[J] (RpsD) COG0522 Ribosomal protein S4 and related proteins 9 genomes BUD0396 9 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi VNG1133 rrnAC0059 HVO_2783 Hbo2519 Hmu1271 Hut0180 hla1422 NP2830A HQ2943A

Pairwise sequence scores
Consensus score	1305	VNG1133	hla1422	HQ2943A	HVO_2783	Hbo2519	NP2830A	Hut0180	rrnAC0059	Hmu1271
981	VNG1133	1270	891	860	902	882	953	900	907	876
1071	hla1422	891	1307	987	1018	992	992	892	863	896
1037	HQ2943A	860	987	1306	991	1055	932	838	872	855
1103	HVO_2783	902	1018	991	1309	1055	972	873	904	869
1110	Hbo2519	882	992	1055	1055	1322	1013	913	942	915
1080	NP2830A	953	992	932	972	1013	1302	984	912	944
1052	Hut0180	900	892	838	873	913	984	1260	964	962
1050	rrnAC0059	907	863	872	904	942	912	964	1285	1085
1042	Hmu1271	876	896	855	869	915	944	962	1085	1306

176 symbols
consensus       MAL-GSNTKFYETPNHPFQGERIADESDLLGRYGLKNKEELWRAQSELRSYRREARRLLG
#oth            .211.3...2.......1......2.32.111...1....1..1.....42.....1.1.
VNG1133         :::P:E:::::::::::Y::::::E:::::S::::::::::::::::::D::::::::::
hla1422         :ST::K:::G:::::::Y::::::E:::::S:::::::::F:::::::::M:::::::::
HQ2943A         :ST::::::R:::::::Y::::::Q:G::::::::::::::::T:::::E::::::::I:
HVO_2783        :TT::N::::::::::::::::::Q:::::S::::::::::::::::::NL:::::::::
Hbo2519         ::T::K::::::::::::::::::Q:A::::::::::::::::::::::N::::::::I:
NP2830A         ::::::::::::::::::::::::E:G:::S::::V:::::::::::::D::::::::I:
Hut0180         ::::::::::::::::::::::::::QS:I:Q::::::::::::::::::::::::K:::
rrnAC0059       ::::::::::::::::::::::::::AN:I:::::::::::::::::::G::::::K:::
Hmu1271         :::::::::::::::::Y::::::::QN:I::::::::::::::::::::::::::K:::

consensus       EAQGD-EEAEEEGEEFLARLRRYGILSEEDDLDDVLSLDVTDILERRLQTVAYRKGLANT
#oth            42211355445324..32.12.2.1.325151142.2.1.1.2....1..11..2.2131
VNG1133         QT---:--GTVS::::V:::Q:I::::::ER:::::::E:::V::::::::V::E:::::
hla1422         :::::VDV:Q:A:A::V:::::I:::GDN::ISA::::::::L:::::::::::Q:F:SS
HQ2943A         :::::VSV::AL:::::D:::::::::AD::ISK::G:::S:::::::::IV::Q:::S:
HVO_2783        :::::V::::SL:A::M::M:::::::A:::ISQT:R::::::::::F::::::::::Q:
Hbo2519         :::::M:Q:::L:V:::D::::::::::D:NISE::G::::::::::::::::::::GH:
NP2830A         :::::TVA:A:A:S::::::K:I:V:DD::S:::I::::::::::::::::::::::G::
Hut0180         G----:GGTA::S:::I:::K:::::D:G:A:::::::::::V:::::::::::::::::
rrnAC0059       S:---:G:H:T:S:::::::K:::::N:Q:Q:::::::::::V::::::::V::::Y:::
Hmu1271         R:E:-::GSRF:AD:::T::K:L:V:N:T:A:::::::::::V::::::::V::::Y:::

consensus       PQQARQFIVHGHVTVDGARVTRPSKKVEVDEEGAIAFDENSPLADELHPERAEAQE
#oth            34.1...12.1.111212.114.142.334313422...3.312.2...1..1311
VNG1133         MG:::::VS::::::::S:::E::YT:P:S::NTL::::T:D:T:::::A::G:::
hla1422         T:::::::::::I:::::::::::V::D::D::::::::::::::D:::::::S::
HQ2943A         :K::::::::E:I::N:::::::::M::ET:AN::::::::::::S:::A:::G::
HVO_2783        :::::::::::::::::::T:V::R:::::::DTV::::T:K::::::::::::::
Hbo2519         :D:S:::::::::V:::::::::::M:::S:::LVE:::G:::S:::::::::G::
NP2830A         ::::::::A::::::N::::SA::Y::D:A:::E:E:::T:::::D:::::::G:-
Hut0180         A:::::::S::::::::E::SI:::T:A:E:::::E:::::::::D:::::::ER-
rrnAC0059       :E::::::::::IVL:D::::::GMT::TAV:SSVG:::H:S:S::::::::::::
Hmu1271         :E::::::S:::IVLGD::::::GM:::A:A::EVG:::H::I:::::::::::::