::::::::::D:::::::::::::::::::::::::::H::: consensus TFRRLREFRGYGRPILVSINRKNFLRDIAGR-STEEALPVSLAATSMAVERGAHVIRTHD #oth 113..11..2211.2.111..12..23311112.131.2.....121121...111.1.. rrnAC0246 M::::::::AFD::M:TAT::ED::G:L:DQPE::NQ:A:::::AT:EA:::::I::::: Hmu1089 :::::::::ALD::::::::::::::SL:D:::::G::::::::::::ID:::::V:::: NP3770A :::::::::A::::L:::::::::::::::::D::A:::::::::::::::::::::::: HQ2465A ::Q:::::::L:::::::::::::::S::D::::::::S:::::::L::::::::::::: hla1870 ::H:::::::::::L:::::::S::KT::::::::::::::::::::::::::::::::: VNG1344 ::D:::::::::Y:M:::::::::::E:::::D:AG:::::::::A:::::::::V:::: Hut0303 ::H::SD::EL:::M:::::::::::EFV::::::::::::::::AL::::::D:::A:: HVO_2908 ::D:::::::::Y::::::::::::::V:::::::::::::::::::::::::::V:::: Hbo2688 :L::::::::::::::::::::::::EV::::D::::::::::::::::::::::::::: consensus VAETRDAALIGHEFTRDRTR---T----SDVTVEELDVTTLREAARH--LDRLGADG--- #oth 12..2.113113114452551117323334554231222275234111123333456222 rrnAC0246 TR::H:VVKVADALGDE::T:::RPETD:GP::A::TDV::::V:::QA:GETV:G:::: Hmu1089 ::::L:::R::DA:GGSLL::::E::::ASLG:::::::NGM:V::::::EAVD::F::: NP3770A :::::::::V:::::PE:AN:::G::::--SGF:A:::::D::L::::::G:TVD:A::: HQ2465A :::::::::::DA::P::PSHHL:TDDD:Q::A:::::::SA::G:::::::::ISSMND hla1870 :::::::::V:A::A:::V::::SDDGP::IA::::::::V:::E::::::::D::Q::S VNG1344 :::::::::::::::P:::H::::::::--SHI:Q::::::PA:M::::A:::::::::: Hut0303 ::::::::I::::L------:::-::::-------------------::--------::: HVO_2908 :K::::::::::::E:R:V::::D:::PG::S::::::::TG::::::::::V::NR::D Hbo2688 :::::::::::K::A:H::::::K:::SG:::::::::::P::VE:::::::::VESPAS consensus -AADAVTRTFELDGLSDDAREALAAAAADTGVAVA-----------------GDGG---- #oth 435434644444611444335515332455346542122222221222222544632222 rrnAC0246 :TD:GA:L::L:GDVT::::AS:R:V:EV:D:V:V::::::::::::::::EK::::::: Hmu1089 DPE:GT::A:RITD:DPAG::S::::::::N:RI:::::::::::::::::::RFP:::: NP3770A :PEPS:LPHAVAF::PSGPAAY:GEQ:RTV:LETY::::::::::::::::H::R-:::: HQ2465A ITDNSIIH:L:I::::RS:VTE:STVT:KSDS::VTAVESESGREANLDSDSQSS::::: hla1870 V:G::AV::Y::R::T:E:VG::R::T:EP::GA:FALAGSDAAETAVPPSAT:::APTN VNG1344 ::::::A:AY:VT:::A:D:D::::----:::::S::::::::::::::::::TDP:::: Hut0303 :------------:VGPE:F:--------------:::::::::::::::::----:::: HVO_2908 L::ES:M:V:::E::GA:D::::E:::G:A:AVL:::::::::::::::::A::T::::: Hbo2688 I:TE::V:V::::::::EDVRT:::::G:A:AT::::::::::::::::::R:TTADGAD consensus ---LLLVGTAAALKALAAALADASDA-DAALEIITDGSR----- #oth 22264251234327556474545445356454555554434231 rrnAC0246 ::S:YVG:S:::::VVTDS::EDGHR:EL:G:LR:SL::RV::: Hmu1089 :::VVVF::PRS:TR:::M:D:SGRVG:VMNW:AN:V--::::: NP3770A ::::VV::::DGF:T:RT:IE:DA::PQR:S:A::EL:AQFGGV HQ2465A :::IF:A::P:S:D:I:TTVD:----:SVLT::L:SIT:QISR: hla1870 GESG:::::V:::S:VRS:VSGV:::L:::::S:D:::K::::: VNG1344 :::T:VA:::G::REAG:G::A:T:G::SV:ATLAEIF:TAGE: Hut0303 :::-----------------------:------------::::: HVO_2908 :::A:::::P:::AR:STLVT:::::LE::::TVERAT:::::: Hbo2688 SHCV::L:::R::CETV:FSEGE:ESLAT::HSVEN:VL:::::